Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02695:Adgrb2'

303887

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Adgrb2

Ensembl Gene

ENSMUSG00000028782

Gene Name

adhesion G protein-coupled receptor B2

Synonyms

Bai2

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02695

Quality Score

Status

Chromosome

Chromosomal Location

129878663-129916426 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 129912625 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glycine to Aspartic acid at position 1293 (G1293D)

Ref Sequence

ENSEMBL: ENSMUSP00000101638 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030571] [ENSMUST00000097868] [ENSMUST00000106015] [ENSMUST00000106017] [ENSMUST00000106018] [ENSMUST00000120204] [ENSMUST00000121049]

AlphaFold

Q8CGM1

Predicted Effect

probably benign
Transcript: ENSMUST00000030571
AA Change: G1305D

PolyPhen 2 Score 0.028 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000030571
Gene: ENSMUSG00000028782
AA Change: G1305D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	9.52e-11	SMART
TSP1	358	408	1.86e-13	SMART
TSP1	413	463	9.89e-9	SMART
TSP1	469	519	3.09e-10	SMART
HormR	521	587	3.27e-18	SMART
Pfam:GAIN	600	842	1.6e-41	PFAM
GPS	864	917	2.57e-19	SMART
Pfam:7tm_2	923	1192	1.7e-67	PFAM
low complexity region	1357	1371	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000097868
AA Change: G1272D

PolyPhen 2 Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000095480
Gene: ENSMUSG00000028782
AA Change: G1272D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	9.52e-11	SMART
TSP1	358	408	1.86e-13	SMART
TSP1	413	463	9.89e-9	SMART
TSP1	469	519	3.09e-10	SMART
HormR	521	587	3.27e-18	SMART
Pfam:DUF3497	597	859	1.2e-54	PFAM
GPS	864	917	2.57e-19	SMART
Pfam:7tm_2	923	1159	2.6e-69	PFAM
low complexity region	1324	1338	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000106015
AA Change: G1305D

PolyPhen 2 Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000101636
Gene: ENSMUSG00000028782
AA Change: G1305D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	9.52e-11	SMART
TSP1	358	408	1.86e-13	SMART
TSP1	413	463	9.89e-9	SMART
TSP1	469	519	3.09e-10	SMART
HormR	521	587	3.27e-18	SMART
Pfam:DUF3497	597	859	6.4e-55	PFAM
GPS	864	917	2.57e-19	SMART
Pfam:7tm_2	923	1192	4.1e-68	PFAM
low complexity region	1357	1371	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000106017
AA Change: G1293D

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000101638
Gene: ENSMUSG00000028782
AA Change: G1293D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	9.52e-11	SMART
TSP1	358	408	1.86e-13	SMART
TSP1	413	463	9.89e-9	SMART
TSP1	469	519	3.09e-10	SMART
HormR	521	587	3.27e-18	SMART
Pfam:DUF3497	597	859	6.3e-55	PFAM
GPS	864	917	2.57e-19	SMART
Pfam:7tm_2	923	1180	4.6e-68	PFAM
low complexity region	1345	1359	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000106018
AA Change: G1217D

PolyPhen 2 Score 0.028 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000101639
Gene: ENSMUSG00000028782
AA Change: G1217D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	1.86e-13	SMART
TSP1	358	408	9.89e-9	SMART
TSP1	414	464	3.09e-10	SMART
HormR	466	532	3.27e-18	SMART
Pfam:DUF3497	542	804	1.1e-54	PFAM
GPS	809	862	2.57e-19	SMART
Pfam:7tm_2	868	1104	2.4e-69	PFAM
low complexity region	1269	1283	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000120204
AA Change: G1217D

PolyPhen 2 Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000112524
Gene: ENSMUSG00000028782
AA Change: G1217D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	9.52e-11	SMART
TSP1	358	408	9.89e-9	SMART
TSP1	414	464	3.09e-10	SMART
HormR	466	532	3.27e-18	SMART
Pfam:DUF3497	542	804	8.2e-55	PFAM
GPS	809	862	2.57e-19	SMART
Pfam:7tm_2	868	1104	9.6e-70	PFAM
low complexity region	1269	1283	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000121049
AA Change: G1250D

PolyPhen 2 Score 0.099 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000112869
Gene: ENSMUSG00000028782
AA Change: G1250D

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
low complexity region	117	127	N/A	INTRINSIC
low complexity region	160	173	N/A	INTRINSIC
low complexity region	197	208	N/A	INTRINSIC
low complexity region	272	278	N/A	INTRINSIC
TSP1	303	353	1.86e-13	SMART
TSP1	358	408	9.89e-9	SMART
TSP1	414	464	3.09e-10	SMART
HormR	466	532	3.27e-18	SMART
Pfam:DUF3497	542	804	6.1e-55	PFAM
GPS	809	862	2.57e-19	SMART
Pfam:7tm_2	868	1137	3.8e-68	PFAM
low complexity region	1302	1316	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136787

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136416

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000163625

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a a seven-span transmembrane protein that is thought to be a member of the secretin receptor family. The encoded protein is a brain-specific inhibitor of angiogenesis. The mature peptide may be further cleaved into additional products (PMID:20367554). Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]
PHENOTYPE: Mice homozygous for disruptions in this gene show a lessening of depression like behavior. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 38 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam2	A	T	14: 66,287,929 (GRCm39)	M389K	probably benign	Het
Adamts4	C	A	1: 171,080,203 (GRCm39)	T252K	probably damaging	Het
Ankfn1	T	C	11: 89,282,645 (GRCm39)	E1013G	probably damaging	Het
Ankrd34b	C	A	13: 92,576,120 (GRCm39)	H451N	possibly damaging	Het
Cd300c2	C	T	11: 114,892,379 (GRCm39)		probably benign	Het
Cntnap3	T	G	13: 64,919,946 (GRCm39)	Q637P	probably benign	Het
Cpne6	A	T	14: 55,752,037 (GRCm39)	I265F	probably damaging	Het
Dot1l	C	A	10: 80,613,442 (GRCm39)	T18K	probably damaging	Het
Fam83c	T	C	2: 155,673,435 (GRCm39)	D251G	probably benign	Het
Fyb1	A	G	15: 6,610,402 (GRCm39)	K325R	probably damaging	Het
Gas2l2	T	A	11: 83,313,468 (GRCm39)	I615F	probably damaging	Het
Gigyf2	A	G	1: 87,344,549 (GRCm39)	N494S	probably benign	Het
Gnaz	T	C	10: 74,827,974 (GRCm39)		probably null	Het
Haus5	A	T	7: 30,362,702 (GRCm39)	L36Q	probably damaging	Het
Hecw2	C	T	1: 53,965,368 (GRCm39)	G486D	possibly damaging	Het
Hmcn2	T	C	2: 31,298,985 (GRCm39)	F2777S	possibly damaging	Het
Il1rl1	T	C	1: 40,485,718 (GRCm39)	S290P	possibly damaging	Het
Itgam	G	T	7: 127,685,113 (GRCm39)	A409S	possibly damaging	Het
Kdm5b	T	A	1: 134,532,223 (GRCm39)	M467K	possibly damaging	Het
Lama2	A	C	10: 26,876,771 (GRCm39)	V2725G	probably benign	Het
Lhpp	G	A	7: 132,252,063 (GRCm39)	R234Q	probably damaging	Het
Maf1	T	C	15: 76,236,955 (GRCm39)	S65P	possibly damaging	Het
Mgat5	T	A	1: 127,339,868 (GRCm39)	H416Q	probably damaging	Het
Mta2	A	G	19: 8,925,728 (GRCm39)	T408A	probably benign	Het
Neb	T	A	2: 52,145,603 (GRCm39)	I2974F	probably damaging	Het
Neb	C	T	2: 52,101,608 (GRCm39)		probably benign	Het
Or1j19	C	T	2: 36,677,332 (GRCm39)	S265L	possibly damaging	Het
Or2d4	A	G	7: 106,543,870 (GRCm39)	S113P	possibly damaging	Het
Or52p1	A	G	7: 104,267,678 (GRCm39)	H264R	probably damaging	Het
Or5w22	C	T	2: 87,362,461 (GRCm39)	T28I	probably benign	Het
Pcca	T	A	14: 122,820,150 (GRCm39)		probably benign	Het
Prlr	T	C	15: 10,328,451 (GRCm39)	F309L	probably benign	Het
Slc28a1	A	T	7: 80,817,739 (GRCm39)	Y536F	probably benign	Het
Slco1a8	A	G	6: 141,933,486 (GRCm39)	V433A	probably damaging	Het
Stab1	T	A	14: 30,881,228 (GRCm39)	N601Y	probably damaging	Het
Stil	G	T	4: 114,873,372 (GRCm39)	V332F	probably damaging	Het
Stk11	A	G	10: 79,961,311 (GRCm39)		probably null	Het
Tmem59	A	G	4: 107,050,511 (GRCm39)	N147S	probably benign	Het

Other mutations in Adgrb2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00309:Adgrb2	APN	4	129,912,598 (GRCm39)	missense	probably damaging	1.00
IGL00425:Adgrb2	APN	4	129,912,865 (GRCm39)	missense	probably benign	0.09
IGL00490:Adgrb2	APN	4	129,905,665 (GRCm39)	missense	possibly damaging	0.82
IGL00928:Adgrb2	APN	4	129,886,096 (GRCm39)	missense	probably benign
IGL01353:Adgrb2	APN	4	129,906,093 (GRCm39)	missense	probably damaging	1.00
IGL01521:Adgrb2	APN	4	129,886,085 (GRCm39)	missense	probably damaging	0.98
IGL01590:Adgrb2	APN	4	129,907,606 (GRCm39)	splice site	probably benign
IGL01813:Adgrb2	APN	4	129,906,359 (GRCm39)	missense	probably benign	0.00
IGL01831:Adgrb2	APN	4	129,903,187 (GRCm39)	missense	probably damaging	1.00
IGL01939:Adgrb2	APN	4	129,885,925 (GRCm39)	missense	probably damaging	0.99
IGL01960:Adgrb2	APN	4	129,906,177 (GRCm39)	splice site	probably benign
IGL01993:Adgrb2	APN	4	129,912,635 (GRCm39)	missense	possibly damaging	0.94
IGL02646:Adgrb2	APN	4	129,913,075 (GRCm39)	critical splice donor site	probably null
IGL02655:Adgrb2	APN	4	129,885,972 (GRCm39)	nonsense	probably null
IGL02998:Adgrb2	APN	4	129,912,862 (GRCm39)	missense	probably benign	0.15
IGL03372:Adgrb2	APN	4	129,911,362 (GRCm39)	missense	probably benign	0.42
R0098:Adgrb2	UTSW	4	129,901,624 (GRCm39)	missense	probably damaging	0.99
R0206:Adgrb2	UTSW	4	129,886,352 (GRCm39)	missense	probably damaging	1.00
R0311:Adgrb2	UTSW	4	129,910,922 (GRCm39)	missense	probably damaging	1.00
R0380:Adgrb2	UTSW	4	129,901,624 (GRCm39)	missense	probably damaging	0.99
R0382:Adgrb2	UTSW	4	129,901,624 (GRCm39)	missense	probably damaging	0.99
R0492:Adgrb2	UTSW	4	129,901,624 (GRCm39)	missense	probably damaging	0.99
R0544:Adgrb2	UTSW	4	129,911,335 (GRCm39)	missense	probably damaging	0.98
R0965:Adgrb2	UTSW	4	129,886,209 (GRCm39)	small deletion	probably benign
R1458:Adgrb2	UTSW	4	129,908,384 (GRCm39)	missense	possibly damaging	0.48
R1601:Adgrb2	UTSW	4	129,886,630 (GRCm39)	missense	probably benign	0.43
R1711:Adgrb2	UTSW	4	129,886,417 (GRCm39)	missense	probably damaging	1.00
R1758:Adgrb2	UTSW	4	129,905,668 (GRCm39)	missense	probably damaging	1.00
R1783:Adgrb2	UTSW	4	129,903,098 (GRCm39)	missense	possibly damaging	0.61
R1827:Adgrb2	UTSW	4	129,906,350 (GRCm39)	missense	probably damaging	1.00
R1838:Adgrb2	UTSW	4	129,904,024 (GRCm39)	missense	probably benign	0.00
R1881:Adgrb2	UTSW	4	129,904,078 (GRCm39)	missense	probably damaging	1.00
R1888:Adgrb2	UTSW	4	129,907,419 (GRCm39)	missense	probably damaging	1.00
R1888:Adgrb2	UTSW	4	129,907,419 (GRCm39)	missense	probably damaging	1.00
R1894:Adgrb2	UTSW	4	129,907,419 (GRCm39)	missense	probably damaging	1.00
R2275:Adgrb2	UTSW	4	129,900,647 (GRCm39)	missense	probably damaging	1.00
R2926:Adgrb2	UTSW	4	129,902,137 (GRCm39)	missense	probably damaging	1.00
R4472:Adgrb2	UTSW	4	129,902,146 (GRCm39)	missense	probably benign	0.12
R4490:Adgrb2	UTSW	4	129,906,121 (GRCm39)	missense	possibly damaging	0.91
R4499:Adgrb2	UTSW	4	129,886,454 (GRCm39)	missense	probably damaging	0.99
R4758:Adgrb2	UTSW	4	129,903,143 (GRCm39)	missense	probably damaging	1.00
R4900:Adgrb2	UTSW	4	129,907,668 (GRCm39)	missense	probably damaging	1.00
R4904:Adgrb2	UTSW	4	129,906,332 (GRCm39)	missense	possibly damaging	0.50
R4922:Adgrb2	UTSW	4	129,901,645 (GRCm39)	missense	probably damaging	1.00
R5330:Adgrb2	UTSW	4	129,915,995 (GRCm39)	missense	possibly damaging	0.92
R5331:Adgrb2	UTSW	4	129,915,995 (GRCm39)	missense	possibly damaging	0.92
R5550:Adgrb2	UTSW	4	129,908,727 (GRCm39)	critical splice acceptor site	probably null
R5995:Adgrb2	UTSW	4	129,910,896 (GRCm39)	missense	probably damaging	1.00
R6047:Adgrb2	UTSW	4	129,912,498 (GRCm39)	missense	probably damaging	1.00
R6534:Adgrb2	UTSW	4	129,916,012 (GRCm39)	missense	probably damaging	0.98
R6565:Adgrb2	UTSW	4	129,913,069 (GRCm39)	missense	probably damaging	1.00
R6813:Adgrb2	UTSW	4	129,903,284 (GRCm39)	missense	probably damaging	1.00
R6963:Adgrb2	UTSW	4	129,908,155 (GRCm39)	frame shift	probably null
R6966:Adgrb2	UTSW	4	129,908,155 (GRCm39)	frame shift	probably null
R7197:Adgrb2	UTSW	4	129,903,315 (GRCm39)	missense	probably damaging	1.00
R7409:Adgrb2	UTSW	4	129,912,862 (GRCm39)	missense	probably benign	0.15
R7451:Adgrb2	UTSW	4	129,908,350 (GRCm39)	missense	probably damaging	1.00
R7453:Adgrb2	UTSW	4	129,908,430 (GRCm39)	critical splice donor site	probably null
R7461:Adgrb2	UTSW	4	129,915,006 (GRCm39)	critical splice acceptor site	probably benign
R7511:Adgrb2	UTSW	4	129,915,904 (GRCm39)	missense	probably benign
R7613:Adgrb2	UTSW	4	129,915,006 (GRCm39)	critical splice acceptor site	probably benign
R7729:Adgrb2	UTSW	4	129,885,917 (GRCm39)	missense	probably benign	0.09
R7818:Adgrb2	UTSW	4	129,908,762 (GRCm39)	missense	possibly damaging	0.70
R7818:Adgrb2	UTSW	4	129,908,353 (GRCm39)	missense	probably damaging	0.98
R8033:Adgrb2	UTSW	4	129,912,805 (GRCm39)	missense	probably benign
R8039:Adgrb2	UTSW	4	129,916,061 (GRCm39)	missense	probably damaging	0.99
R8097:Adgrb2	UTSW	4	129,901,690 (GRCm39)	missense	probably damaging	1.00
R8256:Adgrb2	UTSW	4	129,901,921 (GRCm39)	missense	probably damaging	0.96
R8425:Adgrb2	UTSW	4	129,898,850 (GRCm39)	missense	possibly damaging	0.72
R8804:Adgrb2	UTSW	4	129,899,212 (GRCm39)	missense	probably damaging	1.00
R9011:Adgrb2	UTSW	4	129,916,111 (GRCm39)	missense	probably damaging	1.00
R9018:Adgrb2	UTSW	4	129,907,659 (GRCm39)	missense	probably benign	0.34
R9102:Adgrb2	UTSW	4	129,912,802 (GRCm39)	missense	probably benign	0.04
R9113:Adgrb2	UTSW	4	129,910,877 (GRCm39)	missense	probably damaging	1.00
R9120:Adgrb2	UTSW	4	129,906,302 (GRCm39)	missense	possibly damaging	0.52
R9211:Adgrb2	UTSW	4	129,886,199 (GRCm39)	missense	probably benign	0.07
R9267:Adgrb2	UTSW	4	129,885,901 (GRCm39)	missense	possibly damaging	0.93
R9328:Adgrb2	UTSW	4	129,915,363 (GRCm39)	missense	probably damaging	1.00
R9470:Adgrb2	UTSW	4	129,903,074 (GRCm39)	missense	probably damaging	1.00
R9608:Adgrb2	UTSW	4	129,907,352 (GRCm39)	missense	probably damaging	0.98
RF020:Adgrb2	UTSW	4	129,903,877 (GRCm39)	missense	probably damaging	1.00
Z1176:Adgrb2	UTSW	4	129,911,356 (GRCm39)	missense	probably damaging	1.00
Z1177:Adgrb2	UTSW	4	129,912,912 (GRCm39)	missense	probably damaging	0.98
Z1177:Adgrb2	UTSW	4	129,905,619 (GRCm39)	missense	probably damaging	0.99

Posted On

2015-04-16