Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02727:Vmn1r178'

305276

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn1r178

Ensembl Gene

ENSMUSG00000062598

Gene Name

vomeronasal 1 receptor 178

Synonyms

V1rd13, LOC232959

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.051) question?

Stock #

IGL02727

Quality Score

Status

Chromosome

Chromosomal Location

23592954-23593868 bp(+) (GRCm39)

Type of Mutation

splice site (3 bp from exon)

DNA Base Change (assembly)

A to G at 23593871 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000077666 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000078593] [ENSMUST00000226450] [ENSMUST00000226489] [ENSMUST00000226640] [ENSMUST00000227993]

AlphaFold

Q8R2B6

Predicted Effect

probably null
Transcript: ENSMUST00000078593

SMART Domains

Protein: ENSMUSP00000077666
Gene: ENSMUSG00000062598

Domain	Start	End	E-Value	Type
Pfam:TAS2R	8	297	7.9e-11	PFAM
Pfam:7tm_1	15	283	2.5e-7	PFAM
Pfam:V1R	41	296	7.8e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000226450

Predicted Effect

probably benign
Transcript: ENSMUST00000226489

Predicted Effect

probably benign
Transcript: ENSMUST00000226640

Predicted Effect

probably benign
Transcript: ENSMUST00000227993

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 44 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700019A02Rik	T	C	1: 53,226,724 (GRCm39)	T13A	probably benign	Het
Aldh1l2	T	A	10: 83,342,469 (GRCm39)	K447I	probably damaging	Het
Ankrd17	A	G	5: 90,392,151 (GRCm39)	S1840P	possibly damaging	Het
Ash1l	A	G	3: 88,930,344 (GRCm39)	I1940M	probably benign	Het
Bfar	T	G	16: 13,506,791 (GRCm39)		probably null	Het
Bicra	G	T	7: 15,713,390 (GRCm39)	H937Q	possibly damaging	Het
Brip1	A	T	11: 86,043,562 (GRCm39)	M334K	probably benign	Het
Camsap2	T	G	1: 136,232,050 (GRCm39)	M182L	probably benign	Het
Chd6	A	T	2: 160,811,383 (GRCm39)	C1407S	probably damaging	Het
Cmya5	A	G	13: 93,234,753 (GRCm39)	S112P	possibly damaging	Het
Csmd1	A	T	8: 16,281,341 (GRCm39)	V728E	probably damaging	Het
Cyp2j6	T	A	4: 96,434,001 (GRCm39)	Q103L	probably benign	Het
Ddias	A	T	7: 92,515,830 (GRCm39)	I21K	probably damaging	Het
Derl2	A	C	11: 70,904,036 (GRCm39)		probably benign	Het
Dgka	A	T	10: 128,558,317 (GRCm39)		probably benign	Het
Dusp11	T	C	6: 85,938,474 (GRCm39)	D15G	probably damaging	Het
Enpp2	T	C	15: 54,773,577 (GRCm39)	D110G	probably damaging	Het
Fkbp11	A	T	15: 98,622,471 (GRCm39)	V134E	probably damaging	Het
Gm3248	T	C	14: 5,945,036 (GRCm38)	T49A	probably damaging	Het
Gm57858	T	A	3: 36,087,065 (GRCm39)	R176S	possibly damaging	Het
Irag2	T	C	6: 145,120,344 (GRCm39)	S520P	possibly damaging	Het
Luzp2	T	C	7: 54,821,939 (GRCm39)		probably benign	Het
Manea	T	A	4: 26,328,126 (GRCm39)	E305V	probably damaging	Het
Manea	C	A	4: 26,328,127 (GRCm39)	E305*	probably null	Het
Megf6	A	G	4: 154,337,606 (GRCm39)		probably null	Het
Mrpl3	G	T	9: 104,931,726 (GRCm39)	D59Y	probably damaging	Het
Myh9	T	C	15: 77,675,942 (GRCm39)	Y248C	probably benign	Het
Nbeal2	G	A	9: 110,468,353 (GRCm39)		probably benign	Het
Or10a5	G	T	7: 106,635,902 (GRCm39)	C180F	probably damaging	Het
Or1f19	T	A	16: 3,411,190 (GRCm39)	I310K	probably benign	Het
Or2y1c	G	T	11: 49,361,893 (GRCm39)	G305V	probably benign	Het
Or8b40	A	G	9: 38,027,808 (GRCm39)	T239A	probably damaging	Het
Pax8	C	A	2: 24,331,642 (GRCm39)	C147F	probably damaging	Het
Phf12	T	C	11: 77,914,493 (GRCm39)	V96A	possibly damaging	Het
Psg18	A	T	7: 18,079,875 (GRCm39)	I442K	probably damaging	Het
Pygl	T	A	12: 70,254,442 (GRCm39)		probably null	Het
Rassf2	C	A	2: 131,846,307 (GRCm39)	R150L	probably benign	Het
Rdh7	A	T	10: 127,723,487 (GRCm39)	W123R	probably damaging	Het
Saal1	T	C	7: 46,339,223 (GRCm39)		probably null	Het
Sall1	T	C	8: 89,757,383 (GRCm39)	D907G	probably damaging	Het
Spag1	T	A	15: 36,234,964 (GRCm39)	F876I	probably damaging	Het
Syncrip	G	A	9: 88,361,932 (GRCm39)	A61V	probably damaging	Het
Trbv3	A	T	6: 41,025,576 (GRCm39)	K55N	probably benign	Het
Vmn2r84	T	C	10: 130,229,995 (GRCm39)	D39G	possibly damaging	Het

Other mutations in Vmn1r178

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01697:Vmn1r178	APN	7	23,593,114 (GRCm39)	missense	probably damaging	0.99
IGL01781:Vmn1r178	APN	7	23,593,434 (GRCm39)	missense	probably damaging	1.00
IGL01934:Vmn1r178	APN	7	23,593,362 (GRCm39)	missense	probably damaging	1.00
IGL02571:Vmn1r178	APN	7	23,593,660 (GRCm39)	missense	probably damaging	0.99
IGL03112:Vmn1r178	APN	7	23,593,086 (GRCm39)	missense	probably damaging	1.00
R0112:Vmn1r178	UTSW	7	23,593,609 (GRCm39)	missense	possibly damaging	0.93
R0830:Vmn1r178	UTSW	7	23,593,452 (GRCm39)	missense	possibly damaging	0.91
R1186:Vmn1r178	UTSW	7	23,593,317 (GRCm39)	nonsense	probably null
R1340:Vmn1r178	UTSW	7	23,593,281 (GRCm39)	missense	probably benign	0.34
R1640:Vmn1r178	UTSW	7	23,593,548 (GRCm39)	missense	possibly damaging	0.70
R1696:Vmn1r178	UTSW	7	23,593,625 (GRCm39)	missense	probably damaging	0.99
R1746:Vmn1r178	UTSW	7	23,593,329 (GRCm39)	missense	probably benign	0.00
R3084:Vmn1r178	UTSW	7	23,593,331 (GRCm39)	missense	possibly damaging	0.94
R4368:Vmn1r178	UTSW	7	23,593,447 (GRCm39)	missense	probably damaging	1.00
R5199:Vmn1r178	UTSW	7	23,593,814 (GRCm39)	missense	probably benign	0.11
R6380:Vmn1r178	UTSW	7	23,592,984 (GRCm39)	missense	possibly damaging	0.62
R7000:Vmn1r178	UTSW	7	23,593,762 (GRCm39)	missense	probably benign	0.21
R7142:Vmn1r178	UTSW	7	23,593,035 (GRCm39)	missense	probably damaging	1.00
R7268:Vmn1r178	UTSW	7	23,593,378 (GRCm39)	missense	probably benign	0.05
R8829:Vmn1r178	UTSW	7	23,593,264 (GRCm39)	missense	probably damaging	1.00
R8832:Vmn1r178	UTSW	7	23,593,264 (GRCm39)	missense	probably damaging	1.00
R9068:Vmn1r178	UTSW	7	23,593,404 (GRCm39)	missense	probably damaging	1.00
R9798:Vmn1r178	UTSW	7	23,593,733 (GRCm39)	nonsense	probably null

Posted On

2015-04-16