Incidental Mutation 'R3879:Or5b121'
| ID |
308698 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5b121
|
| Ensembl Gene |
ENSMUSG00000095484 |
| Gene Name |
olfactory receptor family 5 subfamily B member 121 |
| Synonyms |
GA_x6K02T2RE5P-3862389-3863336, MOR202-44, Olfr1480 |
| MMRRC Submission |
040793-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.058)
|
| Stock # |
R3879 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
19 |
| Chromosomal Location |
13507039-13507986 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 13507613 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Cysteine
at position 236
(Y236C)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000146931
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000072219]
[ENSMUST00000207093]
[ENSMUST00000207904]
[ENSMUST00000207987]
|
| AlphaFold |
A0A140LIR8 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000072219
AA Change: Y192C
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000072076
Gene: ENSMUSG00000095484
AA Change: Y192C
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
306 |
8.2e-54 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
34 |
304 |
1.6e-6 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
4.5e-19 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000207093
AA Change: Y192C
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000207904
AA Change: Y192C
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000207987
AA Change: Y236C
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216709
|
| Meta Mutation Damage Score |
0.6467 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.4%
- 20x: 95.5%
|
| Validation Efficiency |
95% (38/40) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4933434E20Rik |
T |
C |
3: 89,970,561 (GRCm39) |
|
probably benign |
Het |
| Aass |
G |
A |
6: 23,122,520 (GRCm39) |
H68Y |
probably damaging |
Het |
| Abcc8 |
T |
A |
7: 45,754,051 (GRCm39) |
K1588N |
possibly damaging |
Het |
| Calcoco1 |
T |
C |
15: 102,615,823 (GRCm39) |
D601G |
probably damaging |
Het |
| Ccdc175 |
C |
A |
12: 72,182,792 (GRCm39) |
R409I |
probably damaging |
Het |
| Ccnl1 |
A |
G |
3: 65,856,179 (GRCm39) |
V242A |
possibly damaging |
Het |
| Clasp2 |
T |
C |
9: 113,719,029 (GRCm39) |
F705L |
probably damaging |
Het |
| Cyp46a1 |
A |
G |
12: 108,324,389 (GRCm39) |
T389A |
probably benign |
Het |
| Eps8 |
A |
G |
6: 137,504,360 (GRCm39) |
|
probably benign |
Het |
| Gm9894 |
T |
C |
13: 67,912,916 (GRCm39) |
|
noncoding transcript |
Het |
| Kcnd3 |
C |
T |
3: 105,566,082 (GRCm39) |
A421V |
probably damaging |
Het |
| Nup153 |
A |
T |
13: 46,837,436 (GRCm39) |
V1262E |
probably damaging |
Het |
| Nup210l |
A |
G |
3: 90,092,780 (GRCm39) |
T1245A |
probably damaging |
Het |
| Or10ad1b |
C |
T |
15: 98,125,085 (GRCm39) |
C147Y |
probably damaging |
Het |
| Pcif1 |
G |
A |
2: 164,727,878 (GRCm39) |
G189D |
probably benign |
Het |
| Pdzd2 |
A |
G |
15: 12,375,594 (GRCm39) |
S1514P |
probably damaging |
Het |
| Pigu |
A |
T |
2: 155,141,063 (GRCm39) |
F276I |
probably damaging |
Het |
| Pramex1 |
T |
C |
X: 134,514,194 (GRCm39) |
H365R |
probably benign |
Het |
| Psmd9 |
C |
T |
5: 123,372,653 (GRCm39) |
|
probably benign |
Het |
| Rasgrp2 |
A |
T |
19: 6,463,920 (GRCm39) |
Q539H |
probably benign |
Het |
| Rgs22 |
T |
G |
15: 36,107,051 (GRCm39) |
I112L |
possibly damaging |
Het |
| Slc26a9 |
A |
T |
1: 131,696,969 (GRCm39) |
T786S |
probably benign |
Het |
| Sned1 |
A |
G |
1: 93,192,752 (GRCm39) |
|
probably benign |
Het |
| St7l |
G |
A |
3: 104,833,763 (GRCm39) |
V475I |
probably damaging |
Het |
| Tnfrsf11a |
C |
T |
1: 105,737,085 (GRCm39) |
T64I |
probably damaging |
Het |
| Top3a |
A |
G |
11: 60,634,765 (GRCm39) |
V713A |
possibly damaging |
Het |
| Trim16 |
G |
A |
11: 62,731,433 (GRCm39) |
G348S |
probably damaging |
Het |
| Tshz3 |
C |
T |
7: 36,470,962 (GRCm39) |
Q984* |
probably null |
Het |
| Ttn |
A |
G |
2: 76,566,406 (GRCm39) |
|
probably null |
Het |
| Ubfd1 |
T |
A |
7: 121,667,999 (GRCm39) |
|
probably benign |
Het |
| Zfp37 |
A |
T |
4: 62,109,572 (GRCm39) |
Y497* |
probably null |
Het |
| Zfp462 |
G |
A |
4: 55,060,095 (GRCm39) |
C1207Y |
probably damaging |
Het |
| Zfp607b |
A |
G |
7: 27,403,476 (GRCm39) |
E644G |
possibly damaging |
Het |
|
| Other mutations in Or5b121 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00264:Or5b121
|
APN |
19 |
13,507,214 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01446:Or5b121
|
APN |
19 |
13,507,616 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02300:Or5b121
|
APN |
19 |
13,507,244 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02689:Or5b121
|
APN |
19 |
13,507,171 (GRCm39) |
missense |
probably benign |
0.34 |
|
IGL03119:Or5b121
|
APN |
19 |
13,507,799 (GRCm39) |
missense |
probably benign |
0.11 |
|
R0636:Or5b121
|
UTSW |
19 |
13,507,613 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R1665:Or5b121
|
UTSW |
19 |
13,507,202 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1708:Or5b121
|
UTSW |
19 |
13,507,277 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2100:Or5b121
|
UTSW |
19 |
13,507,798 (GRCm39) |
missense |
probably benign |
0.02 |
|
R2137:Or5b121
|
UTSW |
19 |
13,507,802 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R3949:Or5b121
|
UTSW |
19 |
13,507,384 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4780:Or5b121
|
UTSW |
19 |
13,507,319 (GRCm39) |
missense |
probably benign |
0.30 |
|
R4953:Or5b121
|
UTSW |
19 |
13,507,178 (GRCm39) |
missense |
probably null |
1.00 |
|
R5075:Or5b121
|
UTSW |
19 |
13,507,637 (GRCm39) |
missense |
probably benign |
0.17 |
|
R5133:Or5b121
|
UTSW |
19 |
13,507,442 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5656:Or5b121
|
UTSW |
19 |
13,507,744 (GRCm39) |
missense |
probably benign |
|
|
R6853:Or5b121
|
UTSW |
19 |
13,507,295 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R6890:Or5b121
|
UTSW |
19 |
13,507,445 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7481:Or5b121
|
UTSW |
19 |
13,507,817 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7663:Or5b121
|
UTSW |
19 |
13,507,809 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8869:Or5b121
|
UTSW |
19 |
13,507,892 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9425:Or5b121
|
UTSW |
19 |
13,507,222 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9531:Or5b121
|
UTSW |
19 |
13,507,936 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9571:Or5b121
|
UTSW |
19 |
13,507,697 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1088:Or5b121
|
UTSW |
19 |
13,507,216 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
Z1177:Or5b121
|
UTSW |
19 |
13,507,579 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- ACCGTTATGCAGCAGTGTG -3'
(R):5'- GTCCATGGAGTGATTGGAGC -3'
Sequencing Primer
(F):5'- GCAGTGTGCAAACCCTTG -3'
(R):5'- GCTGGGTTGTAAGTACATGAAG -3'
|
| Posted On |
2015-04-17 |
Incidental Mutation