Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02726:Vmn1r27'

305194

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn1r27

Ensembl Gene

ENSMUSG00000071428

Gene Name

vomeronasal 1 receptor 27

Synonyms

V1rc33

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.120) question?

Stock #

IGL02726

Quality Score

Status

Chromosome

Chromosomal Location

58192091-58193002 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 58192854 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Lysine at position 50 (I50K)

Ref Sequence

ENSEMBL: ENSMUSP00000154236 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000095862] [ENSMUST00000226666] [ENSMUST00000228530]

AlphaFold

K7N688

Predicted Effect

possibly damaging
Transcript: ENSMUST00000095862
AA Change: I50K

PolyPhen 2 Score 0.951 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000093547
Gene: ENSMUSG00000071428
AA Change: I50K

Domain	Start	End	E-Value	Type
Pfam:V1R	28	293	4.2e-51	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000226666

Predicted Effect

possibly damaging
Transcript: ENSMUST00000228530
AA Change: I50K

PolyPhen 2 Score 0.951 (Sensitivity: 0.79; Specificity: 0.95)

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 44 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Anapc1	A	T	2: 128,501,705 (GRCm39)	M779K	probably benign	Het
Art1	G	A	7: 101,759,955 (GRCm39)	V85M	probably damaging	Het
Atad2b	G	T	12: 5,024,003 (GRCm39)	E43*	probably null	Het
Clec4a4	A	T	6: 122,967,338 (GRCm39)	I5F	probably damaging	Het
Cr1l	A	T	1: 194,812,188 (GRCm39)	I45N	probably damaging	Het
Dmbt1	T	A	7: 130,676,140 (GRCm39)		probably benign	Het
Dnajb3	A	T	1: 88,133,372 (GRCm39)	V10E	probably damaging	Het
Dnajc22	A	T	15: 98,998,881 (GRCm39)	H22L	probably damaging	Het
Dnal4	A	G	15: 79,647,745 (GRCm39)	V40A	probably damaging	Het
Dsg1b	G	A	18: 20,532,542 (GRCm39)	V529I	probably benign	Het
Elp1	T	A	4: 56,767,878 (GRCm39)		probably null	Het
Fam131c	T	A	4: 141,110,113 (GRCm39)	D170E	probably benign	Het
Got1	G	A	19: 43,488,851 (GRCm39)		probably null	Het
Herc1	T	A	9: 66,349,270 (GRCm39)	V2043E	probably benign	Het
Hmcn1	A	T	1: 150,532,445 (GRCm39)	Y3147*	probably null	Het
Ifi44	T	C	3: 151,455,233 (GRCm39)		probably benign	Het
Il1b	A	T	2: 129,209,242 (GRCm39)	D129E	probably damaging	Het
Ino80	A	T	2: 119,272,964 (GRCm39)	I504N	probably damaging	Het
Itpr2	A	G	6: 146,277,419 (GRCm39)	I655T	probably benign	Het
Kcnk4	A	G	19: 6,904,457 (GRCm39)		probably null	Het
Mrgprb2	T	A	7: 48,202,618 (GRCm39)	R36W	probably damaging	Het
Mslnl	T	C	17: 25,963,077 (GRCm39)		probably null	Het
Or10ak14	T	A	4: 118,610,961 (GRCm39)	Y260F	probably benign	Het
Or1e33	T	C	11: 73,738,691 (GRCm39)	S87G	probably benign	Het
Or2ag1b	A	C	7: 106,288,577 (GRCm39)	Y120*	probably null	Het
Or8k16	G	T	2: 85,520,554 (GRCm39)	L260F	possibly damaging	Het
Pcnx4	G	T	12: 72,620,986 (GRCm39)	M935I	probably benign	Het
Pdgfra	C	T	5: 75,355,618 (GRCm39)	Q1043*	probably null	Het
Pf4	T	C	5: 90,920,523 (GRCm39)	V28A	probably benign	Het
Piezo1	A	G	8: 123,213,894 (GRCm39)	L1689P	probably damaging	Het
Ppa2	A	G	3: 133,076,222 (GRCm39)	S284G	possibly damaging	Het
Pramel22	G	T	4: 143,381,955 (GRCm39)	P247H	probably damaging	Het
Psd2	T	C	18: 36,120,355 (GRCm39)		probably null	Het
Rbm25	G	T	12: 83,719,626 (GRCm39)	G549W	probably damaging	Het
Ryr2	T	C	13: 11,753,206 (GRCm39)	D1705G	probably damaging	Het
Shf	A	T	2: 122,189,969 (GRCm39)	D96E	probably damaging	Het
Slc1a1	G	A	19: 28,889,169 (GRCm39)	V481M	probably benign	Het
Slc4a9	T	C	18: 36,672,670 (GRCm39)	V807A	probably benign	Het
Syne2	T	A	12: 76,062,356 (GRCm39)	I4226N	probably damaging	Het
Tex56	A	G	13: 35,136,943 (GRCm39)		probably benign	Het
Tkfc	A	T	19: 10,573,576 (GRCm39)	V254E	possibly damaging	Het
Ubr2	A	C	17: 47,283,847 (GRCm39)	Y601D	probably damaging	Het
Ubr5	A	C	15: 38,000,806 (GRCm39)		probably benign	Het
Wdr55	A	G	18: 36,896,435 (GRCm39)	E375G	probably benign	Het

Other mutations in Vmn1r27

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00160:Vmn1r27	APN	6	58,192,119 (GRCm39)	missense	probably benign	0.00
IGL01548:Vmn1r27	APN	6	58,192,538 (GRCm39)	missense	probably benign	0.01
IGL02662:Vmn1r27	APN	6	58,192,272 (GRCm39)	missense	probably damaging	1.00
IGL02795:Vmn1r27	APN	6	58,192,287 (GRCm39)	missense	possibly damaging	0.93
IGL03241:Vmn1r27	APN	6	58,192,126 (GRCm39)	missense	probably benign	0.04
IGL03373:Vmn1r27	APN	6	58,192,689 (GRCm39)	missense	probably damaging	1.00
R0119:Vmn1r27	UTSW	6	58,192,704 (GRCm39)	missense	possibly damaging	0.56
R0124:Vmn1r27	UTSW	6	58,192,233 (GRCm39)	missense	probably damaging	1.00
R0136:Vmn1r27	UTSW	6	58,192,704 (GRCm39)	missense	possibly damaging	0.56
R3613:Vmn1r27	UTSW	6	58,192,787 (GRCm39)	missense	probably damaging	1.00
R4192:Vmn1r27	UTSW	6	58,192,812 (GRCm39)	missense	probably damaging	0.99
R4556:Vmn1r27	UTSW	6	58,192,804 (GRCm39)	missense	possibly damaging	0.94
R4831:Vmn1r27	UTSW	6	58,192,827 (GRCm39)	missense	possibly damaging	0.85
R5354:Vmn1r27	UTSW	6	58,192,581 (GRCm39)	missense	probably benign	0.00
R5813:Vmn1r27	UTSW	6	58,192,985 (GRCm39)	missense	possibly damaging	0.76
R6856:Vmn1r27	UTSW	6	58,192,432 (GRCm39)	missense	possibly damaging	0.65
R7653:Vmn1r27	UTSW	6	58,192,879 (GRCm39)	missense	probably benign	0.21
R7653:Vmn1r27	UTSW	6	58,192,785 (GRCm39)	missense	possibly damaging	0.88
R8089:Vmn1r27	UTSW	6	58,192,194 (GRCm39)	missense	possibly damaging	0.82
R8177:Vmn1r27	UTSW	6	58,192,759 (GRCm39)	missense	probably benign	0.00
R9123:Vmn1r27	UTSW	6	58,192,416 (GRCm39)	missense	probably benign	0.00
R9125:Vmn1r27	UTSW	6	58,192,416 (GRCm39)	missense	probably benign	0.00
R9372:Vmn1r27	UTSW	6	58,192,746 (GRCm39)	missense	possibly damaging	0.95
R9422:Vmn1r27	UTSW	6	58,192,867 (GRCm39)	missense	probably benign	0.23

Posted On

2015-04-16