Incidental Mutation 'IGL02746:Stard13'
ID306065
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Stard13
Ensembl Gene ENSMUSG00000016128
Gene NameStAR-related lipid transfer (START) domain containing 13
SynonymsGT650, DLC2
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL02746
Quality Score
Status
Chromosome5
Chromosomal Location151037510-151233836 bp(-) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) A to G at 151046857 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000144056 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000062015] [ENSMUST00000110483] [ENSMUST00000202111]
Predicted Effect probably benign
Transcript: ENSMUST00000062015
SMART Domains Protein: ENSMUSP00000053232
Gene: ENSMUSG00000016128

DomainStartEndE-ValueType
Pfam:SAM_2 59 120 2.6e-6 PFAM
low complexity region 197 216 N/A INTRINSIC
low complexity region 322 340 N/A INTRINSIC
low complexity region 473 486 N/A INTRINSIC
low complexity region 612 624 N/A INTRINSIC
RhoGAP 693 884 2.37e-50 SMART
START 927 1129 2.08e-40 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000110483
SMART Domains Protein: ENSMUSP00000106109
Gene: ENSMUSG00000016128

DomainStartEndE-ValueType
PDB:2JW2|A 50 120 1e-37 PDB
low complexity region 197 216 N/A INTRINSIC
low complexity region 322 340 N/A INTRINSIC
low complexity region 473 486 N/A INTRINSIC
low complexity region 612 624 N/A INTRINSIC
RhoGAP 674 865 2.37e-50 SMART
START 908 1110 2.08e-40 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000202111
SMART Domains Protein: ENSMUSP00000144056
Gene: ENSMUSG00000016128

DomainStartEndE-ValueType
low complexity region 79 98 N/A INTRINSIC
low complexity region 204 222 N/A INTRINSIC
low complexity region 355 368 N/A INTRINSIC
low complexity region 494 506 N/A INTRINSIC
RhoGAP 556 747 1.4e-52 SMART
START 790 992 1.4e-42 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein which contains an N-terminal sterile alpha motif (SAM) for protein-protein interactions, followed by an ATP/GTP-binding motif, a GTPase-activating protein (GAP) domain, and a C-terminal STAR-related lipid transfer (START) domain. It may be involved in regulation of cytoskeletal reorganization, cell proliferation, and cell motility, and acts as a tumor suppressor in hepatoma cells. The gene is located in a region of chromosome 13 that is associated with loss of heterozygosity in hepatocellular carcinomas. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit small body size, decreased weight, and reduced adipose tissue. Mice homozygous for another knock-out allele exhibit increased angiogenesis in matrigel plugs and implanted tumors. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2m G A 6: 121,669,503 probably benign Het
Adck5 A T 15: 76,589,154 M68L probably benign Het
Aox3 T C 1: 58,183,542 S1165P possibly damaging Het
Arhgap23 A G 11: 97,454,204 probably benign Het
Brdt T C 5: 107,370,324 L771P probably benign Het
Ccdc134 T A 15: 82,131,737 probably benign Het
Cdc42bpa T A 1: 180,111,747 D41E possibly damaging Het
Cdkn2aipnl A G 11: 51,970,220 T106A probably damaging Het
Cox10 G A 11: 63,964,531 probably benign Het
Cubn C A 2: 13,445,040 C891F probably damaging Het
Cyb5rl A G 4: 107,068,639 E6G probably benign Het
Dhrs2 T C 14: 55,241,171 S258P probably damaging Het
Dnah10 T C 5: 124,730,086 L145P possibly damaging Het
Epc1 A G 18: 6,454,317 I129T probably benign Het
Gkn3 A G 6: 87,387,357 probably benign Het
Gls2 A G 10: 128,200,956 D202G probably damaging Het
Golph3 C T 15: 12,349,415 R174W probably damaging Het
Gpatch4 A C 3: 88,054,391 E119A possibly damaging Het
Hemgn A G 4: 46,400,740 L40P probably damaging Het
Ifi27l2b A T 12: 103,451,234 D231E unknown Het
Klf12 T C 14: 99,900,220 I297V probably benign Het
Lzts3 T C 2: 130,636,341 N165S probably damaging Het
Nlrp4e G A 7: 23,321,839 V584I probably benign Het
Npas4 T C 19: 4,986,667 T490A probably damaging Het
Pikfyve C A 1: 65,234,272 H615Q probably damaging Het
Plce1 T A 19: 38,698,472 L608Q probably damaging Het
Pou2f3 T G 9: 43,146,846 Q67H probably benign Het
Rev3l T C 10: 39,824,589 L1694P probably damaging Het
RP24-77E13.10 A G 7: 7,240,179 F24S probably damaging Het
Rpl4 A G 9: 64,175,650 T117A probably benign Het
Scn5a T C 9: 119,550,637 N194D probably damaging Het
Sec16b T A 1: 157,546,289 probably benign Het
Slc12a5 A T 2: 164,974,916 M97L probably benign Het
Stau1 A C 2: 166,954,898 probably null Het
Thg1l A T 11: 45,948,227 C219* probably null Het
Togaram1 G T 12: 64,966,496 E174* probably null Het
Vmn1r237 T C 17: 21,314,218 S68P possibly damaging Het
Vmn2r3 A T 3: 64,259,818 S631T possibly damaging Het
Other mutations in Stard13
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00639:Stard13 APN 5 151042239 missense probably damaging 1.00
IGL01362:Stard13 APN 5 151189952 missense probably benign 0.05
IGL01588:Stard13 APN 5 151045237 missense probably damaging 1.00
IGL01947:Stard13 APN 5 151062844 missense probably damaging 1.00
IGL02294:Stard13 APN 5 151063115 missense probably benign 0.19
IGL02713:Stard13 APN 5 151042186 nonsense probably null
IGL02827:Stard13 APN 5 151063126 missense probably benign 0.07
R0498:Stard13 UTSW 5 151052477 missense probably damaging 1.00
R1427:Stard13 UTSW 5 151045991 missense probably damaging 0.99
R1785:Stard13 UTSW 5 151045168 missense probably damaging 1.00
R1857:Stard13 UTSW 5 151095438 missense probably damaging 1.00
R1858:Stard13 UTSW 5 151095438 missense probably damaging 1.00
R2130:Stard13 UTSW 5 151045168 missense probably damaging 1.00
R2131:Stard13 UTSW 5 151045168 missense probably damaging 1.00
R2132:Stard13 UTSW 5 151045168 missense probably damaging 1.00
R2133:Stard13 UTSW 5 151045168 missense probably damaging 1.00
R2258:Stard13 UTSW 5 151039731 missense probably damaging 1.00
R3435:Stard13 UTSW 5 151042179 missense probably damaging 1.00
R4080:Stard13 UTSW 5 151092829 critical splice acceptor site probably null
R4081:Stard13 UTSW 5 151092829 critical splice acceptor site probably null
R4082:Stard13 UTSW 5 151092829 critical splice acceptor site probably null
R4233:Stard13 UTSW 5 151062699 missense probably benign 0.00
R4288:Stard13 UTSW 5 151045177 missense probably damaging 1.00
R4303:Stard13 UTSW 5 151062869 missense possibly damaging 0.82
R4659:Stard13 UTSW 5 151062788 missense probably benign 0.01
R4695:Stard13 UTSW 5 151060815 missense probably benign 0.08
R4910:Stard13 UTSW 5 151062527 missense probably benign
R5135:Stard13 UTSW 5 151062767 nonsense probably null
R5338:Stard13 UTSW 5 151059598 missense probably damaging 1.00
R5399:Stard13 UTSW 5 151047801 nonsense probably null
R5546:Stard13 UTSW 5 151045901 missense probably benign 0.03
R5685:Stard13 UTSW 5 151063127 missense possibly damaging 0.78
R5771:Stard13 UTSW 5 151190011 missense probably damaging 1.00
R6034:Stard13 UTSW 5 151095500 splice site probably null
R6034:Stard13 UTSW 5 151095500 splice site probably null
R6141:Stard13 UTSW 5 151042242 missense probably damaging 1.00
R6171:Stard13 UTSW 5 151092762 missense probably damaging 1.00
R6296:Stard13 UTSW 5 151062673 missense probably damaging 1.00
R6326:Stard13 UTSW 5 151046919 missense possibly damaging 0.95
R6508:Stard13 UTSW 5 151063289 missense probably benign 0.06
Posted On2015-04-16