Incidental Mutation 'IGL02700:1700018B08Rik'
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ID304113
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol 1700018B08Rik
Ensembl Gene ENSMUSG00000031809
Gene NameRIKEN cDNA 1700018B08 gene
Synonyms
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.038) question?
Stock #IGL02700
Quality Score
Status
Chromosome8
Chromosomal Location121530780-121544320 bp(-) (GRCm38)
Type of Mutationcritical splice donor site (1 bp from exon)
DNA Base Change (assembly) C to A at 121535422 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000138106 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000034265] [ENSMUST00000127664] [ENSMUST00000182460] [ENSMUST00000182739] [ENSMUST00000183280]
Predicted Effect probably null
Transcript: ENSMUST00000034265
SMART Domains Protein: ENSMUSP00000034265
Gene: ENSMUSG00000031809

DomainStartEndE-ValueType
Pfam:DUF4568 3 213 1.4e-118 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000127664
SMART Domains Protein: ENSMUSP00000118564
Gene: ENSMUSG00000092329

DomainStartEndE-ValueType
Pfam:Glycos_transf_2 104 287 7.4e-31 PFAM
Pfam:Glyco_transf_7C 261 331 4.9e-8 PFAM
RICIN 406 531 9.28e-27 SMART
Predicted Effect probably null
Transcript: ENSMUST00000182460
SMART Domains Protein: ENSMUSP00000138106
Gene: ENSMUSG00000031809

DomainStartEndE-ValueType
Pfam:DUF4568 23 188 7.2e-90 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000182739
Predicted Effect probably benign
Transcript: ENSMUST00000183280
SMART Domains Protein: ENSMUSP00000138141
Gene: ENSMUSG00000031809

DomainStartEndE-ValueType
Pfam:DUF4568 3 48 2.1e-6 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 26 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acacb A G 5: 114,218,881 Y1291C probably damaging Het
Agtpbp1 C T 13: 59,528,419 C179Y probably damaging Het
Capn15 T C 17: 25,963,008 D609G probably damaging Het
Cnnm3 T A 1: 36,513,108 F400I probably damaging Het
Dst A C 1: 34,262,120 E1189A probably damaging Het
Elmsan1 T C 12: 84,152,862 N1028S probably benign Het
Gcnt1 G A 19: 17,329,416 T315I probably damaging Het
H2-M1 T C 17: 36,671,269 I147V possibly damaging Het
Hk1 T C 10: 62,284,811 N536D probably damaging Het
Klhl5 C T 5: 65,131,430 Q12* probably null Het
Lgals12 C T 19: 7,598,090 A294T probably benign Het
Mki67 G T 7: 135,708,202 S173R probably benign Het
Nedd4l C T 18: 65,209,680 R755C probably damaging Het
Obox5 A G 7: 15,758,963 D281G possibly damaging Het
Olfr1310 T C 2: 112,008,691 D165G probably benign Het
Pacs2 T A 12: 113,061,710 I494N probably damaging Het
Pax5 G T 4: 44,682,722 T141K probably damaging Het
Phf21b T C 15: 84,803,461 N230S probably benign Het
Rab3gap1 G T 1: 127,938,605 A841S probably benign Het
Siglecf T C 7: 43,352,378 L204P probably damaging Het
Slc39a10 G A 1: 46,818,128 A696V probably damaging Het
Snca G A 6: 60,827,537 T22I possibly damaging Het
Syvn1 A G 19: 6,047,943 T4A probably benign Het
Usp36 T C 11: 118,276,157 N298S possibly damaging Het
Usp42 A T 5: 143,717,128 S579R probably benign Het
Vezf1 T C 11: 88,073,303 S94P probably damaging Het
Other mutations in 1700018B08Rik
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03124:1700018B08Rik APN 8 121541710 splice site probably benign
R1475:1700018B08Rik UTSW 8 121540588 splice site probably benign
R2883:1700018B08Rik UTSW 8 121539905 missense probably damaging 1.00
R3967:1700018B08Rik UTSW 8 121539980 missense possibly damaging 0.52
R6281:1700018B08Rik UTSW 8 121531881 missense probably damaging 1.00
R6490:1700018B08Rik UTSW 8 121540554 missense probably benign 0.06
R6920:1700018B08Rik UTSW 8 121535421 critical splice donor site probably null
R6934:1700018B08Rik UTSW 8 121539973 missense probably benign 0.05
Posted On2015-04-16