Incidental Mutation 'IGL02596:Zxdc'
ID |
299881 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Zxdc
|
Ensembl Gene |
ENSMUSG00000034430 |
Gene Name |
ZXD family zinc finger C |
Synonyms |
B930086F11Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.117)
|
Stock # |
IGL02596
|
Quality Score |
|
Status
|
|
Chromosome |
6 |
Chromosomal Location |
90346474-90380472 bp(+) (GRCm39) |
Type of Mutation |
critical splice acceptor site |
DNA Base Change (assembly) |
A to G
at 90350691 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000109167
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000045740]
[ENSMUST00000075117]
[ENSMUST00000113539]
|
AlphaFold |
Q8C8V1 |
Predicted Effect |
probably null
Transcript: ENSMUST00000045740
|
SMART Domains |
Protein: ENSMUSP00000036329 Gene: ENSMUSG00000034430
Domain | Start | End | E-Value | Type |
low complexity region
|
22 |
73 |
N/A |
INTRINSIC |
low complexity region
|
105 |
115 |
N/A |
INTRINSIC |
low complexity region
|
134 |
152 |
N/A |
INTRINSIC |
ZnF_C2H2
|
176 |
200 |
4.79e-3 |
SMART |
ZnF_C2H2
|
209 |
233 |
4.3e-5 |
SMART |
ZnF_C2H2
|
239 |
263 |
4.3e-5 |
SMART |
ZnF_C2H2
|
269 |
291 |
1.69e-3 |
SMART |
ZnF_C2H2
|
298 |
322 |
1.82e-3 |
SMART |
ZnF_C2H2
|
329 |
353 |
1.26e-2 |
SMART |
ZnF_C2H2
|
359 |
383 |
1.36e-2 |
SMART |
ZnF_C2H2
|
389 |
413 |
5.21e-4 |
SMART |
ZnF_C2H2
|
419 |
443 |
4.72e-2 |
SMART |
ZnF_C2H2
|
452 |
477 |
3.07e-1 |
SMART |
low complexity region
|
487 |
502 |
N/A |
INTRINSIC |
low complexity region
|
635 |
651 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000075117
|
SMART Domains |
Protein: ENSMUSP00000074619 Gene: ENSMUSG00000034430
Domain | Start | End | E-Value | Type |
low complexity region
|
22 |
73 |
N/A |
INTRINSIC |
low complexity region
|
105 |
115 |
N/A |
INTRINSIC |
low complexity region
|
134 |
152 |
N/A |
INTRINSIC |
ZnF_C2H2
|
176 |
200 |
4.79e-3 |
SMART |
ZnF_C2H2
|
209 |
233 |
4.3e-5 |
SMART |
ZnF_C2H2
|
239 |
263 |
4.3e-5 |
SMART |
ZnF_C2H2
|
269 |
291 |
1.69e-3 |
SMART |
ZnF_C2H2
|
298 |
322 |
1.82e-3 |
SMART |
ZnF_C2H2
|
329 |
353 |
1.26e-2 |
SMART |
ZnF_C2H2
|
359 |
383 |
1.36e-2 |
SMART |
ZnF_C2H2
|
389 |
413 |
5.21e-4 |
SMART |
ZnF_C2H2
|
419 |
443 |
4.72e-2 |
SMART |
ZnF_C2H2
|
452 |
477 |
3.07e-1 |
SMART |
low complexity region
|
487 |
502 |
N/A |
INTRINSIC |
low complexity region
|
635 |
651 |
N/A |
INTRINSIC |
low complexity region
|
799 |
811 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000113539
|
SMART Domains |
Protein: ENSMUSP00000109167 Gene: ENSMUSG00000034430
Domain | Start | End | E-Value | Type |
low complexity region
|
44 |
95 |
N/A |
INTRINSIC |
low complexity region
|
127 |
137 |
N/A |
INTRINSIC |
low complexity region
|
156 |
174 |
N/A |
INTRINSIC |
ZnF_C2H2
|
198 |
222 |
4.79e-3 |
SMART |
ZnF_C2H2
|
231 |
255 |
4.3e-5 |
SMART |
ZnF_C2H2
|
261 |
285 |
4.3e-5 |
SMART |
ZnF_C2H2
|
291 |
313 |
1.69e-3 |
SMART |
ZnF_C2H2
|
320 |
344 |
1.82e-3 |
SMART |
ZnF_C2H2
|
351 |
375 |
1.26e-2 |
SMART |
ZnF_C2H2
|
381 |
405 |
1.36e-2 |
SMART |
ZnF_C2H2
|
411 |
435 |
5.21e-4 |
SMART |
ZnF_C2H2
|
441 |
465 |
4.72e-2 |
SMART |
ZnF_C2H2
|
474 |
499 |
3.07e-1 |
SMART |
low complexity region
|
509 |
524 |
N/A |
INTRINSIC |
low complexity region
|
657 |
673 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000137483
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000203493
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 40 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2310002L09Rik |
T |
G |
4: 73,868,904 (GRCm39) |
Q11H |
possibly damaging |
Het |
Armcx5 |
T |
A |
X: 134,647,268 (GRCm39) |
I448K |
probably damaging |
Het |
Atp4b |
T |
A |
8: 13,443,471 (GRCm39) |
Y69F |
possibly damaging |
Het |
Ccdc7b |
T |
A |
8: 129,798,959 (GRCm39) |
V12E |
probably benign |
Het |
Cdc5l |
C |
A |
17: 45,735,530 (GRCm39) |
|
probably benign |
Het |
Clptm1l |
C |
T |
13: 73,761,785 (GRCm39) |
R330C |
probably benign |
Het |
Cpq |
C |
T |
15: 33,213,160 (GRCm39) |
R60W |
probably damaging |
Het |
Cpvl |
T |
C |
6: 53,908,995 (GRCm39) |
Y256C |
probably damaging |
Het |
Cryzl2 |
A |
T |
1: 157,292,539 (GRCm39) |
D107V |
probably damaging |
Het |
Cyp2e1 |
G |
A |
7: 140,350,031 (GRCm39) |
V239M |
probably damaging |
Het |
Cyp2j7 |
T |
A |
4: 96,103,659 (GRCm39) |
D292V |
possibly damaging |
Het |
Dcaf1 |
A |
G |
9: 106,740,220 (GRCm39) |
Y1202C |
probably damaging |
Het |
Dnah3 |
T |
C |
7: 119,538,137 (GRCm39) |
N3616S |
probably benign |
Het |
Enam |
A |
G |
5: 88,650,885 (GRCm39) |
D723G |
probably benign |
Het |
Eps8l1 |
G |
A |
7: 4,473,871 (GRCm39) |
R226H |
probably damaging |
Het |
Erich2 |
A |
G |
2: 70,343,147 (GRCm39) |
|
probably benign |
Het |
Esyt3 |
A |
C |
9: 99,210,068 (GRCm39) |
L271V |
probably benign |
Het |
Fer1l4 |
T |
C |
2: 155,881,052 (GRCm39) |
N838S |
probably benign |
Het |
Gad1 |
T |
C |
2: 70,425,028 (GRCm39) |
Y441H |
probably damaging |
Het |
Gja1 |
G |
T |
10: 56,264,348 (GRCm39) |
V236F |
possibly damaging |
Het |
Gpr156 |
T |
C |
16: 37,799,086 (GRCm39) |
I100T |
probably benign |
Het |
Hace1 |
A |
G |
10: 45,576,736 (GRCm39) |
T803A |
possibly damaging |
Het |
Jagn1 |
G |
A |
6: 113,424,562 (GRCm39) |
V145I |
probably benign |
Het |
Kdm4b |
C |
A |
17: 56,706,706 (GRCm39) |
T899K |
probably benign |
Het |
Klk1b8 |
G |
A |
7: 43,602,187 (GRCm39) |
V40M |
probably damaging |
Het |
Lyst |
G |
A |
13: 13,835,541 (GRCm39) |
C1741Y |
probably benign |
Het |
Mast1 |
G |
T |
8: 85,644,400 (GRCm39) |
A843E |
probably benign |
Het |
Mbd1 |
T |
A |
18: 74,409,868 (GRCm39) |
|
probably benign |
Het |
Mdga1 |
A |
G |
17: 30,051,379 (GRCm39) |
|
probably benign |
Het |
Mlh3 |
A |
G |
12: 85,287,732 (GRCm39) |
|
probably null |
Het |
Or10ag53 |
C |
A |
2: 87,082,473 (GRCm39) |
T64K |
probably damaging |
Het |
Or5b109 |
A |
T |
19: 13,211,763 (GRCm39) |
I50F |
probably damaging |
Het |
Pwp1 |
A |
G |
10: 85,707,882 (GRCm39) |
|
probably null |
Het |
Rbm12 |
C |
T |
2: 155,937,480 (GRCm39) |
|
probably benign |
Het |
Slc12a7 |
T |
A |
13: 73,933,242 (GRCm39) |
V100E |
probably benign |
Het |
Spata31e2 |
T |
A |
1: 26,723,083 (GRCm39) |
H699L |
probably benign |
Het |
Srrm1 |
G |
A |
4: 135,052,415 (GRCm39) |
P658L |
unknown |
Het |
Tgfb1i1 |
T |
A |
7: 127,848,068 (GRCm39) |
M1K |
probably null |
Het |
Tubgcp6 |
T |
A |
15: 88,985,117 (GRCm39) |
E1657V |
probably damaging |
Het |
Zfp770 |
A |
G |
2: 114,026,308 (GRCm39) |
V587A |
probably benign |
Het |
|
Other mutations in Zxdc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01468:Zxdc
|
APN |
6 |
90,350,761 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01943:Zxdc
|
APN |
6 |
90,349,520 (GRCm39) |
intron |
probably benign |
|
IGL02406:Zxdc
|
APN |
6 |
90,375,818 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02623:Zxdc
|
APN |
6 |
90,359,352 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02927:Zxdc
|
APN |
6 |
90,349,544 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03230:Zxdc
|
APN |
6 |
90,350,785 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4378001:Zxdc
|
UTSW |
6 |
90,350,698 (GRCm39) |
missense |
probably damaging |
1.00 |
R0071:Zxdc
|
UTSW |
6 |
90,347,398 (GRCm39) |
missense |
probably damaging |
1.00 |
R0194:Zxdc
|
UTSW |
6 |
90,349,519 (GRCm39) |
intron |
probably benign |
|
R1065:Zxdc
|
UTSW |
6 |
90,355,885 (GRCm39) |
missense |
probably damaging |
1.00 |
R1377:Zxdc
|
UTSW |
6 |
90,355,885 (GRCm39) |
missense |
probably damaging |
1.00 |
R1405:Zxdc
|
UTSW |
6 |
90,361,225 (GRCm39) |
missense |
possibly damaging |
0.50 |
R1405:Zxdc
|
UTSW |
6 |
90,361,225 (GRCm39) |
missense |
possibly damaging |
0.50 |
R1692:Zxdc
|
UTSW |
6 |
90,355,933 (GRCm39) |
nonsense |
probably null |
|
R2171:Zxdc
|
UTSW |
6 |
90,359,461 (GRCm39) |
missense |
possibly damaging |
0.53 |
R3952:Zxdc
|
UTSW |
6 |
90,347,449 (GRCm39) |
splice site |
probably null |
|
R4400:Zxdc
|
UTSW |
6 |
90,346,792 (GRCm39) |
missense |
probably damaging |
1.00 |
R4660:Zxdc
|
UTSW |
6 |
90,355,820 (GRCm39) |
missense |
probably damaging |
0.99 |
R4776:Zxdc
|
UTSW |
6 |
90,347,500 (GRCm39) |
missense |
probably damaging |
1.00 |
R4781:Zxdc
|
UTSW |
6 |
90,349,535 (GRCm39) |
missense |
probably damaging |
0.98 |
R4843:Zxdc
|
UTSW |
6 |
90,359,254 (GRCm39) |
missense |
probably damaging |
1.00 |
R5028:Zxdc
|
UTSW |
6 |
90,359,320 (GRCm39) |
missense |
probably benign |
0.44 |
R5260:Zxdc
|
UTSW |
6 |
90,359,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R5279:Zxdc
|
UTSW |
6 |
90,347,419 (GRCm39) |
missense |
possibly damaging |
0.86 |
R5324:Zxdc
|
UTSW |
6 |
90,350,782 (GRCm39) |
missense |
probably damaging |
1.00 |
R5363:Zxdc
|
UTSW |
6 |
90,359,128 (GRCm39) |
missense |
probably damaging |
0.97 |
R5436:Zxdc
|
UTSW |
6 |
90,347,542 (GRCm39) |
missense |
probably damaging |
0.99 |
R5872:Zxdc
|
UTSW |
6 |
90,347,281 (GRCm39) |
missense |
probably damaging |
0.99 |
R5940:Zxdc
|
UTSW |
6 |
90,347,307 (GRCm39) |
missense |
probably damaging |
1.00 |
R6762:Zxdc
|
UTSW |
6 |
90,359,165 (GRCm39) |
missense |
probably benign |
|
R7175:Zxdc
|
UTSW |
6 |
90,346,645 (GRCm39) |
missense |
possibly damaging |
0.85 |
R7197:Zxdc
|
UTSW |
6 |
90,355,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R7238:Zxdc
|
UTSW |
6 |
90,346,642 (GRCm39) |
missense |
unknown |
|
R7247:Zxdc
|
UTSW |
6 |
90,361,155 (GRCm39) |
missense |
unknown |
|
R7917:Zxdc
|
UTSW |
6 |
90,358,991 (GRCm39) |
missense |
probably damaging |
1.00 |
R7976:Zxdc
|
UTSW |
6 |
90,375,749 (GRCm39) |
missense |
probably benign |
0.05 |
R8792:Zxdc
|
UTSW |
6 |
90,346,986 (GRCm39) |
missense |
probably benign |
0.00 |
R8917:Zxdc
|
UTSW |
6 |
90,359,305 (GRCm39) |
missense |
probably benign |
0.00 |
R9016:Zxdc
|
UTSW |
6 |
90,359,254 (GRCm39) |
missense |
probably damaging |
1.00 |
R9076:Zxdc
|
UTSW |
6 |
90,349,821 (GRCm39) |
missense |
probably damaging |
1.00 |
R9190:Zxdc
|
UTSW |
6 |
90,375,773 (GRCm39) |
missense |
probably damaging |
0.96 |
R9216:Zxdc
|
UTSW |
6 |
90,359,189 (GRCm39) |
missense |
probably benign |
0.37 |
|
Posted On |
2015-04-16 |