Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02499:Brap'

295965

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Brap

Ensembl Gene

ENSMUSG00000029458

Gene Name

BRCA1 associated protein

Synonyms

3010002G07Rik

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

IGL02499

Quality Score

Status

Chromosome

Chromosomal Location

121798626-121825312 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 121817934 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 358 (Y358C)

Ref Sequence

ENSEMBL: ENSMUSP00000107395 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031414] [ENSMUST00000111765] [ENSMUST00000140996] [ENSMUST00000195952]

AlphaFold

Q99MP8

Predicted Effect

probably damaging
Transcript: ENSMUST00000031414
AA Change: Y388C

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000031414
Gene: ENSMUSG00000029458
AA Change: Y388C

Domain	Start	End	E-Value	Type
Pfam:BRAP2	153	251	3.7e-38	PFAM
RING	263	302	7.92e-8	SMART
ZnF_UBP	315	364	1.68e-25	SMART
coiled coil region	430	535	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000111765
AA Change: Y358C

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000107395
Gene: ENSMUSG00000029458
AA Change: Y358C

Domain	Start	End	E-Value	Type
Pfam:BRAP2	117	226	3.5e-41	PFAM
RING	233	272	3.7e-10	SMART
ZnF_UBP	285	334	1.1e-27	SMART
coiled coil region	400	505	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000127703

SMART Domains

Protein: ENSMUSP00000118574
Gene: ENSMUSG00000029458

Domain	Start	End	E-Value	Type
Pfam:BRAP2	1	39	6.3e-13	PFAM
RING	46	85	7.92e-8	SMART
ZnF_UBP	98	147	1.68e-25	SMART
coiled coil region	213	318	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000140996

Predicted Effect

probably benign
Transcript: ENSMUST00000195952

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000196897

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene was identified by its ability to bind to the nuclear localization signal of BRCA1 and other proteins. It is a cytoplasmic protein which may regulate nuclear targeting by retaining proteins with a nuclear localization signal in the cytoplasm. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit embryonic lethality during organogenesis and subtle defects in cell cycle-dependent nuclear movement in neural progenitors. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A930011G23Rik	A	G	5: 99,377,236 (GRCm39)	S404P	probably damaging	Het
A930011G23Rik	G	A	5: 99,377,241 (GRCm39)	P402L	probably damaging	Het
Abcb1a	A	G	5: 8,776,807 (GRCm39)	N835S	possibly damaging	Het
Abr	A	T	11: 76,399,916 (GRCm39)	F27Y	probably benign	Het
Adam5	C	T	8: 25,271,581 (GRCm39)		probably null	Het
Alas1	A	T	9: 106,118,520 (GRCm39)	Y201N	probably damaging	Het
Aldoart1	T	A	4: 72,770,476 (GRCm39)	R111W	possibly damaging	Het
Arhgef25	A	G	10: 127,021,460 (GRCm39)	Y253H	probably damaging	Het
Arhgef28	G	T	13: 98,090,291 (GRCm39)	A1076E	possibly damaging	Het
Baz2b	C	T	2: 59,731,840 (GRCm39)	R2066K	possibly damaging	Het
Bdh1	G	T	16: 31,256,866 (GRCm39)	R5L	possibly damaging	Het
Cad	T	C	5: 31,226,948 (GRCm39)	V1235A	probably damaging	Het
Cadps	G	T	14: 12,822,725 (GRCm38)	S5*	probably null	Het
Cd200r2	A	G	16: 44,734,948 (GRCm39)	T220A	possibly damaging	Het
Cd209e	T	A	8: 3,904,238 (GRCm39)	M6L	probably benign	Het
Cdh23	G	T	10: 60,220,958 (GRCm39)	T1265K	probably damaging	Het
Clec16a	T	C	16: 10,512,540 (GRCm39)	S828P	probably benign	Het
Dao	A	G	5: 114,152,002 (GRCm39)	K107E	possibly damaging	Het
Dnah6	T	A	6: 72,998,210 (GRCm39)	M4071L	probably benign	Het
Dvl1	T	C	4: 155,939,237 (GRCm39)	I250T	probably benign	Het
Dzip3	A	C	16: 48,754,213 (GRCm39)	L945V	probably damaging	Het
Gm128	A	G	3: 95,147,992 (GRCm39)	S101P	possibly damaging	Het
Gphn	T	C	12: 78,539,074 (GRCm39)	L240P	probably benign	Het
Hecw2	A	G	1: 53,965,647 (GRCm39)	I393T	probably benign	Het
Iigp1c	T	C	18: 60,378,710 (GRCm39)	S82P	probably damaging	Het
Kat14	A	G	2: 144,235,751 (GRCm39)	E161G	probably benign	Het
Kcne3	A	C	7: 99,833,610 (GRCm39)	I76L	probably benign	Het
Kcnk18	A	T	19: 59,223,614 (GRCm39)	Q253L	probably benign	Het
Kmt2a	T	C	9: 44,741,806 (GRCm39)		probably benign	Het
Lrrc73	A	G	17: 46,567,915 (GRCm39)		probably benign	Het
Mki67	A	G	7: 135,296,056 (GRCm39)	S2993P	possibly damaging	Het
Mto1	T	A	9: 78,368,794 (GRCm39)		probably benign	Het
Myo9a	T	A	9: 59,722,669 (GRCm39)		probably benign	Het
Myt1	G	A	2: 181,467,342 (GRCm39)		probably benign	Het
Ncoa7	T	C	10: 30,566,885 (GRCm39)	T587A	probably benign	Het
Nemf	T	A	12: 69,368,903 (GRCm39)	I771F	probably damaging	Het
Or10k2	T	A	8: 84,267,812 (GRCm39)	V13D	possibly damaging	Het
Or5k16	A	G	16: 58,736,614 (GRCm39)	L130P	probably damaging	Het
Or8c10	A	T	9: 38,278,977 (GRCm39)	Y45F	probably benign	Het
Papln	T	C	12: 83,827,445 (GRCm39)	V761A	probably benign	Het
Pask	A	T	1: 93,248,817 (GRCm39)	L861*	probably null	Het
Pcdh18	T	A	3: 49,707,896 (GRCm39)	R859S	probably benign	Het
Ppip5k1	C	T	2: 121,162,034 (GRCm39)		probably null	Het
Ptprs	A	G	17: 56,744,884 (GRCm39)	V284A	probably damaging	Het
Rasgrp4	A	T	7: 28,850,928 (GRCm39)		probably benign	Het
Rp1	T	C	1: 4,419,271 (GRCm39)	I614V	probably benign	Het
Sec23ip	T	C	7: 128,378,640 (GRCm39)	I818T	probably damaging	Het
Skint11	G	A	4: 114,051,801 (GRCm39)	A50T	probably benign	Het
Sqor	T	A	2: 122,650,007 (GRCm39)	M417K	possibly damaging	Het
Tbc1d24	T	C	17: 24,426,593 (GRCm39)		probably null	Het
Tbc1d8b	A	T	X: 138,613,173 (GRCm39)	D333V	probably damaging	Het
Tbx2	T	C	11: 85,731,739 (GRCm39)	S679P	possibly damaging	Het
Thbs2	A	G	17: 14,904,328 (GRCm39)		probably benign	Het
Ttn	T	C	2: 76,689,795 (GRCm39)		probably benign	Het
Vmn2r28	A	T	7: 5,493,568 (GRCm39)	I126N	probably damaging	Het
Zbtb10	G	T	3: 9,316,800 (GRCm39)	G204V	probably damaging	Het
Zfp426	A	C	9: 20,384,414 (GRCm39)		probably benign	Het

Other mutations in Brap

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00823:Brap	APN	5	121,803,290 (GRCm39)	missense	probably damaging	1.00
IGL01672:Brap	APN	5	121,816,908 (GRCm39)	unclassified	probably benign
IGL01889:Brap	APN	5	121,798,881 (GRCm39)	missense	probably benign	0.00
IGL01977:Brap	APN	5	121,816,910 (GRCm39)	unclassified	probably benign
IGL01978:Brap	APN	5	121,816,910 (GRCm39)	unclassified	probably benign
IGL01996:Brap	APN	5	121,816,910 (GRCm39)	unclassified	probably benign
IGL03137:Brap	APN	5	121,803,156 (GRCm39)	splice site	probably benign
R1185:Brap	UTSW	5	121,813,342 (GRCm39)	missense	probably damaging	1.00
R1185:Brap	UTSW	5	121,813,342 (GRCm39)	missense	probably damaging	1.00
R1185:Brap	UTSW	5	121,813,342 (GRCm39)	missense	probably damaging	1.00
R1624:Brap	UTSW	5	121,820,922 (GRCm39)	missense	possibly damaging	0.65
R1709:Brap	UTSW	5	121,803,353 (GRCm39)	critical splice donor site	probably null
R2056:Brap	UTSW	5	121,801,529 (GRCm39)	missense	probably damaging	1.00
R2109:Brap	UTSW	5	121,801,422 (GRCm39)	missense	possibly damaging	0.63
R3196:Brap	UTSW	5	121,803,259 (GRCm39)	missense	possibly damaging	0.70
R4591:Brap	UTSW	5	121,800,113 (GRCm39)	missense	probably null	1.00
R4744:Brap	UTSW	5	121,800,193 (GRCm39)	missense	probably damaging	1.00
R4924:Brap	UTSW	5	121,803,318 (GRCm39)	missense	probably damaging	1.00
R5000:Brap	UTSW	5	121,800,089 (GRCm39)	nonsense	probably null
R5702:Brap	UTSW	5	121,803,206 (GRCm39)	missense	probably damaging	1.00
R5893:Brap	UTSW	5	121,817,405 (GRCm39)	nonsense	probably null
R6244:Brap	UTSW	5	121,803,372 (GRCm39)	missense	probably benign	0.02
R6266:Brap	UTSW	5	121,823,328 (GRCm39)	missense	probably benign	0.00
R6726:Brap	UTSW	5	121,813,365 (GRCm39)	missense	probably damaging	1.00
R7765:Brap	UTSW	5	121,800,192 (GRCm39)	missense	probably damaging	1.00
R7995:Brap	UTSW	5	121,820,909 (GRCm39)	missense	probably benign
R8385:Brap	UTSW	5	121,823,197 (GRCm39)	missense	probably benign	0.05
R8465:Brap	UTSW	5	121,817,358 (GRCm39)	nonsense	probably null
R8809:Brap	UTSW	5	121,822,524 (GRCm39)	missense	possibly damaging	0.78
R8827:Brap	UTSW	5	121,810,261 (GRCm39)	missense	probably benign	0.00
R9191:Brap	UTSW	5	121,823,350 (GRCm39)	missense	probably benign	0.01
R9631:Brap	UTSW	5	121,822,435 (GRCm39)	missense	probably benign	0.16
R9705:Brap	UTSW	5	121,801,373 (GRCm39)	missense	probably benign
X0003:Brap	UTSW	5	121,817,319 (GRCm39)	missense	probably damaging	1.00
Z1176:Brap	UTSW	5	121,813,440 (GRCm39)	missense	possibly damaging	0.78

Posted On

2015-04-16