Incidental Mutation 'IGL02586:Vmn1r88'
ID 299536
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r88
Ensembl Gene ENSMUSG00000095902
Gene Name vomeronasal 1 receptor, 88
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.054) question?
Stock # IGL02586
Quality Score
Status
Chromosome 7
Chromosomal Location 12911646-12912596 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 12911735 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Stop codon at position 30 (Y30*)
Ref Sequence ENSEMBL: ENSMUSP00000128946 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000171783]
AlphaFold no structure available at present
Predicted Effect noncoding transcript
Transcript: ENSMUST00000122190
Predicted Effect probably null
Transcript: ENSMUST00000171783
AA Change: Y30*
SMART Domains Protein: ENSMUSP00000128946
Gene: ENSMUSG00000095902
AA Change: Y30*

DomainStartEndE-ValueType
Pfam:TAS2R 1 306 2e-14 PFAM
Pfam:V1R 35 301 1.4e-30 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca13 A G 11: 9,243,983 (GRCm39) I1949V possibly damaging Het
Anapc2 T A 2: 25,175,108 (GRCm39) M742K probably benign Het
Arhgef12 T A 9: 42,917,200 (GRCm39) K380* probably null Het
Armc1 G T 3: 19,188,192 (GRCm39) probably benign Het
Bltp1 G A 3: 37,098,757 (GRCm39) W4626* probably null Het
Diaph3 A T 14: 87,223,512 (GRCm39) L323* probably null Het
Fbxo11 C T 17: 88,318,711 (GRCm39) probably benign Het
Flywch1 C T 17: 23,974,676 (GRCm39) A655T probably benign Het
Frmpd1 A G 4: 45,285,160 (GRCm39) D1327G probably damaging Het
Ggact G A 14: 123,128,942 (GRCm39) T91I possibly damaging Het
Gm10250 T A 15: 5,150,412 (GRCm39) probably benign Het
Gsdmc4 T C 15: 63,765,641 (GRCm39) S303G probably damaging Het
Helt T C 8: 46,746,276 (GRCm39) E15G probably damaging Het
Kcnf1 T A 12: 17,226,144 (GRCm39) S26C probably benign Het
Lilra6 T C 7: 3,911,819 (GRCm39) T280A probably benign Het
Lipo3 A T 19: 33,559,539 (GRCm39) D110E possibly damaging Het
Mepe C A 5: 104,485,316 (GRCm39) T152N probably benign Het
Nr2f1 C A 13: 78,343,275 (GRCm39) probably benign Het
Or5ak24 T C 2: 85,260,810 (GRCm39) D121G possibly damaging Het
Or6c214 A G 10: 129,590,524 (GRCm39) I265T possibly damaging Het
Peg3 T C 7: 6,713,068 (GRCm39) D718G probably benign Het
Phf2 A T 13: 48,967,334 (GRCm39) probably benign Het
Pigc A T 1: 161,798,503 (GRCm39) I162F probably benign Het
Raf1 A G 6: 115,597,267 (GRCm39) L11P probably damaging Het
Rlf T C 4: 121,007,261 (GRCm39) Y573C probably damaging Het
Rnf123 G A 9: 107,945,501 (GRCm39) R390* probably null Het
Rnf149 T G 1: 39,604,296 (GRCm39) Q189P probably benign Het
Slc11a1 T C 1: 74,424,291 (GRCm39) probably benign Het
Slc22a12 C T 19: 6,590,487 (GRCm39) M234I probably benign Het
Slc28a1 A T 7: 80,814,167 (GRCm39) I455F probably benign Het
Slc35f5 T G 1: 125,512,273 (GRCm39) L358V probably damaging Het
Slc47a1 A T 11: 61,235,147 (GRCm39) V562D probably benign Het
Srrm1 G A 4: 135,052,415 (GRCm39) P658L unknown Het
Ushbp1 T C 8: 71,841,394 (GRCm39) probably benign Het
Vmn2r27 A T 6: 124,201,434 (GRCm39) Y174* probably null Het
Wwox T C 8: 115,438,947 (GRCm39) Y338H possibly damaging Het
Zfp518a G A 19: 40,903,061 (GRCm39) G997R probably damaging Het
Zup1 A T 10: 33,811,261 (GRCm39) probably benign Het
Other mutations in Vmn1r88
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01828:Vmn1r88 APN 7 12,911,662 (GRCm39) missense probably damaging 1.00
IGL01879:Vmn1r88 APN 7 12,912,229 (GRCm39) missense probably benign 0.12
IGL02028:Vmn1r88 APN 7 12,911,719 (GRCm39) missense probably benign
IGL03176:Vmn1r88 APN 7 12,911,779 (GRCm39) missense probably damaging 1.00
PIT4466001:Vmn1r88 UTSW 7 12,912,403 (GRCm39) missense possibly damaging 0.83
R1163:Vmn1r88 UTSW 7 12,912,060 (GRCm39) missense probably benign
R1478:Vmn1r88 UTSW 7 12,911,878 (GRCm39) missense probably damaging 1.00
R2376:Vmn1r88 UTSW 7 12,911,785 (GRCm39) missense probably damaging 0.99
R3624:Vmn1r88 UTSW 7 12,911,790 (GRCm39) missense probably benign 0.08
R4543:Vmn1r88 UTSW 7 12,911,907 (GRCm39) missense possibly damaging 0.52
R4593:Vmn1r88 UTSW 7 12,911,769 (GRCm39) missense probably damaging 0.96
R4721:Vmn1r88 UTSW 7 12,912,451 (GRCm39) nonsense probably null
R5927:Vmn1r88 UTSW 7 12,912,440 (GRCm39) missense probably benign 0.12
R6411:Vmn1r88 UTSW 7 12,911,970 (GRCm39) missense probably damaging 1.00
R6535:Vmn1r88 UTSW 7 12,912,112 (GRCm39) missense probably benign 0.03
R6598:Vmn1r88 UTSW 7 12,912,150 (GRCm39) missense probably damaging 1.00
R6857:Vmn1r88 UTSW 7 12,912,258 (GRCm39) missense possibly damaging 0.87
R9389:Vmn1r88 UTSW 7 12,912,546 (GRCm39) missense probably damaging 1.00
R9769:Vmn1r88 UTSW 7 12,912,280 (GRCm39) missense probably damaging 0.97
Posted On 2015-04-16