Incidental Mutation 'IGL02612:Svop'
ID 300509
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Svop
Ensembl Gene ENSMUSG00000042078
Gene Name SV2 related protein
Synonyms msvop, 1110030H18Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL02612
Quality Score
Status
Chromosome 5
Chromosomal Location 114164974-114229441 bp(-) (GRCm39)
Type of Mutation makesense
DNA Base Change (assembly) A to G at 114166321 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Stop codon to Glutamine at position 549 (*549Q)
Ref Sequence ENSEMBL: ENSMUSP00000050730 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000058472] [ENSMUST00000086599] [ENSMUST00000112292] [ENSMUST00000161610]
AlphaFold Q8BFT9
Predicted Effect probably null
Transcript: ENSMUST00000058472
AA Change: *549Q
SMART Domains Protein: ENSMUSP00000050730
Gene: ENSMUSG00000042078
AA Change: *549Q

DomainStartEndE-ValueType
Pfam:Sugar_tr 66 347 2.2e-26 PFAM
Pfam:MFS_1 86 346 2e-23 PFAM
Pfam:MFS_1 376 541 2.5e-16 PFAM
Pfam:Sugar_tr 377 523 2.9e-14 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000086599
SMART Domains Protein: ENSMUSP00000083792
Gene: ENSMUSG00000042096

DomainStartEndE-ValueType
Pfam:DAO 2 245 1.8e-21 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000112292
SMART Domains Protein: ENSMUSP00000107911
Gene: ENSMUSG00000042096

DomainStartEndE-ValueType
Pfam:DAO 2 327 1.8e-39 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134790
Predicted Effect probably benign
Transcript: ENSMUST00000161610
SMART Domains Protein: ENSMUSP00000125588
Gene: ENSMUSG00000042096

DomainStartEndE-ValueType
Pfam:DAO 2 327 4.5e-33 PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele are viable with no phenotypic abnormalities. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2m A T 6: 121,654,971 (GRCm39) M1432L probably benign Het
Alg11 A G 8: 22,551,999 (GRCm39) R48G probably benign Het
Armc8 T C 9: 99,409,122 (GRCm39) probably benign Het
Bmp4 T A 14: 46,621,938 (GRCm39) D202V probably damaging Het
Car12 T G 9: 66,669,706 (GRCm39) L300R probably damaging Het
Cdc37l1 T A 19: 28,993,502 (GRCm39) *336R probably null Het
Cep89 A G 7: 35,124,080 (GRCm39) probably null Het
Ces3b T A 8: 105,811,901 (GRCm39) D103E possibly damaging Het
Chd5 A G 4: 152,445,033 (GRCm39) D338G probably damaging Het
Crot A G 5: 9,019,945 (GRCm39) C466R probably damaging Het
Dach2 T C X: 112,660,101 (GRCm39) M194T probably benign Het
Dmrtc1b A G X: 101,756,873 (GRCm39) D100G probably benign Het
Epm2a G A 10: 11,332,980 (GRCm39) R271H probably damaging Het
Fem1c G T 18: 46,638,781 (GRCm39) T407K probably benign Het
Fer1l4 T C 2: 155,889,848 (GRCm39) Y273C probably damaging Het
Foxc2 C A 8: 121,844,576 (GRCm39) A408E probably benign Het
Gbp10 A T 5: 105,366,368 (GRCm39) M512K possibly damaging Het
Gm5134 T C 10: 75,828,323 (GRCm39) L301P probably damaging Het
Grk3 A T 5: 113,117,100 (GRCm39) D100E probably benign Het
Gsdma3 T A 11: 98,526,707 (GRCm39) D322E probably damaging Het
Gucy1a2 C A 9: 3,894,556 (GRCm39) L680I possibly damaging Het
Ighv7-2 T C 12: 113,875,766 (GRCm39) Y79C probably damaging Het
Igkv4-50 T C 6: 69,678,024 (GRCm39) T27A probably benign Het
Ints2 T C 11: 86,106,404 (GRCm39) D1002G probably damaging Het
Map4k5 T A 12: 69,896,358 (GRCm39) I169F possibly damaging Het
Mink1 T C 11: 70,488,052 (GRCm39) V39A probably damaging Het
Mms22l T A 4: 24,508,482 (GRCm39) H301Q probably benign Het
Myh4 C T 11: 67,147,305 (GRCm39) T1650I probably benign Het
Or52n4 A T 7: 104,293,870 (GRCm39) D234E probably benign Het
Or8b37 T A 9: 37,958,662 (GRCm39) L48Q probably damaging Het
Or8b44 T C 9: 38,410,769 (GRCm39) M268T probably benign Het
Pate10 T C 9: 35,653,460 (GRCm39) I88T possibly damaging Het
Pbxip1 C T 3: 89,350,988 (GRCm39) T117M probably damaging Het
Pgghg C T 7: 140,526,251 (GRCm39) T572M probably damaging Het
Phactr2 G A 10: 13,121,167 (GRCm39) T511I probably damaging Het
Pip5k1a T C 3: 94,974,724 (GRCm39) I385V probably benign Het
Pwp2 A G 10: 78,018,828 (GRCm39) C60R probably damaging Het
Rgs11 G A 17: 26,426,605 (GRCm39) V279I probably benign Het
Rttn G T 18: 88,991,750 (GRCm39) D110Y probably damaging Het
Setbp1 G T 18: 78,798,925 (GRCm39) H1418Q probably damaging Het
Sf3b3 T C 8: 111,569,608 (GRCm39) I37V probably benign Het
Slc27a6 A T 18: 58,689,977 (GRCm39) I148F probably benign Het
Slmap A G 14: 26,180,621 (GRCm39) probably benign Het
Speer4a3 A C 5: 26,156,614 (GRCm39) Y122D probably benign Het
Stil A G 4: 114,880,893 (GRCm39) Q479R possibly damaging Het
Tnks C T 8: 35,316,453 (GRCm39) V889I possibly damaging Het
Tnrc6c T A 11: 117,633,826 (GRCm39) V1308E possibly damaging Het
Vmn1r208 C A 13: 22,956,993 (GRCm39) C168F probably damaging Het
Vmn2r117 A T 17: 23,678,758 (GRCm39) M822K possibly damaging Het
Vwa8 A G 14: 79,420,552 (GRCm39) N1751S probably benign Het
Vwde A T 6: 13,187,148 (GRCm39) F780I probably damaging Het
Washc2 T C 6: 116,197,577 (GRCm39) I184T possibly damaging Het
Wdr26 A T 1: 181,005,361 (GRCm39) probably benign Het
Zfp608 G A 18: 55,031,273 (GRCm39) T889M probably damaging Het
Zfp955a G T 17: 33,463,039 (GRCm39) Q31K probably damaging Het
Zpbp2 T C 11: 98,446,343 (GRCm39) L145S probably benign Het
Other mutations in Svop
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02220:Svop APN 5 114,203,589 (GRCm39) missense probably benign 0.02
R0254:Svop UTSW 5 114,176,600 (GRCm39) missense probably benign
R1705:Svop UTSW 5 114,180,356 (GRCm39) missense probably damaging 1.00
R1826:Svop UTSW 5 114,198,117 (GRCm39) critical splice donor site probably null
R3084:Svop UTSW 5 114,180,299 (GRCm39) missense probably benign
R4494:Svop UTSW 5 114,183,688 (GRCm39) missense probably damaging 0.99
R4575:Svop UTSW 5 114,203,743 (GRCm39) missense probably damaging 1.00
R4576:Svop UTSW 5 114,203,743 (GRCm39) missense probably damaging 1.00
R4578:Svop UTSW 5 114,203,743 (GRCm39) missense probably damaging 1.00
R4725:Svop UTSW 5 114,203,546 (GRCm39) unclassified probably benign
R5433:Svop UTSW 5 114,198,186 (GRCm39) missense probably damaging 1.00
R5731:Svop UTSW 5 114,198,124 (GRCm39) missense probably damaging 0.99
R5783:Svop UTSW 5 114,202,996 (GRCm39) missense possibly damaging 0.73
R5889:Svop UTSW 5 114,203,692 (GRCm39) missense probably benign 0.37
R8134:Svop UTSW 5 114,180,992 (GRCm39) missense probably benign 0.01
R8433:Svop UTSW 5 114,170,822 (GRCm39) missense probably benign 0.21
R8848:Svop UTSW 5 114,183,687 (GRCm39) missense
R8851:Svop UTSW 5 114,192,557 (GRCm39) missense probably damaging 1.00
R8868:Svop UTSW 5 114,170,854 (GRCm39) missense probably damaging 0.98
R8965:Svop UTSW 5 114,173,271 (GRCm39) missense probably benign 0.01
R9109:Svop UTSW 5 114,168,231 (GRCm39) missense probably benign 0.16
R9298:Svop UTSW 5 114,168,231 (GRCm39) missense probably benign 0.16
R9715:Svop UTSW 5 114,198,169 (GRCm39) missense probably benign 0.39
R9732:Svop UTSW 5 114,201,142 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16