Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00973:Tubb4b-ps1'

306627

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Tubb4b-ps1

Ensembl Gene

ENSMUSG00000095159

Gene Name

tubulin, beta 4B class IVB, pseudogene 1

Synonyms

Tubb2c-ps1, Tubb2c2, ENSMUSG00000056506

Accession Numbers

Essential gene?

Not available question?

Stock #

IGL00973

Quality Score

Status

Chromosome

Chromosomal Location

7229365-7230700 bp(+) (GRCm39)

Type of Mutation

intron

DNA Base Change (assembly)

A to G at 7229408 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000143568 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000200317]

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000082917

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000179460

SMART Domains

Protein: ENSMUSP00000136922
Gene: ENSMUSG00000095159

Domain	Start	End	E-Value	Type
Tubulin	47	243	6.6e-61	SMART
Tubulin_C	245	382	4.17e-49	SMART
low complexity region	427	444	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000200317

SMART Domains

Protein: ENSMUSP00000143568
Gene: ENSMUSG00000092094

Domain	Start	End	E-Value	Type
ZnF_C2H2	56	80	2e-2	SMART
low complexity region	958	970	N/A	INTRINSIC
low complexity region	1155	1179	N/A	INTRINSIC
low complexity region	1196	1207	N/A	INTRINSIC
low complexity region	1215	1234	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 31 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Atp10a	G	T	7: 58,457,218 (GRCm39)	D906Y	probably damaging	Het
Cdh18	A	G	15: 23,173,882 (GRCm39)	K32R	probably damaging	Het
Chtf18	G	A	17: 25,941,090 (GRCm39)	A636V	probably benign	Het
Clcn6	A	G	4: 148,098,245 (GRCm39)		probably benign	Het
Dspp	A	C	5: 104,324,758 (GRCm39)	K374Q	possibly damaging	Het
Ehmt2	C	T	17: 35,129,791 (GRCm39)	R962C	probably damaging	Het
Frrs1l	T	C	4: 56,972,369 (GRCm39)	K111E	probably damaging	Het
Galnt5	A	G	2: 57,888,951 (GRCm39)	T184A	probably benign	Het
Glud1	C	T	14: 34,041,899 (GRCm39)	T169I	probably damaging	Het
Hinfp	T	G	9: 44,209,436 (GRCm39)	D283A	probably benign	Het
Hmcn2	C	T	2: 31,273,833 (GRCm39)		probably benign	Het
Hs6st3	A	T	14: 120,106,819 (GRCm39)	Y409F	possibly damaging	Het
Ighv15-2	A	T	12: 114,528,490 (GRCm39)	V20D	possibly damaging	Het
Kif17	A	G	4: 138,002,368 (GRCm39)	T91A	probably benign	Het
Mical3	T	C	6: 120,911,885 (GRCm39)		probably benign	Het
Myo1e	C	T	9: 70,246,069 (GRCm39)	T420M	probably damaging	Het
Or8b12c	C	A	9: 37,716,078 (GRCm39)	S290R	probably damaging	Het
Ovgp1	T	A	3: 105,888,593 (GRCm39)	Y316*	probably null	Het
Plekha1	T	A	7: 130,512,743 (GRCm39)	V313D	probably damaging	Het
Polr1e	C	A	4: 45,031,364 (GRCm39)		probably benign	Het
Prdm15	A	T	16: 97,607,367 (GRCm39)		probably benign	Het
Ptpn4	T	A	1: 119,669,101 (GRCm39)	M250L	probably benign	Het
Rtn1	A	T	12: 72,455,285 (GRCm39)	L14Q	probably benign	Het
Sec24a	T	C	11: 51,620,404 (GRCm39)		probably null	Het
Sox7	A	G	14: 64,185,636 (GRCm39)	H224R	probably benign	Het
Styxl2	T	C	1: 165,927,027 (GRCm39)	S862G	probably benign	Het
Sucla2	T	C	14: 73,828,347 (GRCm39)	I318T	possibly damaging	Het
Ube2o	T	A	11: 116,432,031 (GRCm39)	K940M	probably damaging	Het
Usp20	A	C	2: 30,894,962 (GRCm39)	N149T	probably damaging	Het
Utp6	C	T	11: 79,846,531 (GRCm39)	W150*	probably null	Het
Wdr27	A	C	17: 15,134,140 (GRCm39)	H475Q	probably benign	Het

Other mutations in Tubb4b-ps1

Allele	Source	Chr	Coord	Type	Predicted Effect
IGL01861:Tubb4b-ps1	APN	5	7,229,374 (GRCm39)	intron	probably benign
IGL01980:Tubb4b-ps1	APN	5	7,229,843 (GRCm39)	intron	probably benign
IGL02336:Tubb4b-ps1	APN	5	7,229,952 (GRCm39)	intron	probably benign
IGL03152:Tubb4b-ps1	APN	5	7,230,001 (GRCm39)	intron	probably benign
IGL03166:Tubb4b-ps1	APN	5	7,229,965 (GRCm39)	intron	probably benign
IGL03279:Tubb4b-ps1	APN	5	7,229,630 (GRCm39)	intron	probably benign

Posted On

2015-04-16