Incidental Mutation 'IGL02513:Ccdc9'
ID 296657
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ccdc9
Ensembl Gene ENSMUSG00000041375
Gene Name coiled-coil domain containing 9
Synonyms 2600011L02Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.060) question?
Stock # IGL02513
Quality Score
Status
Chromosome 7
Chromosomal Location 16007967-16020720 bp(-) (GRCm39)
Type of Mutation utr 5 prime
DNA Base Change (assembly) A to G at 16018434 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000133798 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000041010] [ENSMUST00000118976] [ENSMUST00000145519] [ENSMUST00000146609] [ENSMUST00000150528] [ENSMUST00000174270] [ENSMUST00000148741]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000041010
SMART Domains Protein: ENSMUSP00000035597
Gene: ENSMUSG00000041375

DomainStartEndE-ValueType
coiled coil region 5 52 N/A INTRINSIC
low complexity region 75 95 N/A INTRINSIC
low complexity region 121 135 N/A INTRINSIC
coiled coil region 150 184 N/A INTRINSIC
Pfam:DUF4594 203 378 1.1e-63 PFAM
coiled coil region 425 453 N/A INTRINSIC
low complexity region 490 507 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000118976
SMART Domains Protein: ENSMUSP00000114088
Gene: ENSMUSG00000041375

DomainStartEndE-ValueType
coiled coil region 5 52 N/A INTRINSIC
low complexity region 75 95 N/A INTRINSIC
low complexity region 121 135 N/A INTRINSIC
coiled coil region 150 184 N/A INTRINSIC
Pfam:DUF4594 204 375 6.3e-57 PFAM
coiled coil region 425 453 N/A INTRINSIC
low complexity region 490 507 N/A INTRINSIC
low complexity region 535 549 N/A INTRINSIC
low complexity region 580 588 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124084
Predicted Effect noncoding transcript
Transcript: ENSMUST00000129447
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137993
Predicted Effect noncoding transcript
Transcript: ENSMUST00000144186
Predicted Effect probably benign
Transcript: ENSMUST00000145519
Predicted Effect probably benign
Transcript: ENSMUST00000146609
Predicted Effect probably benign
Transcript: ENSMUST00000150528
Predicted Effect probably benign
Transcript: ENSMUST00000174270
SMART Domains Protein: ENSMUSP00000133798
Gene: ENSMUSG00000041375

DomainStartEndE-ValueType
coiled coil region 5 52 N/A INTRINSIC
low complexity region 75 95 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000148741
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 31 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Apob G T 12: 8,042,979 (GRCm39) V787F probably benign Het
Atg14 T C 14: 47,786,451 (GRCm39) I268V probably benign Het
Atg14 T A 14: 47,783,081 (GRCm39) probably benign Het
Atm A T 9: 53,408,562 (GRCm39) probably benign Het
Cers6 T C 2: 68,899,013 (GRCm39) F217S probably benign Het
Crebbp A C 16: 3,944,469 (GRCm39) probably null Het
Csmd1 T A 8: 16,049,869 (GRCm39) probably benign Het
Dmac2l A T 12: 69,787,819 (GRCm39) Y85F probably benign Het
Eml1 T A 12: 108,496,571 (GRCm39) V609E probably damaging Het
Fryl A G 5: 73,222,636 (GRCm39) S204P probably damaging Het
Gpr152 A G 19: 4,192,843 (GRCm39) D128G probably damaging Het
Itgal T A 7: 126,927,844 (GRCm39) V1013D possibly damaging Het
Kctd18 A G 1: 58,004,559 (GRCm39) Y112H probably damaging Het
Kdm4d T A 9: 14,375,850 (GRCm39) T3S probably benign Het
Lrp1b C T 2: 41,000,765 (GRCm39) probably null Het
Mex3c T A 18: 73,723,360 (GRCm39) D484E possibly damaging Het
Nalf1 T A 8: 9,257,930 (GRCm39) D406V probably benign Het
Nat14 T C 7: 4,927,050 (GRCm39) V74A possibly damaging Het
Or2b6 A G 13: 21,823,510 (GRCm39) F61S probably damaging Het
Pabpc2 C T 18: 39,908,193 (GRCm39) T486I probably benign Het
Pgm2 A G 5: 64,260,289 (GRCm39) probably benign Het
Pkn3 T A 2: 29,973,149 (GRCm39) I353N probably damaging Het
Rbm44 T A 1: 91,083,260 (GRCm39) S594R possibly damaging Het
Rrbp1 C T 2: 143,830,350 (GRCm39) A606T possibly damaging Het
Tcof1 A G 18: 60,964,850 (GRCm39) V623A possibly damaging Het
Tg A G 15: 66,577,123 (GRCm39) E1482G probably benign Het
Uba1 A G X: 20,541,885 (GRCm39) T546A probably benign Het
Vmn2r37 T C 7: 9,220,934 (GRCm39) K310E probably benign Het
Zbtb38 A T 9: 96,569,126 (GRCm39) W653R probably damaging Het
Zdhhc19 A T 16: 32,318,440 (GRCm39) I99F probably damaging Het
Zfp236 T C 18: 82,648,239 (GRCm39) Y974C probably damaging Het
Other mutations in Ccdc9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01387:Ccdc9 APN 7 16,018,424 (GRCm39) start codon destroyed probably null 0.01
IGL02167:Ccdc9 APN 7 16,018,284 (GRCm39) nonsense probably null
IGL02805:Ccdc9 APN 7 16,009,199 (GRCm39) missense probably benign 0.01
R0537:Ccdc9 UTSW 7 16,014,701 (GRCm39) unclassified probably benign
R0631:Ccdc9 UTSW 7 16,012,384 (GRCm39) missense probably damaging 1.00
R1340:Ccdc9 UTSW 7 16,009,315 (GRCm39) unclassified probably benign
R1758:Ccdc9 UTSW 7 16,010,161 (GRCm39) missense probably damaging 0.99
R2067:Ccdc9 UTSW 7 16,012,475 (GRCm39) splice site probably null
R2207:Ccdc9 UTSW 7 16,018,194 (GRCm39) critical splice donor site probably benign
R5278:Ccdc9 UTSW 7 16,012,306 (GRCm39) nonsense probably null
R5371:Ccdc9 UTSW 7 16,014,655 (GRCm39) missense probably damaging 1.00
R7341:Ccdc9 UTSW 7 16,014,552 (GRCm39) missense probably damaging 1.00
R7526:Ccdc9 UTSW 7 16,016,325 (GRCm39) missense probably damaging 0.98
R7556:Ccdc9 UTSW 7 16,018,491 (GRCm39) intron probably benign
R7683:Ccdc9 UTSW 7 16,018,287 (GRCm39) missense probably damaging 1.00
R8673:Ccdc9 UTSW 7 16,018,286 (GRCm39) missense probably damaging 1.00
R9262:Ccdc9 UTSW 7 16,012,400 (GRCm39) missense probably benign 0.01
R9322:Ccdc9 UTSW 7 16,012,360 (GRCm39) missense probably damaging 0.99
R9481:Ccdc9 UTSW 7 16,016,761 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16