Incidental Mutation 'IGL02628:Gm42641'
ID 301177
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Gm42641
Ensembl Gene
Gene Name predicted gene 42641
Synonyms
Accession Numbers
Essential gene? Not available question?
Stock # IGL02628
Quality Score
Status
Chromosome 9
Chromosomal Location (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) G to A at 108887698 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Stop codon at position 98 (Q98*)
Ref Sequence ENSEMBL: ENSMUSP00000107684 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000026737] [ENSMUST00000045011] [ENSMUST00000061973] [ENSMUST00000112053] [ENSMUST00000112059] [ENSMUST00000128062] [ENSMUST00000154184] [ENSMUST00000160217] [ENSMUST00000197099] [ENSMUST00000197689] [ENSMUST00000196954] [ENSMUST00000198295] [ENSMUST00000159614] [ENSMUST00000161521] [ENSMUST00000198376] [ENSMUST00000197483] [ENSMUST00000198708] [ENSMUST00000200515] [ENSMUST00000200629]
AlphaFold no structure available at present
PDB Structure The crystal structure of TREX1 explains the 3' nucleotide specificity and reveals a polyproline II helix for protein partenring [X-RAY DIFFRACTION]
Structure of TREX1 in complex with a nucleotide [X-RAY DIFFRACTION]
Structure of TREX1 in complex with DNA [X-RAY DIFFRACTION]
Crystal Structure of mTREX1 with ssDNA [X-RAY DIFFRACTION]
Structure of TREX1 in complex with a nucleotide and an inhibitor ion (lithium) [X-RAY DIFFRACTION]
Structure of TREX1 in complex with a nucleotide and inhibitor ions (sodium and zinc) [X-RAY DIFFRACTION]
TREX1 3' Exonuclease D18N Familial Chilblain Lupus Mutant [X-RAY DIFFRACTION]
Crystal Structure of the mTREX1 Apoprotein [X-RAY DIFFRACTION]
TREX1 3' Exonuclease V201D Aicardi-Goutieres Syndrome Mutant [X-RAY DIFFRACTION]
Mouse TREX1 D200H mutant [X-RAY DIFFRACTION]
>> 1 additional structures at PDB <<
Predicted Effect probably benign
Transcript: ENSMUST00000026737
SMART Domains Protein: ENSMUSP00000026737
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
low complexity region 11 22 N/A INTRINSIC
Pfam:Shisa 24 211 1.3e-59 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000045011
SMART Domains Protein: ENSMUSP00000044831
Gene: ENSMUSG00000025646

DomainStartEndE-ValueType
SCOP:d1eq1a_ 96 193 8e-3 SMART
low complexity region 326 338 N/A INTRINSIC
low complexity region 542 548 N/A INTRINSIC
low complexity region 555 566 N/A INTRINSIC
low complexity region 598 609 N/A INTRINSIC
low complexity region 761 779 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000061973
AA Change: Q98*
SMART Domains Protein: ENSMUSP00000050971
Gene: ENSMUSG00000049734
AA Change: Q98*

DomainStartEndE-ValueType
EXOIII 13 217 2.45e-13 SMART
low complexity region 248 283 N/A INTRINSIC
transmembrane domain 287 309 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000112053
AA Change: Q98*
SMART Domains Protein: ENSMUSP00000107684
Gene: ENSMUSG00000049734
AA Change: Q98*

DomainStartEndE-ValueType
EXOIII 13 217 2.45e-13 SMART
low complexity region 248 283 N/A INTRINSIC
transmembrane domain 287 309 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000112059
SMART Domains Protein: ENSMUSP00000107690
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
low complexity region 11 22 N/A INTRINSIC
Pfam:Shisa 26 198 1.1e-48 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000128062
SMART Domains Protein: ENSMUSP00000118499
Gene: ENSMUSG00000025646

DomainStartEndE-ValueType
PDB:3MXJ|A 1 150 4e-97 PDB
SCOP:d1fxxa_ 12 146 7e-12 SMART
Blast:EXOIII 13 150 1e-85 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000154184
SMART Domains Protein: ENSMUSP00000128901
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 108 1.6e-37 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161163
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198591
Predicted Effect noncoding transcript
Transcript: ENSMUST00000160928
SMART Domains Protein: ENSMUSP00000123837
Gene: ENSMUSG00000025646

DomainStartEndE-ValueType
SCOP:d1eq1a_ 19 116 9e-3 SMART
low complexity region 249 261 N/A INTRINSIC
low complexity region 465 471 N/A INTRINSIC
low complexity region 478 489 N/A INTRINSIC
low complexity region 521 532 N/A INTRINSIC
low complexity region 684 702 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198639
Predicted Effect noncoding transcript
Transcript: ENSMUST00000197194
Predicted Effect probably benign
Transcript: ENSMUST00000160217
SMART Domains Protein: ENSMUSP00000125264
Gene: ENSMUSG00000025646

DomainStartEndE-ValueType
SCOP:d1eq1a_ 96 193 3e-3 SMART
low complexity region 326 338 N/A INTRINSIC
low complexity region 533 550 N/A INTRINSIC
low complexity region 570 581 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000197099
SMART Domains Protein: ENSMUSP00000143648
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 129 9.9e-36 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000197689
SMART Domains Protein: ENSMUSP00000142874
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 63 4.3e-21 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000196954
SMART Domains Protein: ENSMUSP00000143599
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 95 1.9e-30 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000198295
SMART Domains Protein: ENSMUSP00000143721
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 70 1.3e-17 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000159614
SMART Domains Protein: ENSMUSP00000124854
Gene: ENSMUSG00000025646

DomainStartEndE-ValueType
signal peptide 1 17 N/A INTRINSIC
low complexity region 54 60 N/A INTRINSIC
low complexity region 67 78 N/A INTRINSIC
low complexity region 110 121 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000161521
SMART Domains Protein: ENSMUSP00000125615
Gene: ENSMUSG00000025646

DomainStartEndE-ValueType
coiled coil region 108 208 N/A INTRINSIC
low complexity region 326 338 N/A INTRINSIC
low complexity region 542 548 N/A INTRINSIC
low complexity region 555 566 N/A INTRINSIC
low complexity region 598 609 N/A INTRINSIC
low complexity region 734 752 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000198376
SMART Domains Protein: ENSMUSP00000143374
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 83 5e-29 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000197483
SMART Domains Protein: ENSMUSP00000143613
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 95 1.9e-30 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199288
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200366
Predicted Effect probably benign
Transcript: ENSMUST00000198708
SMART Domains Protein: ENSMUSP00000142978
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 109 7.8e-38 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000200515
SMART Domains Protein: ENSMUSP00000142835
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 11 147 4.1e-42 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000199868
Predicted Effect probably benign
Transcript: ENSMUST00000200629
SMART Domains Protein: ENSMUSP00000142404
Gene: ENSMUSG00000025647

DomainStartEndE-ValueType
Pfam:Shisa 1 72 1.9e-23 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 27 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Actr10 T A 12: 71,001,430 (GRCm39) probably null Het
Ankhd1 T C 18: 36,780,756 (GRCm39) V1936A probably benign Het
Ap3m1 C A 14: 21,095,588 (GRCm39) E81* probably null Het
Camkk1 T C 11: 72,919,995 (GRCm39) probably benign Het
Cdc45 C T 16: 18,617,479 (GRCm39) M200I probably benign Het
Cmc1 A G 9: 117,894,376 (GRCm39) Y33H probably damaging Het
Cntnap5b A T 1: 99,999,794 (GRCm39) D184V probably damaging Het
F5 A T 1: 164,021,644 (GRCm39) D1373V probably damaging Het
Fam169a T C 13: 97,247,796 (GRCm39) probably benign Het
Fem1c G A 18: 46,639,019 (GRCm39) R328W probably damaging Het
Gba2 T C 4: 43,568,919 (GRCm39) R579G probably benign Het
Hsd17b7 A G 1: 169,792,058 (GRCm39) F117L possibly damaging Het
Itsn1 A G 16: 91,696,511 (GRCm39) D38G possibly damaging Het
Map1a T C 2: 121,130,585 (GRCm39) I467T probably damaging Het
Map2k4 T A 11: 65,581,567 (GRCm39) I382F possibly damaging Het
Myh1 T G 11: 67,097,088 (GRCm39) probably benign Het
Nr1h4 C T 10: 89,309,701 (GRCm39) A339T probably damaging Het
Opn4 T A 14: 34,315,014 (GRCm39) T420S probably benign Het
Or5h22 A C 16: 58,895,155 (GRCm39) M96R probably benign Het
Or6n1 A G 1: 173,916,756 (GRCm39) Y50C probably benign Het
Rnf123 G A 9: 107,945,501 (GRCm39) R390* probably null Het
Slc17a3 T A 13: 24,026,434 (GRCm39) M1K probably null Het
T T A 17: 8,654,190 (GRCm39) I125N probably damaging Het
Tns2 T A 15: 102,020,263 (GRCm39) S710T probably benign Het
Trav3-1 T A 14: 52,818,551 (GRCm39) V75E probably benign Het
U2surp A G 9: 95,354,143 (GRCm39) Y832H possibly damaging Het
Zng1 T A 19: 24,935,269 (GRCm39) E78D probably damaging Het
Posted On 2015-04-16