Incidental Mutation 'IGL02667:Ubn1'
ID 302772
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ubn1
Ensembl Gene ENSMUSG00000039473
Gene Name ubinuclein 1
Synonyms 1110029L11Rik, 2610108L02Rik
Accession Numbers
Essential gene? Possibly essential (E-score: 0.715) question?
Stock # IGL02667
Quality Score
Status
Chromosome 16
Chromosomal Location 4867921-4904153 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 4880463 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Glycine at position 134 (E134G)
Ref Sequence ENSEMBL: ENSMUSP00000155223 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000052449] [ENSMUST00000229126] [ENSMUST00000229570] [ENSMUST00000230703]
AlphaFold Q4G0F8
Predicted Effect probably damaging
Transcript: ENSMUST00000052449
AA Change: E134G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000061843
Gene: ENSMUSG00000039473
AA Change: E134G

DomainStartEndE-ValueType
Pfam:HUN 117 168 1.4e-22 PFAM
low complexity region 181 224 N/A INTRINSIC
low complexity region 232 238 N/A INTRINSIC
low complexity region 250 267 N/A INTRINSIC
low complexity region 331 344 N/A INTRINSIC
Pfam:UBN_AB 353 573 2.4e-80 PFAM
low complexity region 792 804 N/A INTRINSIC
low complexity region 856 882 N/A INTRINSIC
low complexity region 905 934 N/A INTRINSIC
low complexity region 970 984 N/A INTRINSIC
low complexity region 996 1006 N/A INTRINSIC
low complexity region 1016 1034 N/A INTRINSIC
low complexity region 1084 1098 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000104179
Predicted Effect noncoding transcript
Transcript: ENSMUST00000229060
Predicted Effect probably damaging
Transcript: ENSMUST00000229126
AA Change: E134G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Predicted Effect probably benign
Transcript: ENSMUST00000229570
Predicted Effect probably damaging
Transcript: ENSMUST00000230703
AA Change: E134G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Cellular senescence is a hallmark of tumor suppression and tissue aging. Senescent cells contain domains of heterochromatin, called senescence-associated heterochromatin foci (SAHF), that repress proliferation-promoting genes. The protein encoded by this gene binds to proliferation-promoting genes and is required for SAHF formation, enhancing methylation of histone H3. [provided by RefSeq, Oct 2016]
Allele List at MGI
Other mutations in this stock
Total: 26 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
6530409C15Rik A G 6: 28,217,670 (GRCm39) noncoding transcript Het
Akr1e1 G A 13: 4,645,666 (GRCm39) P174L possibly damaging Het
Arf5 C A 6: 28,425,198 (GRCm39) N95K probably damaging Het
Atl3 T C 19: 7,486,781 (GRCm39) F39L possibly damaging Het
Atp2a3 C A 11: 72,866,165 (GRCm39) H262N probably benign Het
Cyp2a12 T C 7: 26,730,583 (GRCm39) S183P probably damaging Het
Dicer1 T A 12: 104,681,165 (GRCm39) R449S probably damaging Het
Dlec1 T C 9: 118,956,534 (GRCm39) I736T probably benign Het
Eny2 T A 15: 44,292,984 (GRCm39) M12K possibly damaging Het
Fbxl21 C T 13: 56,684,942 (GRCm39) R349C probably benign Het
Gstm2 A G 3: 107,893,424 (GRCm39) L13P probably damaging Het
Gucy2g G A 19: 55,194,609 (GRCm39) T936M possibly damaging Het
Mbp G T 18: 82,572,740 (GRCm39) K12N probably damaging Het
Mon1b G T 8: 114,365,455 (GRCm39) R261L possibly damaging Het
Myo18a A G 11: 77,748,678 (GRCm39) probably benign Het
Nr2f2 T C 7: 70,007,733 (GRCm39) S117G probably damaging Het
Pi4k2b T C 5: 52,907,947 (GRCm39) probably benign Het
Pi4ka A G 16: 17,113,325 (GRCm39) F1504L possibly damaging Het
Ppm1d T C 11: 85,223,111 (GRCm39) W239R probably damaging Het
Setd1b T A 5: 123,295,560 (GRCm39) S1043T unknown Het
Tgfbrap1 T C 1: 43,106,780 (GRCm39) I298V probably benign Het
Tmem190 T A 7: 4,786,157 (GRCm39) D20E probably benign Het
Tph2 A T 10: 114,915,950 (GRCm39) C408S probably benign Het
Trmt44 A C 5: 35,728,396 (GRCm39) Y295D probably damaging Het
Trpm2 C T 10: 77,771,776 (GRCm39) R621H probably damaging Het
Tut4 T C 4: 108,415,905 (GRCm39) probably benign Het
Other mutations in Ubn1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00488:Ubn1 APN 16 4,899,778 (GRCm39) missense probably benign 0.00
IGL01726:Ubn1 APN 16 4,891,334 (GRCm39) critical splice donor site probably null
IGL01744:Ubn1 APN 16 4,889,923 (GRCm39) missense probably damaging 1.00
IGL01777:Ubn1 APN 16 4,890,013 (GRCm39) missense possibly damaging 0.46
IGL02110:Ubn1 APN 16 4,899,754 (GRCm39) splice site probably benign
IGL03345:Ubn1 APN 16 4,899,828 (GRCm39) missense probably damaging 0.98
R0201:Ubn1 UTSW 16 4,882,478 (GRCm39) missense probably damaging 1.00
R0437:Ubn1 UTSW 16 4,890,048 (GRCm39) critical splice donor site probably benign
R0514:Ubn1 UTSW 16 4,890,935 (GRCm39) missense probably damaging 1.00
R0550:Ubn1 UTSW 16 4,880,484 (GRCm39) splice site probably null
R0919:Ubn1 UTSW 16 4,882,255 (GRCm39) missense probably damaging 1.00
R1183:Ubn1 UTSW 16 4,882,406 (GRCm39) missense probably damaging 1.00
R1339:Ubn1 UTSW 16 4,873,199 (GRCm39) missense probably damaging 0.99
R1440:Ubn1 UTSW 16 4,895,158 (GRCm39) missense probably damaging 1.00
R1836:Ubn1 UTSW 16 4,895,255 (GRCm39) missense probably benign
R2024:Ubn1 UTSW 16 4,882,487 (GRCm39) missense probably damaging 1.00
R2026:Ubn1 UTSW 16 4,882,514 (GRCm39) missense probably damaging 1.00
R2105:Ubn1 UTSW 16 4,895,088 (GRCm39) nonsense probably null
R2896:Ubn1 UTSW 16 4,873,083 (GRCm39) missense possibly damaging 0.60
R3418:Ubn1 UTSW 16 4,892,243 (GRCm39) splice site probably benign
R3721:Ubn1 UTSW 16 4,891,242 (GRCm39) missense possibly damaging 0.59
R4033:Ubn1 UTSW 16 4,882,475 (GRCm39) missense probably damaging 1.00
R4398:Ubn1 UTSW 16 4,882,289 (GRCm39) missense probably damaging 0.99
R4547:Ubn1 UTSW 16 4,889,956 (GRCm39) missense probably damaging 1.00
R4646:Ubn1 UTSW 16 4,895,851 (GRCm39) missense probably damaging 0.99
R4870:Ubn1 UTSW 16 4,895,177 (GRCm39) missense probably damaging 1.00
R5018:Ubn1 UTSW 16 4,881,589 (GRCm39) missense probably damaging 1.00
R5220:Ubn1 UTSW 16 4,895,818 (GRCm39) missense probably benign 0.02
R5394:Ubn1 UTSW 16 4,892,233 (GRCm39) missense possibly damaging 0.51
R6217:Ubn1 UTSW 16 4,895,096 (GRCm39) missense probably damaging 1.00
R6372:Ubn1 UTSW 16 4,899,502 (GRCm39) missense possibly damaging 0.84
R6418:Ubn1 UTSW 16 4,899,791 (GRCm39) missense probably benign
R6823:Ubn1 UTSW 16 4,882,411 (GRCm39) missense probably damaging 1.00
R7028:Ubn1 UTSW 16 4,873,188 (GRCm39) missense probably damaging 1.00
R7203:Ubn1 UTSW 16 4,895,080 (GRCm39) missense possibly damaging 0.57
R7498:Ubn1 UTSW 16 4,894,969 (GRCm39) missense probably damaging 0.99
R7596:Ubn1 UTSW 16 4,899,422 (GRCm39) missense probably benign 0.25
R8383:Ubn1 UTSW 16 4,895,222 (GRCm39) missense possibly damaging 0.95
R8514:Ubn1 UTSW 16 4,891,263 (GRCm39) missense probably damaging 1.00
R8559:Ubn1 UTSW 16 4,882,634 (GRCm39) missense possibly damaging 0.64
R8699:Ubn1 UTSW 16 4,881,567 (GRCm39) missense possibly damaging 0.79
R9350:Ubn1 UTSW 16 4,899,422 (GRCm39) missense probably benign 0.25
R9364:Ubn1 UTSW 16 4,888,492 (GRCm39) missense unknown
R9554:Ubn1 UTSW 16 4,888,492 (GRCm39) missense unknown
RF018:Ubn1 UTSW 16 4,882,256 (GRCm39) missense probably damaging 1.00
X0067:Ubn1 UTSW 16 4,873,202 (GRCm39) missense possibly damaging 0.95
Posted On 2015-04-16