Incidental Mutation 'IGL02561:Aifm2'
ID298670
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Aifm2
Ensembl Gene ENSMUSG00000020085
Gene Nameapoptosis-inducing factor, mitochondrion-associated 2
Synonyms5430437E11Rik, D730001I10Rik, Amid, PRG3
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.106) question?
Stock #IGL02561
Quality Score
Status
Chromosome10
Chromosomal Location61715263-61739260 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 61726007 bp
ZygosityHeterozygous
Amino Acid Change Aspartic acid to Glycine at position 44 (D44G)
Ref Sequence ENSEMBL: ENSMUSP00000101095 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000067857] [ENSMUST00000080099] [ENSMUST00000099706] [ENSMUST00000105455]
Predicted Effect probably damaging
Transcript: ENSMUST00000067857
AA Change: D44G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000070054
Gene: ENSMUSG00000020085
AA Change: D44G

DomainStartEndE-ValueType
Pfam:Pyr_redox_2 13 291 3.2e-20 PFAM
Pfam:K_oxygenase 89 193 1.4e-7 PFAM
Pfam:Pyr_redox 145 233 4e-10 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000080099
AA Change: D44G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000078998
Gene: ENSMUSG00000020085
AA Change: D44G

DomainStartEndE-ValueType
Pfam:Pyr_redox_2 12 302 5.4e-43 PFAM
Pfam:K_oxygenase 94 190 5.2e-7 PFAM
Pfam:Pyr_redox 144 230 7.2e-10 PFAM
low complexity region 328 342 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000099706
AA Change: D44G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000097297
Gene: ENSMUSG00000020085
AA Change: D44G

DomainStartEndE-ValueType
Pfam:Pyr_redox_2 13 291 3.2e-20 PFAM
Pfam:K_oxygenase 89 193 1.4e-7 PFAM
Pfam:Pyr_redox 145 233 4e-10 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000105455
AA Change: D44G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000101095
Gene: ENSMUSG00000020085
AA Change: D44G

DomainStartEndE-ValueType
Pfam:Pyr_redox_2 13 291 3.2e-20 PFAM
Pfam:K_oxygenase 89 193 1.4e-7 PFAM
Pfam:Pyr_redox 145 233 4e-10 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131361
Predicted Effect noncoding transcript
Transcript: ENSMUST00000140664
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a flavoprotein oxidoreductase that binds single stranded DNA and is thought to contribute to apoptosis in the presence of bacterial and viral DNA. The expression of this gene is also found to be induced by tumor suppressor protein p53 in colon cancer cells. [provided by RefSeq, Nov 2010]
PHENOTYPE: Homozygous null mice display reduced sensitivity to genotoxin induced cellular growth inhibition but have no change in spontaneous or induced tumor incidence. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 37 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcg3 T A 5: 104,977,670 Q49L probably benign Het
Cdc45 C T 16: 18,798,729 M200I probably benign Het
Cmya5 T C 13: 93,091,858 T2241A probably benign Het
Cntn4 C T 6: 106,523,509 P316S probably damaging Het
Ctnna2 G T 6: 77,845,580 S13R probably benign Het
Cyb5a G A 18: 84,871,512 G46D probably damaging Het
Daam1 T C 12: 71,946,516 V353A unknown Het
Ddx6 C T 9: 44,634,168 T417I probably damaging Het
Fcgbp C T 7: 28,101,174 probably benign Het
Gdi2 T C 13: 3,548,954 I46T possibly damaging Het
Gm3629 T C 14: 6,590,618 probably benign Het
Grap2 A T 15: 80,647,848 probably benign Het
Gsto2 T C 19: 47,886,190 probably benign Het
Gtf2a1 A T 12: 91,575,753 D57E possibly damaging Het
Hif1a A G 12: 73,942,206 I622M possibly damaging Het
Hmcn1 T C 1: 150,809,726 T328A probably benign Het
Ighv1-54 T C 12: 115,193,769 K86R probably benign Het
Igkv4-55 C T 6: 69,607,376 S84N probably damaging Het
Ilvbl T C 10: 78,577,144 S167P probably benign Het
Kcnn2 A G 18: 45,592,192 I252V possibly damaging Het
Lss T C 10: 76,540,430 probably benign Het
Mlip C A 9: 77,181,351 probably null Het
Ncbp1 C T 4: 46,159,711 T408M possibly damaging Het
Notch4 A G 17: 34,568,160 probably benign Het
Npepps A T 11: 97,229,849 C528* probably null Het
Nxf2 T C X: 134,956,452 T163A probably benign Het
Olfr1224-ps1 T C 2: 89,157,141 I11M possibly damaging Het
Phka1 A T X: 102,598,289 probably benign Het
Ptpn13 T G 5: 103,562,291 L1564R probably damaging Het
Robo3 A G 9: 37,427,091 S343P possibly damaging Het
Smarca2 A G 19: 26,716,182 D1262G possibly damaging Het
Spns1 C T 7: 126,373,769 probably null Het
Srrm1 G A 4: 135,325,104 P658L unknown Het
Ttpal A G 2: 163,607,449 T75A probably damaging Het
Usp34 A G 11: 23,351,652 T359A probably benign Het
Zfp518a G A 19: 40,914,617 G997R probably damaging Het
Zic2 A T 14: 122,478,545 K360* probably null Het
Other mutations in Aifm2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02297:Aifm2 APN 10 61735548 missense possibly damaging 0.62
IGL02708:Aifm2 APN 10 61738575 utr 3 prime probably benign
R0690:Aifm2 UTSW 10 61726452 missense probably benign 0.01
R2119:Aifm2 UTSW 10 61735604 missense possibly damaging 0.60
R2404:Aifm2 UTSW 10 61728195 missense probably benign 0.08
R4698:Aifm2 UTSW 10 61727756 missense probably benign 0.00
R4826:Aifm2 UTSW 10 61725989 missense probably benign
R5228:Aifm2 UTSW 10 61732417 missense probably damaging 0.99
R5668:Aifm2 UTSW 10 61725917 missense probably damaging 1.00
R7378:Aifm2 UTSW 10 61727717 missense possibly damaging 0.79
X0025:Aifm2 UTSW 10 61735485 missense probably damaging 1.00
Posted On2015-04-16