Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02391:Ssmem1'

293849

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ssmem1

Ensembl Gene

ENSMUSG00000029784

Gene Name

serine-rich single-pass membrane protein 1

Synonyms

1700016K02Rik, 1700025E21Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.092) question?

Stock #

IGL02391

Quality Score

Status

Chromosome

Chromosomal Location

30509848-30520253 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 30512441 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 28 (E28G)

Ref Sequence

ENSEMBL: ENSMUSP00000031798 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031797] [ENSMUST00000031798] [ENSMUST00000064330] [ENSMUST00000102991] [ENSMUST00000115157] [ENSMUST00000115160] [ENSMUST00000131485] [ENSMUST00000154547] [ENSMUST00000148638] [ENSMUST00000151187] [ENSMUST00000138823]

AlphaFold

Q9D9Y8

Predicted Effect

probably benign
Transcript: ENSMUST00000031797

SMART Domains

Protein: ENSMUSP00000031797
Gene: ENSMUSG00000029784

Domain	Start	End	E-Value	Type
Pfam:DUF4636	1	195	3.5e-100	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000031798
AA Change: E28G

PolyPhen 2 Score 0.847 (Sensitivity: 0.83; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000031798
Gene: ENSMUSG00000029784
AA Change: E28G

Domain	Start	End	E-Value	Type
Pfam:DUF4636	1	243	1e-144	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000064330

SMART Domains

Protein: ENSMUSP00000067667
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	5	343	4.1e-88	PFAM
Pfam:CytochromB561_N	341	438	2.2e-46	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000102991

SMART Domains

Protein: ENSMUSP00000100056
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	5	376	5.2e-107	PFAM
Pfam:CytochromB561_N	372	519	3.1e-79	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000115157

SMART Domains

Protein: ENSMUSP00000110810
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	4	560	4.8e-209	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000115160

SMART Domains

Protein: ENSMUSP00000110813
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	6	560	6.4e-159	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000131485

SMART Domains

Protein: ENSMUSP00000122018
Gene: ENSMUSG00000029784

Domain	Start	End	E-Value	Type
Pfam:DUF4636	1	67	4.2e-32	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000154547

SMART Domains

Protein: ENSMUSP00000145248
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
low complexity region	3	22	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000150480

Predicted Effect

probably benign
Transcript: ENSMUST00000148638

SMART Domains

Protein: ENSMUSP00000115567
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	4	71	1.3e-15	PFAM
Pfam:CytochromB561_N	67	139	1.4e-8	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000151187

SMART Domains

Protein: ENSMUSP00000138232
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	1	403	1.5e-160	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000138823

SMART Domains

Protein: ENSMUSP00000138292
Gene: ENSMUSG00000029782

Domain	Start	End	E-Value	Type
Pfam:CytochromB561_N	5	560	1.2e-205	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 44 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc4	T	A	14: 118,790,764 (GRCm39)	N748Y	probably damaging	Het
Actbl2	A	G	13: 111,391,701 (GRCm39)	D12G	possibly damaging	Het
Adamts10	T	C	17: 33,747,785 (GRCm39)	S74P	probably benign	Het
Adprs	C	T	4: 126,211,701 (GRCm39)		probably benign	Het
Amn1	A	G	6: 149,070,944 (GRCm39)		probably null	Het
Antxr1	A	T	6: 87,264,038 (GRCm39)	I144N	probably damaging	Het
Atp2a3	C	A	11: 72,866,165 (GRCm39)	H262N	probably benign	Het
Cabp5	A	T	7: 13,132,269 (GRCm39)	R13*	probably null	Het
Cacna1e	A	G	1: 154,296,859 (GRCm39)	Y1669H	probably damaging	Het
Ccdc174	A	G	6: 91,875,263 (GRCm39)	E364G	possibly damaging	Het
Ccdc18	C	T	5: 108,283,918 (GRCm39)	P74S	probably damaging	Het
Clec3a	C	T	8: 115,152,240 (GRCm39)	S82L	probably benign	Het
Cnih3	A	G	1: 181,234,078 (GRCm39)	D43G	probably damaging	Het
Dpp10	G	A	1: 123,578,087 (GRCm39)	T128M	probably damaging	Het
Edar	A	T	10: 58,464,403 (GRCm39)	F79I	probably damaging	Het
Eif2ak4	T	A	2: 118,251,272 (GRCm39)	H199Q	probably benign	Het
Fermt1	A	G	2: 132,783,871 (GRCm39)	L46P	probably damaging	Het
Glipr1	A	G	10: 111,824,799 (GRCm39)		probably benign	Het
Gsdmc	T	C	15: 63,675,428 (GRCm39)	N129S	probably damaging	Het
Ift88	T	C	14: 57,718,871 (GRCm39)	S619P	possibly damaging	Het
Itga9	T	A	9: 118,679,873 (GRCm39)	V262E	probably benign	Het
Med17	G	A	9: 15,188,963 (GRCm39)	R101*	probably null	Het
Mta1	T	A	12: 113,100,203 (GRCm39)	I688N	possibly damaging	Het
Muc4	A	T	16: 32,570,894 (GRCm39)	R651S	probably benign	Het
Opcml	A	G	9: 28,586,560 (GRCm39)	I93V	probably damaging	Het
Or12d17	C	T	17: 37,777,477 (GRCm39)	P127S	probably damaging	Het
Or13p4	A	G	4: 118,547,538 (GRCm39)	L37P	probably damaging	Het
Or9r7	A	G	10: 129,962,773 (GRCm39)	V51A	possibly damaging	Het
Parg	T	G	14: 31,984,638 (GRCm39)		probably null	Het
Rps3a3	A	G	13: 108,807,417 (GRCm39)		probably benign	Het
Safb	T	A	17: 56,907,813 (GRCm39)		probably benign	Het
Sat2	G	T	11: 69,513,575 (GRCm39)	C54F	probably damaging	Het
Scin	T	A	12: 40,127,530 (GRCm39)	Y420F	probably benign	Het
Slc22a29	A	T	19: 8,146,717 (GRCm39)	S362T	probably benign	Het
Smchd1	T	C	17: 71,738,254 (GRCm39)	D537G	probably null	Het
Spred3	A	G	7: 28,865,830 (GRCm39)	S126P	probably benign	Het
Ssh1	C	T	5: 114,080,578 (GRCm39)	E951K	probably damaging	Het
Stox1	A	T	10: 62,495,455 (GRCm39)		probably benign	Het
Syn3	T	C	10: 85,900,770 (GRCm39)	I373V	probably benign	Het
Tecrl	A	T	5: 83,502,674 (GRCm39)	F58L	probably benign	Het
Trp53bp1	T	C	2: 121,033,191 (GRCm39)	N1655S	possibly damaging	Het
Usp2	G	T	9: 44,002,524 (GRCm39)	Q147H	probably damaging	Het
Usp24	T	A	4: 106,264,326 (GRCm39)	N1751K	possibly damaging	Het
Wipf1	T	A	2: 73,264,487 (GRCm39)	D438V	probably damaging	Het

Other mutations in Ssmem1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0070:Ssmem1	UTSW	6	30,519,420 (GRCm39)	missense	possibly damaging	0.92
R0110:Ssmem1	UTSW	6	30,519,547 (GRCm39)	splice site	probably null
R0469:Ssmem1	UTSW	6	30,519,547 (GRCm39)	splice site	probably null
R0510:Ssmem1	UTSW	6	30,519,547 (GRCm39)	splice site	probably null
R1544:Ssmem1	UTSW	6	30,519,650 (GRCm39)	missense	probably damaging	1.00
R1629:Ssmem1	UTSW	6	30,512,491 (GRCm39)	missense	possibly damaging	0.93
R1656:Ssmem1	UTSW	6	30,517,507 (GRCm39)	missense	probably damaging	1.00
R2351:Ssmem1	UTSW	6	30,512,495 (GRCm39)	missense	possibly damaging	0.71
R4713:Ssmem1	UTSW	6	30,519,513 (GRCm39)	missense	probably damaging	0.99
R6301:Ssmem1	UTSW	6	30,519,758 (GRCm39)	missense	probably damaging	0.99
R9740:Ssmem1	UTSW	6	30,512,454 (GRCm39)	missense	possibly damaging	0.84

Posted On

2015-04-16