Incidental Mutation 'IGL02524:Cd80'
ID 296985
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Cd80
Ensembl Gene ENSMUSG00000075122
Gene Name CD80 antigen
Synonyms B7.1, Ly-53, Cd28l, Ly53, B7-1
Accession Numbers
Essential gene? Probably non essential (E-score: 0.177) question?
Stock # IGL02524
Quality Score
Status
Chromosome 16
Chromosomal Location 38277793-38316682 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 38303045 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 164 (V164A)
Ref Sequence ENSEMBL: ENSMUSP00000156252 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000099816] [ENSMUST00000231716] [ENSMUST00000232409]
AlphaFold Q00609
Predicted Effect probably benign
Transcript: ENSMUST00000099816
AA Change: V258A

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000097404
Gene: ENSMUSG00000075122
AA Change: V258A

DomainStartEndE-ValueType
low complexity region 20 31 N/A INTRINSIC
IG 39 138 5.08e-5 SMART
Pfam:Ig_3 140 223 3.5e-5 PFAM
Pfam:C2-set_2 145 230 1.4e-20 PFAM
transmembrane domain 249 271 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000231716
AA Change: V258A

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000232409
AA Change: V164A

PolyPhen 2 Score 0.411 (Sensitivity: 0.89; Specificity: 0.90)
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a membrane receptor that is activated by the binding of CD28 or CTLA-4. The activated protein induces T-cell proliferation and cytokine production. This protein can act as a receptor for adenovirus subgroup B and may play a role in lupus neuropathy. [provided by RefSeq, Aug 2011]
PHENOTYPE: Homozygous mutation of this gene results in a 70% reduction in the mixed lymphocyte response in LPS- and dextran sulfate-stimulated B cells. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 40 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca8a A G 11: 109,969,641 (GRCm39) probably benign Het
Acvr1 T C 2: 58,338,319 (GRCm39) probably benign Het
Asap3 A T 4: 135,965,927 (GRCm39) T453S probably damaging Het
Ccdc110 C T 8: 46,394,979 (GRCm39) P290L probably benign Het
Ccdc127 A G 13: 74,501,016 (GRCm39) N11S probably damaging Het
Ctnna3 T C 10: 64,096,605 (GRCm39) I381T possibly damaging Het
Epha7 A T 4: 28,821,494 (GRCm39) T220S possibly damaging Het
Etnppl A G 3: 130,424,320 (GRCm39) probably benign Het
Far2 T A 6: 148,052,156 (GRCm39) L145Q probably damaging Het
Fdxr A G 11: 115,162,086 (GRCm39) probably null Het
Jmy A G 13: 93,609,268 (GRCm39) V347A probably damaging Het
Kcns2 A G 15: 34,838,981 (GRCm39) I115V probably benign Het
Kif2a A G 13: 107,100,863 (GRCm39) L627S possibly damaging Het
Krtap26-1 A G 16: 88,444,367 (GRCm39) S85P possibly damaging Het
Ldlr C A 9: 21,644,977 (GRCm39) D168E probably damaging Het
Lrrc8e T G 8: 4,285,392 (GRCm39) L539R probably damaging Het
Mmp8 A G 9: 7,560,506 (GRCm39) E61G probably damaging Het
Msh2 T C 17: 87,985,785 (GRCm39) F121L probably benign Het
Myh4 A G 11: 67,140,066 (GRCm39) K638E possibly damaging Het
Ndufaf6 A G 4: 11,059,091 (GRCm39) F246S probably benign Het
Nynrin C T 14: 56,108,931 (GRCm39) A1346V possibly damaging Het
Or8k53 A C 2: 86,177,686 (GRCm39) C141W probably damaging Het
P2rx1 C T 11: 72,900,474 (GRCm39) P196L probably damaging Het
Pbx3 T C 2: 34,260,830 (GRCm39) probably benign Het
Psen2 A T 1: 180,073,232 (GRCm39) S30T probably benign Het
Rack1 T C 11: 48,694,298 (GRCm39) V166A probably benign Het
Rpgrip1 A G 14: 52,358,511 (GRCm39) T206A probably benign Het
Rrp7a A G 15: 83,002,379 (GRCm39) probably benign Het
Slco1b2 C T 6: 141,616,798 (GRCm39) T377I probably benign Het
Spmip11 G A 15: 98,469,006 (GRCm39) probably null Het
Sult2a6 A T 7: 13,970,611 (GRCm39) S162T possibly damaging Het
Syt2 A G 1: 134,669,703 (GRCm39) K115E probably benign Het
Tet1 A G 10: 62,714,425 (GRCm39) S457P probably damaging Het
Trbv3 A G 6: 41,025,599 (GRCm39) E63G possibly damaging Het
Unc13d T C 11: 115,961,145 (GRCm39) Y404C probably damaging Het
Usp32 G A 11: 84,900,837 (GRCm39) R1128* probably null Het
Vps4a G A 8: 107,763,383 (GRCm39) probably benign Het
Ythdc2 T A 18: 44,980,921 (GRCm39) H505Q probably damaging Het
Ywhab T A 2: 163,858,057 (GRCm39) L208Q probably damaging Het
Zfyve16 T C 13: 92,641,022 (GRCm39) K1241E probably benign Het
Other mutations in Cd80
AlleleSourceChrCoordTypePredicted EffectPPH Score
Prod UTSW 16 38,294,391 (GRCm39) nonsense probably null
FR4304:Cd80 UTSW 16 38,306,677 (GRCm39) small insertion probably benign
FR4340:Cd80 UTSW 16 38,306,678 (GRCm39) small insertion probably benign
FR4548:Cd80 UTSW 16 38,306,681 (GRCm39) small insertion probably benign
R0605:Cd80 UTSW 16 38,303,056 (GRCm39) missense probably benign 0.07
R1213:Cd80 UTSW 16 38,294,245 (GRCm39) missense probably damaging 0.99
R1905:Cd80 UTSW 16 38,294,539 (GRCm39) missense probably damaging 1.00
R3124:Cd80 UTSW 16 38,294,255 (GRCm39) missense probably damaging 1.00
R5154:Cd80 UTSW 16 38,294,342 (GRCm39) missense probably benign 0.34
R5316:Cd80 UTSW 16 38,294,239 (GRCm39) nonsense probably null
R5730:Cd80 UTSW 16 38,303,097 (GRCm39) critical splice donor site probably null
R7022:Cd80 UTSW 16 38,306,866 (GRCm39) splice site probably null
R7447:Cd80 UTSW 16 38,294,251 (GRCm39) missense probably benign 0.10
R7806:Cd80 UTSW 16 38,294,315 (GRCm39) missense probably benign 0.02
R7971:Cd80 UTSW 16 38,294,391 (GRCm39) nonsense probably null
Posted On 2015-04-16