Incidental Mutation 'IGL02491:Vnn3'
ID 295665
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vnn3
Ensembl Gene ENSMUSG00000020010
Gene Name vanin 3
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.055) question?
Stock # IGL02491
Quality Score
Status
Chromosome 10
Chromosomal Location 23727360-23745741 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 23741816 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Threonine at position 374 (S374T)
Ref Sequence ENSEMBL: ENSMUSP00000020190 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020190]
AlphaFold Q9QZ25
Predicted Effect probably benign
Transcript: ENSMUST00000020190
AA Change: S374T

PolyPhen 2 Score 0.109 (Sensitivity: 0.93; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000020190
Gene: ENSMUSG00000020010
AA Change: S374T

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:CN_hydrolase 51 296 6.9e-19 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 55 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca6 T C 11: 110,067,794 (GRCm39) probably benign Het
Acacb T A 5: 114,330,166 (GRCm39) I443N probably damaging Het
C1qtnf3 A T 15: 10,972,067 (GRCm39) I118F possibly damaging Het
Carmil3 C T 14: 55,741,974 (GRCm39) A1148V probably benign Het
Ccdc62 A T 5: 124,099,378 (GRCm39) S677C probably damaging Het
Cdc45 C T 16: 18,617,479 (GRCm39) M200I probably benign Het
Col11a2 C A 17: 34,283,181 (GRCm39) probably benign Het
Cpsf7 A G 19: 10,517,001 (GRCm39) I368V possibly damaging Het
Csmd2 T C 4: 128,428,050 (GRCm39) S2934P probably benign Het
Csmd3 A G 15: 47,777,511 (GRCm39) probably benign Het
Cubn A G 2: 13,326,039 (GRCm39) Y2709H probably damaging Het
Cyp2d12 T A 15: 82,442,682 (GRCm39) L375Q possibly damaging Het
Etv4 A T 11: 101,674,791 (GRCm39) probably null Het
Exph5 T A 9: 53,286,343 (GRCm39) D1141E possibly damaging Het
Fbxo16 T A 14: 65,558,736 (GRCm39) H298Q probably benign Het
Fbxw21 T A 9: 108,972,887 (GRCm39) Y349F probably benign Het
Foxs1 G A 2: 152,774,721 (GRCm39) R111C probably damaging Het
Galnt15 T A 14: 31,778,273 (GRCm39) L436Q probably damaging Het
Gbf1 T C 19: 46,250,979 (GRCm39) probably benign Het
Gm8237 A T 14: 5,863,577 (GRCm38) C29* probably null Het
Hcn1 A G 13: 117,946,576 (GRCm39) D317G unknown Het
Itgam A G 7: 127,715,190 (GRCm39) N877D possibly damaging Het
Kcnma1 T C 14: 23,361,757 (GRCm39) R1047G probably damaging Het
Klhdc3 T C 17: 46,988,226 (GRCm39) R180G possibly damaging Het
Lpcat2 T C 8: 93,600,879 (GRCm39) V241A probably damaging Het
Mnat1 A G 12: 73,170,682 (GRCm39) N24S probably null Het
Mprip A G 11: 59,660,857 (GRCm39) T967A probably benign Het
Mtf1 T C 4: 124,732,372 (GRCm39) F477L probably benign Het
Naaladl1 A G 19: 6,159,748 (GRCm39) E393G possibly damaging Het
Or10ak7 A T 4: 118,791,358 (GRCm39) L229H probably damaging Het
Or2at1 A G 7: 99,416,540 (GRCm39) E57G possibly damaging Het
Or5e1 A G 7: 108,354,321 (GRCm39) K86R probably damaging Het
Pcdhb6 A T 18: 37,468,735 (GRCm39) D552V probably damaging Het
Pglyrp3 C T 3: 91,921,944 (GRCm39) S4F possibly damaging Het
Pramel13 A T 4: 144,121,322 (GRCm39) M234K probably damaging Het
Prss27 A T 17: 24,263,229 (GRCm39) probably benign Het
Slc5a9 A G 4: 111,753,549 (GRCm39) S51P probably damaging Het
Slc6a4 A G 11: 76,918,034 (GRCm39) Y592C probably damaging Het
Slc7a13 T A 4: 19,841,404 (GRCm39) V417D probably damaging Het
Spring1 T C 5: 118,397,160 (GRCm39) Y130H probably benign Het
Syne2 A G 12: 76,118,953 (GRCm39) T5857A probably benign Het
Thap1 A C 8: 26,650,885 (GRCm39) S52R probably damaging Het
Thsd4 T C 9: 59,907,301 (GRCm39) N158S probably damaging Het
Tmem147 A T 7: 30,427,626 (GRCm39) probably benign Het
Trdmt1 G A 2: 13,521,483 (GRCm39) A311V probably benign Het
U2surp T A 9: 95,372,273 (GRCm39) R296S probably damaging Het
Upf2 A G 2: 6,030,975 (GRCm39) D805G unknown Het
Usp34 T A 11: 23,382,630 (GRCm39) H2057Q probably damaging Het
Vmn2r110 T A 17: 20,816,400 (GRCm39) D41V probably damaging Het
Vmn2r16 T A 5: 109,487,703 (GRCm39) L192* probably null Het
Wdr62 A C 7: 29,942,184 (GRCm39) D1089E probably benign Het
Xdh T A 17: 74,193,459 (GRCm39) D1279V probably damaging Het
Zfp13 C T 17: 23,795,072 (GRCm39) A493T probably benign Het
Zfp518b A G 5: 38,831,123 (GRCm39) I294T possibly damaging Het
Zfp983 G A 17: 21,876,528 (GRCm39) probably null Het
Other mutations in Vnn3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00675:Vnn3 APN 10 23,743,066 (GRCm39) missense possibly damaging 0.77
IGL01300:Vnn3 APN 10 23,740,263 (GRCm39) missense possibly damaging 0.87
IGL01349:Vnn3 APN 10 23,727,814 (GRCm39) missense probably damaging 0.99
IGL03256:Vnn3 APN 10 23,727,698 (GRCm39) splice site probably benign
IGL03289:Vnn3 APN 10 23,741,735 (GRCm39) missense possibly damaging 0.92
IGL02799:Vnn3 UTSW 10 23,727,869 (GRCm39) missense possibly damaging 0.64
R0599:Vnn3 UTSW 10 23,741,603 (GRCm39) missense possibly damaging 0.94
R1703:Vnn3 UTSW 10 23,741,828 (GRCm39) missense probably benign
R1753:Vnn3 UTSW 10 23,741,718 (GRCm39) missense probably benign 0.27
R2119:Vnn3 UTSW 10 23,740,311 (GRCm39) missense probably damaging 1.00
R2288:Vnn3 UTSW 10 23,740,354 (GRCm39) missense probably benign 0.03
R4255:Vnn3 UTSW 10 23,741,720 (GRCm39) missense probably benign 0.18
R4458:Vnn3 UTSW 10 23,741,567 (GRCm39) missense probably benign 0.23
R4518:Vnn3 UTSW 10 23,743,124 (GRCm39) missense possibly damaging 0.77
R4545:Vnn3 UTSW 10 23,732,224 (GRCm39) missense probably benign 0.00
R4723:Vnn3 UTSW 10 23,727,589 (GRCm39) missense possibly damaging 0.88
R4791:Vnn3 UTSW 10 23,740,519 (GRCm39) missense probably benign
R4921:Vnn3 UTSW 10 23,740,473 (GRCm39) missense probably benign 0.01
R5152:Vnn3 UTSW 10 23,740,237 (GRCm39) missense probably benign 0.01
R5390:Vnn3 UTSW 10 23,727,483 (GRCm39) start codon destroyed probably null 1.00
R5545:Vnn3 UTSW 10 23,742,992 (GRCm39) missense probably benign 0.00
R6197:Vnn3 UTSW 10 23,732,187 (GRCm39) missense probably damaging 1.00
R6751:Vnn3 UTSW 10 23,745,523 (GRCm39) missense probably benign 0.00
R6846:Vnn3 UTSW 10 23,727,620 (GRCm39) missense probably benign
R6917:Vnn3 UTSW 10 23,741,832 (GRCm39) missense possibly damaging 0.50
R7073:Vnn3 UTSW 10 23,740,311 (GRCm39) missense probably damaging 1.00
R7100:Vnn3 UTSW 10 23,741,840 (GRCm39) missense probably damaging 1.00
R7152:Vnn3 UTSW 10 23,727,513 (GRCm39) missense possibly damaging 0.88
R7336:Vnn3 UTSW 10 23,727,806 (GRCm39) missense probably benign 0.42
R7421:Vnn3 UTSW 10 23,741,666 (GRCm39) missense probably benign 0.06
R7875:Vnn3 UTSW 10 23,743,146 (GRCm39) missense possibly damaging 0.80
R8353:Vnn3 UTSW 10 23,745,443 (GRCm39) missense probably benign 0.01
R8453:Vnn3 UTSW 10 23,745,443 (GRCm39) missense probably benign 0.01
R8465:Vnn3 UTSW 10 23,741,780 (GRCm39) missense possibly damaging 0.67
R9105:Vnn3 UTSW 10 23,740,461 (GRCm39) missense probably damaging 1.00
R9261:Vnn3 UTSW 10 23,741,607 (GRCm39) missense probably damaging 0.97
R9441:Vnn3 UTSW 10 23,740,498 (GRCm39) missense possibly damaging 0.94
R9718:Vnn3 UTSW 10 23,745,454 (GRCm39) nonsense probably null
R9737:Vnn3 UTSW 10 23,741,813 (GRCm39) missense probably benign 0.02
Posted On 2015-04-16