Mutagenetix > Incidental Mutation

Incidental Mutation 'R3938:Zfp955b'

307309

Institutional Source

Beutler Lab

Gene Symbol

Zfp955b

Ensembl Gene

ENSMUSG00000096910

Gene Name

zinc finger protein 955B

Synonyms

C430039G02Rik, A430003O12Rik, Gm4455

MMRRC Submission

040825-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.065) question?

Stock #

R3938 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

33508518-33526215 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 33524390 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Phenylalanine at position 59 (Y59F)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099414]

AlphaFold

L7N232

Predicted Effect

probably benign
Transcript: ENSMUST00000099414

SMART Domains

Protein: ENSMUSP00000097011
Gene: ENSMUSG00000096910

Domain	Start	End	E-Value	Type
KRAB	10	70	3.04e-14	SMART
ZnF_C2H2	230	252	7.68e0	SMART
ZnF_C2H2	258	280	5.72e-1	SMART
ZnF_C2H2	290	312	6.75e0	SMART
ZnF_C2H2	318	340	5.81e-2	SMART
ZnF_C2H2	346	368	3.16e-3	SMART
ZnF_C2H2	374	396	1.18e-2	SMART
ZnF_C2H2	402	424	7.78e-3	SMART
ZnF_C2H2	430	452	3.16e-3	SMART
ZnF_C2H2	458	480	1.1e-2	SMART
ZnF_C2H2	486	508	2.09e-3	SMART
ZnF_C2H2	514	536	6.67e-2	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000170779
AA Change: Y59F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000132420
Gene: ENSMUSG00000091515
AA Change: Y59F

Domain	Start	End	E-Value	Type
ZnF_C2H2	3	25	2.6e-5	SMART
ZnF_C2H2	31	53	1.3e-1	SMART
ZnF_C2H2	59	81	9.8e-7	SMART
ZnF_C2H2	86	108	4.1e-2	SMART
ZnF_C2H2	114	136	2.7e-6	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182230

Meta Mutation Damage Score

0.0871

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.3%
20x: 95.1%

Validation Efficiency

98% (57/58)

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamts1	C	T	16: 85,592,507 (GRCm39)	V634M	possibly damaging	Het
Arid4b	A	T	13: 14,361,513 (GRCm39)	N659I	probably benign	Het
BC049715	T	C	6: 136,817,453 (GRCm39)	I231T	possibly damaging	Het
Bmp4	T	C	14: 46,621,536 (GRCm39)	Y336C	probably damaging	Het
Ccdc30	G	A	4: 119,209,870 (GRCm39)	T293I	probably benign	Het
Chd5	A	T	4: 152,461,512 (GRCm39)	T1275S	probably benign	Het
Chtf8	A	T	8: 107,612,537 (GRCm39)	M134K	probably benign	Het
Col11a2	A	T	17: 34,258,599 (GRCm39)		probably benign	Het
Cyp8b1	A	G	9: 121,744,684 (GRCm39)	V216A	probably benign	Het
Dnah8	C	T	17: 31,073,911 (GRCm39)	T4527M	probably damaging	Het
Elavl3	A	G	9: 21,930,040 (GRCm39)	V288A	probably damaging	Het
Erap1	T	A	13: 74,816,147 (GRCm39)	L92Q	probably damaging	Het
Exoc3l	G	T	8: 106,020,037 (GRCm39)	P296H	probably damaging	Het
Fcgbpl1	C	T	7: 27,853,719 (GRCm39)	P1561L	probably damaging	Het
Foxl3	A	T	5: 138,806,723 (GRCm39)	N78Y	probably damaging	Het
Hacl1	T	C	14: 31,356,148 (GRCm39)		probably benign	Het
Hrnr	T	A	3: 93,230,162 (GRCm39)	N133K	probably benign	Het
Itgax	G	T	7: 127,735,445 (GRCm39)	R504S	possibly damaging	Het
Itgb4	A	G	11: 115,896,752 (GRCm39)	S1461G	possibly damaging	Het
Klkb1	G	T	8: 45,735,838 (GRCm39)	T175K	probably damaging	Het
Lrrk2	A	T	15: 91,596,983 (GRCm39)	D525V	possibly damaging	Het
Lrrk2	C	A	15: 91,662,707 (GRCm39)	T1912K	probably damaging	Het
Mdga1	G	T	17: 30,076,596 (GRCm39)	Q59K	probably damaging	Het
Mpp4	A	G	1: 59,163,842 (GRCm39)	V466A	possibly damaging	Het
Myh6	T	C	14: 55,200,512 (GRCm39)	D203G	probably benign	Het
Myo5b	T	C	18: 74,849,108 (GRCm39)	S1116P	probably damaging	Het
Nemp1	T	C	10: 127,531,342 (GRCm39)	L311P	probably damaging	Het
Nup205	A	G	6: 35,196,677 (GRCm39)	R1138G	probably damaging	Het
Nup54	A	G	5: 92,565,388 (GRCm39)	M443T	probably damaging	Het
Peak1	T	C	9: 56,167,649 (GRCm39)	E93G	probably benign	Het
Pirb	A	T	7: 3,720,637 (GRCm39)	L287Q	probably benign	Het
Plekhj1	A	G	10: 80,633,609 (GRCm39)	I76T	probably damaging	Het
Poll	A	G	19: 45,546,857 (GRCm39)		probably benign	Het
Ppp1r3a	A	T	6: 14,719,073 (GRCm39)	S614T	probably damaging	Het
Pygm	A	T	19: 6,442,980 (GRCm39)	I556F	probably benign	Het
Ranbp2	T	C	10: 58,312,294 (GRCm39)	F1005L	probably benign	Het
Rcor3	G	T	1: 191,785,385 (GRCm39)	T361K	possibly damaging	Het
Robo4	A	G	9: 37,313,313 (GRCm39)		probably benign	Het
Rps15	T	C	10: 80,129,673 (GRCm39)	V96A	probably benign	Het
Rrm2	T	A	12: 24,759,431 (GRCm39)	N55K	probably damaging	Het
Shank2	T	C	7: 143,682,112 (GRCm39)	Y382H	probably benign	Het
Slc25a10	G	T	11: 120,382,819 (GRCm39)	E3*	probably null	Het
Slc7a8	T	A	14: 54,973,298 (GRCm39)	E223V	probably benign	Het
Snx13	A	G	12: 35,194,096 (GRCm39)	K880E	probably benign	Het
Spinkl	T	G	18: 44,301,216 (GRCm39)	M41L	probably benign	Het
Srp54a	A	C	12: 55,136,042 (GRCm39)	N19T	probably benign	Het
Sun2	T	C	15: 79,618,356 (GRCm39)	K268E	probably benign	Het
Sytl1	G	A	4: 132,982,935 (GRCm39)	Q359*	probably null	Het
Tlr6	A	T	5: 65,110,938 (GRCm39)	F656L	probably damaging	Het
Tmem185a	C	T	X: 69,505,792 (GRCm39)		probably null	Het
Tmem45a2	C	T	16: 56,859,398 (GRCm39)	D278N	probably benign	Het
Trav7-1	T	C	14: 52,892,791 (GRCm39)		probably benign	Het
Trpc2	T	A	7: 101,742,781 (GRCm39)	M597K	probably damaging	Het
Ttc21a	A	G	9: 119,779,882 (GRCm39)		probably benign	Het
Usp9y	C	T	Y: 1,313,741 (GRCm39)	M2188I	probably damaging	Het
Utrn	C	A	10: 12,625,774 (GRCm39)		probably null	Het
Vmn1r35	T	A	6: 66,656,057 (GRCm39)	R204S	probably damaging	Het

Other mutations in Zfp955b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00537:Zfp955b	APN	17	33,521,847 (GRCm39)	missense	probably damaging	1.00
IGL02073:Zfp955b	APN	17	33,519,564 (GRCm39)	missense	possibly damaging	0.69
IGL02126:Zfp955b	APN	17	33,521,238 (GRCm39)	nonsense	probably null
IGL02237:Zfp955b	APN	17	33,520,893 (GRCm39)	missense	probably damaging	1.00
IGL02587:Zfp955b	APN	17	33,519,624 (GRCm39)	missense	probably damaging	1.00
IGL02971:Zfp955b	APN	17	33,519,940 (GRCm39)	missense	probably benign	0.11
IGL03034:Zfp955b	APN	17	33,521,142 (GRCm39)	missense	probably benign	0.22
IGL03493:Zfp955b	APN	17	33,521,519 (GRCm39)	missense	probably benign	0.35
R0269:Zfp955b	UTSW	17	33,524,437 (GRCm39)	missense	probably damaging	1.00
R0373:Zfp955b	UTSW	17	33,521,496 (GRCm39)	missense	probably benign
R0617:Zfp955b	UTSW	17	33,524,437 (GRCm39)	missense	probably damaging	1.00
R0684:Zfp955b	UTSW	17	33,521,947 (GRCm39)	missense	probably benign	0.00
R1778:Zfp955b	UTSW	17	33,521,788 (GRCm39)	missense	probably benign	0.07
R1874:Zfp955b	UTSW	17	33,524,427 (GRCm39)	missense	probably benign	0.10
R3893:Zfp955b	UTSW	17	33,521,968 (GRCm39)	missense	probably benign	0.01
R4082:Zfp955b	UTSW	17	33,521,129 (GRCm39)	missense	probably benign	0.08
R4672:Zfp955b	UTSW	17	33,524,233 (GRCm39)	unclassified	probably benign
R4956:Zfp955b	UTSW	17	33,524,209 (GRCm39)	unclassified	probably benign
R4998:Zfp955b	UTSW	17	33,524,125 (GRCm39)	unclassified	probably benign
R5276:Zfp955b	UTSW	17	33,522,031 (GRCm39)	missense	probably damaging	1.00
R5341:Zfp955b	UTSW	17	33,524,095 (GRCm39)	unclassified	probably benign
R5558:Zfp955b	UTSW	17	33,521,161 (GRCm39)	missense	possibly damaging	0.88
R6086:Zfp955b	UTSW	17	33,521,478 (GRCm39)	missense	probably benign
R6170:Zfp955b	UTSW	17	33,521,084 (GRCm39)	missense	probably benign	0.00
R6306:Zfp955b	UTSW	17	33,522,160 (GRCm39)	missense	probably benign	0.07
R6519:Zfp955b	UTSW	17	33,521,051 (GRCm39)	missense	possibly damaging	0.55
R9286:Zfp955b	UTSW	17	33,521,683 (GRCm39)	missense	probably benign	0.04

Predicted Primers

PCR Primer
(F):5'- ACCTTCATGTGCTGCCTCAG -3'
(R):5'- CTTACAAGTGTGCTAAATGCTCC -3'

Sequencing Primer
(F):5'- TGGCTGAAGCACTTGTCACAC -3'
(R):5'- TGCTCCAAGAGTTTCAGTCAGAGC -3'

Posted On

2015-04-17