Incidental Mutation 'IGL02734:Or5t5'
| ID |
305581 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or5t5
|
| Ensembl Gene |
ENSMUSG00000047969 |
| Gene Name |
olfactory receptor family 5 subfamily T member 5 |
| Synonyms |
MOR179-6, Olfr1093, GA_x6K02T2Q125-48278396-48279364 |
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.354)
|
| Stock # |
IGL02734
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
86612889-86617135 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 86616712 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Histidine
at position 213
(Y213H)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151453
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000055273]
[ENSMUST00000213354]
[ENSMUST00000219561]
|
| AlphaFold |
Q8VF14 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000055273
AA Change: Y213H
PolyPhen 2
Score 0.130 (Sensitivity: 0.93; Specificity: 0.86)
|
| SMART Domains |
Protein: ENSMUSP00000049733
Gene: ENSMUSG00000047969
AA Change: Y213H
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
43 |
319 |
2.4e-49 |
PFAM |
|
Pfam:7tm_1
|
53 |
302 |
1.3e-16 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213354
AA Change: Y213H
PolyPhen 2
Score 0.130 (Sensitivity: 0.93; Specificity: 0.86)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000219561
AA Change: Y213H
PolyPhen 2
Score 0.130 (Sensitivity: 0.93; Specificity: 0.86)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 26 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aadacl4fm5 |
T |
A |
4: 144,506,349 (GRCm39) |
D114V |
probably damaging |
Het |
| Adam26a |
A |
G |
8: 44,022,812 (GRCm39) |
V226A |
probably benign |
Het |
| Anapc4 |
T |
A |
5: 53,018,633 (GRCm39) |
V525E |
probably benign |
Het |
| Apip |
C |
T |
2: 102,919,889 (GRCm39) |
|
probably benign |
Het |
| Bak1 |
A |
G |
17: 27,239,927 (GRCm39) |
V203A |
possibly damaging |
Het |
| Bche |
T |
A |
3: 73,609,409 (GRCm39) |
T6S |
probably benign |
Het |
| Ceacam5 |
T |
A |
7: 17,484,737 (GRCm39) |
V493D |
probably damaging |
Het |
| Cstf3 |
T |
A |
2: 104,439,539 (GRCm39) |
|
probably benign |
Het |
| Fam227a |
A |
T |
15: 79,502,042 (GRCm39) |
|
probably benign |
Het |
| Fbln1 |
G |
T |
15: 85,111,182 (GRCm39) |
C112F |
probably damaging |
Het |
| Gm12695 |
G |
A |
4: 96,612,267 (GRCm39) |
R499* |
probably null |
Het |
| Igdcc4 |
T |
G |
9: 65,038,738 (GRCm39) |
S887A |
possibly damaging |
Het |
| Itgb4 |
G |
T |
11: 115,896,792 (GRCm39) |
R1470L |
probably benign |
Het |
| Kif1a |
T |
C |
1: 92,990,280 (GRCm39) |
E480G |
probably damaging |
Het |
| Mgam |
T |
A |
6: 40,639,628 (GRCm39) |
F497L |
probably damaging |
Het |
| Or4a74 |
T |
C |
2: 89,440,303 (GRCm39) |
I48V |
probably benign |
Het |
| Or5ar1 |
T |
G |
2: 85,671,883 (GRCm39) |
D84A |
possibly damaging |
Het |
| Prl7a2 |
A |
T |
13: 27,843,190 (GRCm39) |
D204E |
probably benign |
Het |
| Shd |
A |
G |
17: 56,278,632 (GRCm39) |
Y65C |
probably damaging |
Het |
| Slc25a39 |
A |
G |
11: 102,295,349 (GRCm39) |
V207A |
probably benign |
Het |
| Sptlc2 |
T |
C |
12: 87,402,444 (GRCm39) |
T161A |
probably damaging |
Het |
| Srrm1 |
G |
A |
4: 135,052,415 (GRCm39) |
P658L |
unknown |
Het |
| Tacc2 |
G |
T |
7: 130,227,829 (GRCm39) |
V1505L |
probably damaging |
Het |
| Taf6 |
T |
C |
5: 138,182,118 (GRCm39) |
K76E |
possibly damaging |
Het |
| Trak2 |
G |
A |
1: 58,949,222 (GRCm39) |
T526M |
probably benign |
Het |
| Zc3h4 |
T |
C |
7: 16,157,849 (GRCm39) |
I353T |
unknown |
Het |
|
| Other mutations in Or5t5 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02147:Or5t5
|
APN |
2 |
86,616,494 (GRCm39) |
missense |
probably benign |
0.19 |
|
IGL02337:Or5t5
|
APN |
2 |
86,616,518 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0379:Or5t5
|
UTSW |
2 |
86,616,079 (GRCm39) |
missense |
probably benign |
|
|
R0526:Or5t5
|
UTSW |
2 |
86,616,691 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R3959:Or5t5
|
UTSW |
2 |
86,616,340 (GRCm39) |
missense |
probably benign |
0.04 |
|
R5635:Or5t5
|
UTSW |
2 |
86,616,070 (GRCm39) |
splice site |
probably null |
|
|
R5951:Or5t5
|
UTSW |
2 |
86,616,571 (GRCm39) |
missense |
probably benign |
|
|
R6932:Or5t5
|
UTSW |
2 |
86,616,499 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7289:Or5t5
|
UTSW |
2 |
86,617,034 (GRCm39) |
missense |
probably benign |
|
|
R7432:Or5t5
|
UTSW |
2 |
86,616,565 (GRCm39) |
nonsense |
probably null |
|
|
R8383:Or5t5
|
UTSW |
2 |
86,616,874 (GRCm39) |
missense |
probably benign |
0.05 |
|
R9235:Or5t5
|
UTSW |
2 |
86,616,548 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9688:Or5t5
|
UTSW |
2 |
86,617,005 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1088:Or5t5
|
UTSW |
2 |
86,616,817 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2015-04-16 |
Incidental Mutation