Incidental Mutation 'IGL02501:Phex'
ID 296046
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Phex
Ensembl Gene ENSMUSG00000057457
Gene Name phosphate regulating endopeptidase homolog, X-linked
Synonyms HPDR1
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.474) question?
Stock # IGL02501
Quality Score
Status
Chromosome X
Chromosomal Location 155945071-156198282 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 155969271 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Proline at position 568 (S568P)
Ref Sequence ENSEMBL: ENSMUSP00000078863 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000079945]
AlphaFold P70669
Predicted Effect probably damaging
Transcript: ENSMUST00000079945
AA Change: S568P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000078863
Gene: ENSMUSG00000057457
AA Change: S568P

DomainStartEndE-ValueType
transmembrane domain 21 40 N/A INTRINSIC
Pfam:Peptidase_M13_N 77 479 6.1e-95 PFAM
Pfam:Peptidase_M13 538 748 3.5e-70 PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a transmembrane endopeptidase that belongs to the type II integral membrane zinc-dependent endopeptidase family. The protein is thought to be involved in bone and dentin mineralization and renal phosphate reabsorption. Mutations in this gene cause X-linked hypophosphatemic rickets. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2013]
PHENOTYPE: Males hemizygous for a null mutation exhibit reduced body size, shortened hindlimbs and tail, osteomalacia, and markedly reduced plasma phosphate levels due to impaired kidney reabsorption. Female heterozygotes exhibit milder symptoms. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adad1 A T 3: 37,137,489 (GRCm39) I307F probably damaging Het
Adam15 G A 3: 89,247,769 (GRCm39) A789V possibly damaging Het
Bspry A G 4: 62,414,672 (GRCm39) T422A probably benign Het
Btnl6 T A 17: 34,734,648 (GRCm39) D38V possibly damaging Het
Cd59b G A 2: 103,909,273 (GRCm39) C18Y probably damaging Het
Clstn1 T G 4: 149,716,299 (GRCm39) I255R probably damaging Het
Dpp10 A G 1: 123,613,999 (GRCm39) L99P possibly damaging Het
Efr3b C T 12: 4,033,391 (GRCm39) V139I probably benign Het
Emc1 A T 4: 139,098,295 (GRCm39) T759S probably benign Het
Fndc1 C T 17: 7,984,230 (GRCm39) G1232E unknown Het
Gjb3 C T 4: 127,220,157 (GRCm39) G125D probably damaging Het
Helb A G 10: 119,938,693 (GRCm39) S594P possibly damaging Het
Hycc2 C A 1: 58,579,350 (GRCm39) R229L probably damaging Het
Ildr1 T C 16: 36,542,712 (GRCm39) S371P probably damaging Het
Kif1b T A 4: 149,299,433 (GRCm39) R946W probably damaging Het
Lrp12 T C 15: 39,741,300 (GRCm39) T472A probably damaging Het
Lyst A G 13: 13,886,230 (GRCm39) D3031G probably benign Het
Med12l A T 3: 59,169,397 (GRCm39) T1596S possibly damaging Het
Myom1 A C 17: 71,379,076 (GRCm39) probably null Het
Nhlrc2 T A 19: 56,559,086 (GRCm39) Y190* probably null Het
Nol4 A T 18: 22,956,398 (GRCm39) N115K probably damaging Het
Nrg1 T A 8: 32,308,291 (GRCm39) probably null Het
Or7g26 T A 9: 19,229,999 (GRCm39) H56Q probably damaging Het
Oxld1 A C 11: 120,347,714 (GRCm39) L161R probably damaging Het
Pkd1 T G 17: 24,788,673 (GRCm39) S810R probably benign Het
Plin2 G T 4: 86,582,723 (GRCm39) C84* probably null Het
Ppfia3 A T 7: 45,004,362 (GRCm39) probably benign Het
Ptpn14 A G 1: 189,582,587 (GRCm39) N478S probably benign Het
Pygl A G 12: 70,237,908 (GRCm39) M801T probably benign Het
Recql5 A G 11: 115,785,917 (GRCm39) Y619H probably benign Het
Scn3a C A 2: 65,356,899 (GRCm39) D182Y possibly damaging Het
Serpinb6e T C 13: 34,016,785 (GRCm39) E316G possibly damaging Het
Shroom4 A G X: 6,495,998 (GRCm39) E386G possibly damaging Het
Slc4a2 A G 5: 24,634,432 (GRCm39) S24G probably benign Het
Slc4a4 A G 5: 89,277,508 (GRCm39) I282V probably benign Het
Slc8b1 C T 5: 120,658,918 (GRCm39) R148C probably damaging Het
Stag2 A G X: 41,360,202 (GRCm39) probably benign Het
Styx T A 14: 45,609,922 (GRCm39) H195Q probably benign Het
Sufu A G 19: 46,439,349 (GRCm39) I190V probably benign Het
Svep1 A G 4: 58,145,341 (GRCm39) probably benign Het
Tbc1d31 T C 15: 57,801,344 (GRCm39) I293T probably benign Het
Timp4 T A 6: 115,223,444 (GRCm39) I160F probably damaging Het
Tmem87a A T 2: 120,234,534 (GRCm39) V3E probably damaging Het
Utp4 T A 8: 107,632,873 (GRCm39) H285Q probably benign Het
Vrk1 T G 12: 106,028,912 (GRCm39) S305A probably benign Het
Zfp329 G T 7: 12,545,106 (GRCm39) H139Q possibly damaging Het
Other mutations in Phex
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00777:Phex APN X 155,960,528 (GRCm39) missense probably damaging 1.00
IGL02176:Phex APN X 156,051,489 (GRCm39) missense probably damaging 1.00
IGL02502:Phex APN X 155,966,823 (GRCm39) missense possibly damaging 0.93
IGL03214:Phex APN X 155,960,500 (GRCm39) missense probably damaging 0.99
IGL03218:Phex APN X 155,961,783 (GRCm39) missense probably damaging 1.00
R0240:Phex UTSW X 155,969,214 (GRCm39) missense probably damaging 1.00
R0240:Phex UTSW X 155,969,214 (GRCm39) missense probably damaging 1.00
R0726:Phex UTSW X 156,155,557 (GRCm39) splice site probably benign
R2888:Phex UTSW X 156,093,954 (GRCm39) missense probably benign 0.00
R2889:Phex UTSW X 156,093,954 (GRCm39) missense probably benign 0.00
R2890:Phex UTSW X 156,093,954 (GRCm39) missense probably benign 0.00
Z1177:Phex UTSW X 156,192,960 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16