Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00990:Sp110'

306675

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Sp110

Ensembl Gene

ENSMUSG00000070034

Gene Name

Sp110 nuclear body protein

Synonyms

Ifi75, 5830484A20Rik, 5031415C07Rik, Ipr1, 52kDa

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.572) question?

Stock #

IGL00990

Quality Score

Status

Chromosome

Chromosomal Location

85504620-85526538 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 85514002 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Cysteine at position 252 (R252C)

Ref Sequence

ENSEMBL: ENSMUSP00000091226 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000093508]

AlphaFold

Q8BVK9

PDB Structure

Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik) [SOLUTION NMR]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000093508
AA Change: R252C

PolyPhen 2 Score 0.511 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000091226
Gene: ENSMUSG00000070034
AA Change: R252C

Domain	Start	End	E-Value	Type
Pfam:Sp100	8	106	2.3e-41	PFAM
low complexity region	242	254	N/A	INTRINSIC
low complexity region	259	269	N/A	INTRINSIC
SAND	360	433	3.55e-28	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000128339

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000131950

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000186740

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 150 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adcy8	C	A	15: 64,694,162 (GRCm39)	V372L	probably benign	Het
Bod1l	T	C	5: 41,986,208 (GRCm39)	D458G	probably benign	Het
Cacna1c	G	T	6: 118,590,256 (GRCm39)	H1416N	probably damaging	Het
Cacna2d1	T	C	5: 16,140,067 (GRCm39)	I19T	probably benign	Het
Cadps	T	A	14: 12,715,374 (GRCm38)	T153S	possibly damaging	Het
Cd200r1	A	T	16: 44,614,672 (GRCm39)	D317V	possibly damaging	Het
Cimap1c	T	C	9: 56,756,341 (GRCm39)	E225G	probably benign	Het
Dcaf5	C	T	12: 80,385,606 (GRCm39)	R840H	probably benign	Het
Dnhd1	A	C	7: 105,370,895 (GRCm39)	H4725P	possibly damaging	Het
Echdc3	C	A	2: 6,200,538 (GRCm39)	L149F	probably benign	Het
Efhb	T	G	17: 53,769,649 (GRCm39)	Q220P	possibly damaging	Het
Efr3b	A	T	12: 4,025,411 (GRCm39)	Y18*	probably null	Het
Eri1	T	C	8: 35,949,836 (GRCm39)	K41R	possibly damaging	Het
Eri1	C	A	8: 35,949,800 (GRCm39)	G53V	probably benign	Het
Gm10212	A	G	19: 11,546,924 (GRCm39)		noncoding transcript	Het
Gm11168	T	G	9: 3,005,124 (GRCm39)	F201C	probably damaging	Het
Gm14412	A	C	2: 177,007,479 (GRCm39)	S139A	probably benign	Het
Gm21411	C	T	4: 146,977,067 (GRCm39)	S69N	possibly damaging	Het
Gm21738	A	G	14: 19,418,885 (GRCm38)	C16R	probably benign	Het
Gm21967	T	A	13: 120,071,071 (GRCm39)		probably benign	Het
Gm4952	A	T	19: 12,600,987 (GRCm39)	D69V	probably damaging	Het
Gm5591	T	G	7: 38,219,838 (GRCm39)	K345T	probably benign	Het
Gm7647	T	C	5: 95,110,839 (GRCm39)	S7P	probably benign	Het
Gm9758	G	A	5: 14,963,522 (GRCm39)		probably benign	Het
Gtse1	C	A	15: 85,753,018 (GRCm39)	Q378K	possibly damaging	Het
Haus3	T	C	5: 34,323,690 (GRCm39)	K307E	probably benign	Het
Hjurp	A	G	1: 88,197,991 (GRCm39)	L96S	probably benign	Het
Ifi205	T	A	1: 173,854,899 (GRCm39)		probably benign	Het
Ighg1	A	G	12: 113,292,804 (GRCm39)	V255A	unknown	Het
Ighv14-4	T	A	12: 114,140,252 (GRCm39)	M49L	probably benign	Het
Jak1	A	C	4: 101,028,554 (GRCm39)	L508R	probably damaging	Het
Kif18a	A	G	2: 109,164,767 (GRCm39)	Q821R	probably benign	Het
Kif21b	T	C	1: 136,080,080 (GRCm39)	S539P	possibly damaging	Het
Klhdc2	T	C	12: 69,353,987 (GRCm39)	V266A	probably benign	Het
Lonp2	G	T	8: 87,368,161 (GRCm39)		probably benign	Het
Mpdz	C	T	4: 81,221,821 (GRCm39)		probably benign	Het
Mroh2a	G	T	1: 88,172,692 (GRCm39)	M823I	probably benign	Het
Mroh2a	G	A	1: 88,161,842 (GRCm39)	G309D	possibly damaging	Het
Mroh2a	G	A	1: 88,158,468 (GRCm39)	E172K	probably damaging	Het
Mtif3	C	A	5: 146,895,914 (GRCm39)	G58*	probably null	Het
Muc4	C	T	16: 32,576,179 (GRCm39)		probably benign	Het
Muc4	C	T	16: 32,575,114 (GRCm39)	P1233L	probably benign	Het
Muc4	G	T	16: 32,575,139 (GRCm39)	K1241N	probably benign	Het
Muc4	G	A	16: 32,575,140 (GRCm39)	G1242R	probably benign	Het
Muc4	T	G	16: 32,753,863 (GRCm38)	N1246K	probably benign	Het
Muc4	A	T	16: 32,753,886 (GRCm38)	E1254V	probably benign	Het
Muc4	C	T	16: 32,752,569 (GRCm38)	P816S	probably benign	Het
Muc4	A	G	16: 32,575,362 (GRCm39)	R1316G	probably benign	Het
Muc4	C	A	16: 32,575,246 (GRCm39)	T1277K	possibly damaging	Het
Muc6	C	T	7: 141,638,890 (GRCm38)	A1957T	possibly damaging	Het
Naca	T	A	10: 127,879,669 (GRCm39)		probably benign	Het
Nars2	A	T	7: 96,651,997 (GRCm39)		probably benign	Het
Or1j14	A	C	2: 36,418,005 (GRCm39)	I194L	probably benign	Het
Or52b3	G	T	7: 102,204,098 (GRCm39)	L202F	probably damaging	Het
Or5b12b	G	T	19: 12,861,265 (GRCm39)	V7L	probably benign	Het
Or6c216	T	C	10: 129,678,342 (GRCm39)	T190A	probably damaging	Het
Pcdh7	G	A	5: 57,877,806 (GRCm39)	E454K	possibly damaging	Het
Pip5kl1	C	A	2: 32,473,359 (GRCm39)	A332D	probably benign	Het
Pisd	A	T	5: 32,896,702 (GRCm39)	S280T	probably benign	Het
Pramel34	T	A	5: 93,784,336 (GRCm39)	Q376L	probably damaging	Het
Pramel5	A	G	4: 144,000,549 (GRCm39)	L9P	probably damaging	Het
Prkd3	G	T	17: 79,261,952 (GRCm39)	N787K	probably benign	Het
Prkdc	A	T	16: 15,519,979 (GRCm39)	H1139L	probably benign	Het
R3hdm1	A	G	1: 128,089,933 (GRCm39)		probably benign	Het
Rbfox2	T	C	15: 76,987,136 (GRCm39)	N206D	probably damaging	Het
Rlf	T	C	4: 121,005,536 (GRCm39)	E1258G	possibly damaging	Het
Rpl8	T	C	15: 76,789,242 (GRCm39)		probably benign	Het
Senp5	A	C	16: 31,809,092 (GRCm39)	V27G	probably benign	Het
Serpina1b	T	A	12: 103,694,525 (GRCm39)	K406N	probably damaging	Het
Sfi1	C	T	11: 3,085,671 (GRCm39)	A853T	probably damaging	Het
Sfi1	T	C	11: 3,093,689 (GRCm39)		probably benign	Het
Sfi1	G	A	11: 3,084,337 (GRCm39)	A975V	probably benign	Het
Shc1	T	C	3: 89,331,536 (GRCm39)	S154P	probably damaging	Het
Sirpd	C	T	3: 15,397,205 (GRCm39)		probably null	Het
Skint5	A	G	4: 113,400,070 (GRCm39)		probably null	Het
Slc17a8	T	C	10: 89,412,392 (GRCm39)	D531G	probably benign	Het
Slc4a10	A	C	2: 62,117,284 (GRCm39)	T718P	probably damaging	Het
Slc7a11	C	T	3: 50,333,518 (GRCm39)	R411Q	probably damaging	Het
Slitrk3	A	G	3: 72,957,414 (GRCm39)	F453L	probably damaging	Het
Slk	A	C	19: 47,568,691 (GRCm39)	Q20P	probably damaging	Het
Smg5	T	C	3: 88,250,345 (GRCm39)		probably null	Het
Sp140	G	A	1: 85,553,854 (GRCm39)	R231K	probably benign	Het
Sp140	C	T	1: 85,553,886 (GRCm39)	R242C	possibly damaging	Het
Speer4a3	A	C	5: 26,159,222 (GRCm39)	W41G	probably benign	Het
Speer4b	G	A	5: 27,706,272 (GRCm39)	P30S	probably damaging	Het
Spef1l	A	C	7: 139,558,016 (GRCm39)	V60G	probably damaging	Het
Stim1	T	A	7: 102,075,954 (GRCm39)	H395Q	probably damaging	Het
Sult2a1	T	C	7: 13,537,961 (GRCm39)	I187M	probably benign	Het
Thap1	G	A	8: 26,652,759 (GRCm39)	D189N	probably benign	Het
Thap1	C	T	8: 26,650,910 (GRCm39)	P37L	possibly damaging	Het
Thrap3	C	T	4: 126,059,188 (GRCm39)		probably benign	Het
Tmem132d	C	T	5: 127,861,896 (GRCm39)	V742I	possibly damaging	Het
Tmprss9	A	G	10: 80,728,126 (GRCm39)	D572G	possibly damaging	Het
Tmtc1	T	G	6: 148,345,442 (GRCm39)	T86P	probably benign	Het
Trip12	A	T	1: 84,729,605 (GRCm39)	N1026K	probably damaging	Het
Ttll5	T	A	12: 85,923,363 (GRCm39)	V280E	probably damaging	Het
Ubn2	T	A	6: 38,459,540 (GRCm39)	D592E	possibly damaging	Het
Ubr1	T	G	2: 120,761,353 (GRCm39)	H608P	probably damaging	Het
Ugt1a6b	A	T	1: 88,142,900 (GRCm39)		probably null	Het
Vmn1r77	C	A	7: 11,775,695 (GRCm39)	S89Y	probably benign	Het
Vmn1r77	A	C	7: 11,775,403 (GRCm39)	I60L	probably benign	Het
Vmn2r114	G	A	17: 23,509,939 (GRCm39)	A847V	probably benign	Het
Vmn2r114	A	T	17: 23,510,212 (GRCm39)	L756Q	probably damaging	Het
Vmn2r114	G	T	17: 23,509,957 (GRCm39)	S841Y	probably benign	Het
Vmn2r115	G	A	17: 23,578,753 (GRCm39)	G742D	probably damaging	Het
Vmn2r115	C	T	17: 23,565,238 (GRCm39)	S375F	probably benign	Het
Vmn2r115	A	G	17: 23,575,934 (GRCm39)	M511V	probably benign	Het
Vmn2r115	A	G	17: 23,565,346 (GRCm39)	Q411R	probably benign	Het
Vmn2r115	C	T	17: 23,565,345 (GRCm39)	Q411*	probably null	Het
Vmn2r115	C	T	17: 23,578,371 (GRCm39)	P615S	probably damaging	Het
Vmn2r115	A	G	17: 23,565,135 (GRCm39)	N341D	probably benign	Het
Vmn2r115	G	A	17: 23,565,252 (GRCm39)	E380K	probably benign	Het
Vmn2r115	A	C	17: 23,565,313 (GRCm39)	N400T	probably damaging	Het
Vmn2r115	T	A	17: 23,578,798 (GRCm39)	L757Q	probably damaging	Het
Vmn2r115	G	T	17: 23,567,008 (GRCm39)	G507*	probably null	Het
Vmn2r115	A	T	17: 23,565,180 (GRCm39)	M356L	possibly damaging	Het
Vmn2r115	C	T	17: 23,565,150 (GRCm39)	P346S	probably benign	Het
Vmn2r115	G	T	17: 23,578,323 (GRCm39)	A599S	probably benign	Het
Vmn2r116	C	T	17: 23,606,210 (GRCm39)	S374F	probably benign	Het
Vmn2r116	C	T	17: 23,616,701 (GRCm39)	P540S	probably damaging	Het
Vmn2r117	T	G	17: 23,694,403 (GRCm39)	K481N	probably damaging	Het
Vmn2r117	C	T	17: 23,696,814 (GRCm39)	A198T	probably damaging	Het
Vmn2r117	A	C	17: 23,698,520 (GRCm39)	S18A	probably benign	Het
Vmn2r121	T	G	X: 123,037,499 (GRCm39)	K840N	probably benign	Het
Vmn2r121	C	T	X: 123,043,413 (GRCm39)	E73K	probably benign	Het
Vmn2r121	T	A	X: 123,037,480 (GRCm39)	N847Y	possibly damaging	Het
Vmn2r125	T	A	4: 156,703,521 (GRCm39)	L300M	probably benign	Het
Vmn2r125	A	T	4: 156,703,332 (GRCm39)	T237S	probably benign	Het
Vmn2r125	C	T	4: 156,703,333 (GRCm39)	T237I	probably benign	Het
Vmn2r125	C	A	4: 156,703,194 (GRCm39)	Q191K	probably benign	Het
Vmn2r125	A	C	4: 156,703,195 (GRCm39)	Q191P	probably benign	Het
Vmn2r125	T	C	4: 156,703,261 (GRCm39)	V213A	probably benign	Het
Vmn2r125	T	C	4: 156,703,678 (GRCm39)	M352T	probably benign	Het
Vmn2r129	C	A	4: 156,690,730 (GRCm39)		noncoding transcript	Het
Vmn2r129	A	T	4: 156,690,441 (GRCm39)		noncoding transcript	Het
Vmn2r129	T	G	4: 156,690,779 (GRCm39)		noncoding transcript	Het
Vmn2r129	T	G	4: 156,686,857 (GRCm39)		noncoding transcript	Het
Vmn2r129	G	T	4: 156,686,692 (GRCm39)		noncoding transcript	Het
Vmn2r129	T	C	4: 156,686,558 (GRCm39)		noncoding transcript	Het
Vmn2r129	G	T	4: 156,690,755 (GRCm39)		noncoding transcript	Het
Vmn2r88	A	G	14: 51,650,582 (GRCm39)	I98M	probably benign	Het
Vmn2r88	C	T	14: 51,654,259 (GRCm39)	P539L	possibly damaging	Het
Vmn2r88	T	C	14: 51,650,713 (GRCm39)	I142T	probably benign	Het
Vmn2r88	T	C	14: 51,650,517 (GRCm39)	F77L	probably benign	Het
Vmn2r89	A	C	14: 51,693,428 (GRCm39)	Q259H	probably benign	Het
Vmn2r89	T	G	14: 51,694,950 (GRCm39)	L477V	probably benign	Het
Zfp180	C	T	7: 23,804,255 (GRCm39)	R225C	probably benign	Het
Zfp180	G	A	7: 23,803,841 (GRCm39)	C85Y	possibly damaging	Het
Zfp180	G	A	7: 23,804,420 (GRCm39)	V280M	possibly damaging	Het
Zfp982	G	A	4: 147,596,826 (GRCm39)	C61Y	probably benign	Het

Other mutations in Sp110

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00503:Sp110	APN	1	85,505,050 (GRCm39)	missense	probably benign
IGL00510:Sp110	APN	1	85,505,050 (GRCm39)	missense	probably benign
IGL00516:Sp110	APN	1	85,505,050 (GRCm39)	missense	probably benign
IGL03382:Sp110	APN	1	85,505,050 (GRCm39)	missense	probably benign
FR4342:Sp110	UTSW	1	85,515,209 (GRCm39)	small insertion	probably benign
FR4976:Sp110	UTSW	1	85,515,210 (GRCm39)	small insertion	probably benign
IGL03147:Sp110	UTSW	1	85,519,288 (GRCm39)	frame shift	probably null
PIT4131001:Sp110	UTSW	1	85,513,975 (GRCm39)	missense	probably benign	0.01
PIT4131001:Sp110	UTSW	1	85,513,971 (GRCm39)	missense	probably benign	0.05
PIT4142001:Sp110	UTSW	1	85,513,975 (GRCm39)	missense	probably benign	0.01
PIT4142001:Sp110	UTSW	1	85,513,971 (GRCm39)	missense	probably benign	0.05
R0472:Sp110	UTSW	1	85,516,841 (GRCm39)	missense	possibly damaging	0.79
R0483:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R0551:Sp110	UTSW	1	85,516,821 (GRCm39)	splice site	probably benign
R0638:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R0806:Sp110	UTSW	1	85,514,002 (GRCm39)	missense	possibly damaging	0.51
R0806:Sp110	UTSW	1	85,513,975 (GRCm39)	missense	probably benign	0.01
R1074:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R1079:Sp110	UTSW	1	85,516,825 (GRCm39)	splice site	probably benign
R1228:Sp110	UTSW	1	85,519,481 (GRCm39)	missense	probably benign	0.03
R1403:Sp110	UTSW	1	85,506,800 (GRCm39)	missense	probably benign	0.00
R1406:Sp110	UTSW	1	85,506,800 (GRCm39)	missense	probably benign	0.00
R1418:Sp110	UTSW	1	85,522,106 (GRCm39)	missense	probably benign	0.08
R1718:Sp110	UTSW	1	85,522,106 (GRCm39)	missense	probably benign	0.08
R1744:Sp110	UTSW	1	85,522,093 (GRCm39)	missense	probably benign	0.26
R1747:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R1806:Sp110	UTSW	1	85,523,831 (GRCm39)	critical splice acceptor site	probably null
R1957:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R2404:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R2964:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R3176:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R4190:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R4398:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R4505:Sp110	UTSW	1	85,516,894 (GRCm39)	missense	probably damaging	1.00
R4565:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R4625:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R4922:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R4986:Sp110	UTSW	1	85,519,481 (GRCm39)	missense	probably benign	0.03
R5014:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R5080:Sp110	UTSW	1	85,523,776 (GRCm39)	nonsense	probably null
R5087:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5254:Sp110	UTSW	1	85,504,923 (GRCm39)	utr 3 prime	probably benign
R5335:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5353:Sp110	UTSW	1	85,516,841 (GRCm39)	missense	possibly damaging	0.79
R5383:Sp110	UTSW	1	85,519,290 (GRCm39)	frame shift	probably null
R5387:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5389:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5398:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5443:Sp110	UTSW	1	85,516,841 (GRCm39)	missense	possibly damaging	0.79
R5447:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5729:Sp110	UTSW	1	85,516,839 (GRCm39)	missense	probably damaging	0.99
R5752:Sp110	UTSW	1	85,504,923 (GRCm39)	utr 3 prime	probably benign
R5754:Sp110	UTSW	1	85,504,923 (GRCm39)	utr 3 prime	probably benign
R5799:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R6027:Sp110	UTSW	1	85,505,039 (GRCm39)	missense	possibly damaging	0.83
R6171:Sp110	UTSW	1	85,505,050 (GRCm39)	missense	probably benign
R6367:Sp110	UTSW	1	85,522,013 (GRCm39)	missense	probably benign	0.00
R6771:Sp110	UTSW	1	85,520,000 (GRCm39)	splice site	probably null
R7097:Sp110	UTSW	1	85,507,406 (GRCm39)	missense	possibly damaging	0.80
R7519:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7520:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7594:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7596:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7598:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7600:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7601:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7602:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7640:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7641:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7674:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7691:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R7695:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
R8072:Sp110	UTSW	1	85,515,207 (GRCm39)	small insertion	probably benign
R8794:Sp110	UTSW	1	85,511,231 (GRCm39)	critical splice donor site	probably null
R9284:Sp110	UTSW	1	85,507,363 (GRCm39)	critical splice donor site	probably null
R9350:Sp110	UTSW	1	85,506,813 (GRCm39)	missense	probably benign	0.01
X0035:Sp110	UTSW	1	85,513,975 (GRCm39)	missense	probably benign	0.01

Posted On

2015-04-16