Incidental Mutation 'R3972:Zfp979'
ID |
311012 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Zfp979
|
Ensembl Gene |
ENSMUSG00000066000 |
Gene Name |
zinc finger protein 979 |
Synonyms |
Ssm1, 2610305D13Rik |
MMRRC Submission |
040840-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.226)
|
Stock # |
R3972 (G1)
|
Quality Score |
196 |
Status
|
Not validated
|
Chromosome |
4 |
Chromosomal Location |
147696394-147726970 bp(-) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
G to A
at 147702876 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Stop codon
at position 25
(Q25*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000114677
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000037565]
[ENSMUST00000105720]
[ENSMUST00000133006]
|
AlphaFold |
A2A799 |
Predicted Effect |
probably null
Transcript: ENSMUST00000037565
AA Change: Q25*
|
SMART Domains |
Protein: ENSMUSP00000038153 Gene: ENSMUSG00000066000 AA Change: Q25*
Domain | Start | End | E-Value | Type |
KRAB
|
28 |
88 |
2.06e-16 |
SMART |
ZnF_C2H2
|
257 |
279 |
2.06e1 |
SMART |
ZnF_C2H2
|
285 |
307 |
2.53e-2 |
SMART |
ZnF_C2H2
|
313 |
335 |
1.95e-3 |
SMART |
ZnF_C2H2
|
341 |
363 |
1.4e1 |
SMART |
ZnF_C2H2
|
369 |
391 |
9.08e-4 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000105720
AA Change: Q25*
|
SMART Domains |
Protein: ENSMUSP00000101345 Gene: ENSMUSG00000066000 AA Change: Q25*
Domain | Start | End | E-Value | Type |
KRAB
|
28 |
88 |
2.06e-16 |
SMART |
ZnF_C2H2
|
257 |
279 |
2.06e1 |
SMART |
ZnF_C2H2
|
285 |
307 |
2.53e-2 |
SMART |
ZnF_C2H2
|
313 |
335 |
1.95e-3 |
SMART |
ZnF_C2H2
|
341 |
363 |
1.4e1 |
SMART |
ZnF_C2H2
|
369 |
391 |
9.08e-4 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000133006
AA Change: Q25*
|
SMART Domains |
Protein: ENSMUSP00000114677 Gene: ENSMUSG00000066000 AA Change: Q25*
Domain | Start | End | E-Value | Type |
KRAB
|
28 |
88 |
2.06e-16 |
SMART |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 97.0%
- 20x: 94.1%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 40 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Alk |
T |
G |
17: 72,292,442 (GRCm39) |
D512A |
probably benign |
Het |
Avl9 |
T |
C |
6: 56,720,393 (GRCm39) |
F477S |
probably damaging |
Het |
C7 |
C |
T |
15: 5,037,133 (GRCm39) |
V582I |
possibly damaging |
Het |
Cldn20 |
A |
G |
17: 3,582,914 (GRCm39) |
N29S |
probably benign |
Het |
Coro2b |
C |
T |
9: 62,336,522 (GRCm39) |
A251T |
possibly damaging |
Het |
Dnah3 |
T |
A |
7: 119,685,943 (GRCm39) |
D131V |
probably damaging |
Het |
Dusp12 |
T |
C |
1: 170,707,344 (GRCm39) |
K248R |
probably damaging |
Het |
Fat3 |
G |
A |
9: 15,909,567 (GRCm39) |
S2145F |
probably damaging |
Het |
Fgf1 |
T |
C |
18: 38,980,147 (GRCm39) |
T76A |
probably benign |
Het |
Gucy2c |
C |
T |
6: 136,685,364 (GRCm39) |
R859K |
probably damaging |
Het |
Irf2bp1 |
T |
A |
7: 18,739,369 (GRCm39) |
D336E |
possibly damaging |
Het |
Lpar6 |
A |
G |
14: 73,476,513 (GRCm39) |
H158R |
probably benign |
Het |
Ltbp3 |
G |
A |
19: 5,804,050 (GRCm39) |
R854Q |
probably benign |
Het |
Lyst |
T |
C |
13: 13,881,210 (GRCm39) |
C2814R |
possibly damaging |
Het |
Man2b1 |
A |
G |
8: 85,812,020 (GRCm39) |
N158S |
probably damaging |
Het |
Mki67 |
A |
C |
7: 135,297,859 (GRCm39) |
S2392A |
probably benign |
Het |
Mrpl16 |
A |
G |
19: 11,750,239 (GRCm39) |
N41S |
probably benign |
Het |
Myo5b |
C |
T |
18: 74,873,598 (GRCm39) |
L1501F |
probably damaging |
Het |
Nudt9 |
G |
T |
5: 104,194,991 (GRCm39) |
C29F |
probably benign |
Het |
Or4d11 |
G |
T |
19: 12,013,383 (GRCm39) |
T241N |
probably damaging |
Het |
Otop1 |
A |
G |
5: 38,457,533 (GRCm39) |
I431V |
probably benign |
Het |
Otp |
T |
G |
13: 95,019,692 (GRCm39) |
L181R |
probably damaging |
Het |
Pde4a |
A |
G |
9: 21,117,513 (GRCm39) |
T592A |
probably damaging |
Het |
Pi4ka |
A |
G |
16: 17,111,739 (GRCm39) |
Y1579H |
probably damaging |
Het |
Rb1cc1 |
T |
C |
1: 6,319,224 (GRCm39) |
V864A |
probably benign |
Het |
Reln |
A |
T |
5: 22,183,999 (GRCm39) |
F1667I |
probably damaging |
Het |
Serpinb10 |
T |
A |
1: 107,463,852 (GRCm39) |
F45I |
probably damaging |
Het |
Setdb1 |
A |
T |
3: 95,248,649 (GRCm39) |
N422K |
probably damaging |
Het |
Slc17a7 |
A |
G |
7: 44,819,334 (GRCm39) |
I137V |
possibly damaging |
Het |
Tet1 |
T |
A |
10: 62,649,505 (GRCm39) |
E67D |
probably damaging |
Het |
Tpcn1 |
C |
A |
5: 120,691,817 (GRCm39) |
|
probably null |
Het |
Trav9-4 |
T |
C |
14: 53,913,877 (GRCm39) |
Y44H |
possibly damaging |
Het |
Trmt1l |
A |
G |
1: 151,309,634 (GRCm39) |
N106D |
possibly damaging |
Het |
Ttll12 |
A |
T |
15: 83,466,297 (GRCm39) |
L388Q |
probably damaging |
Het |
Ttn |
A |
T |
2: 76,641,587 (GRCm39) |
L5176Q |
possibly damaging |
Het |
Ubfd1 |
T |
G |
7: 121,666,656 (GRCm39) |
S51A |
probably benign |
Het |
Uckl1 |
T |
C |
2: 181,216,256 (GRCm39) |
D148G |
probably damaging |
Het |
Usp34 |
T |
C |
11: 23,407,803 (GRCm39) |
L2571S |
probably damaging |
Het |
Wdr75 |
T |
C |
1: 45,861,714 (GRCm39) |
V718A |
probably benign |
Het |
Zfp266 |
A |
G |
9: 20,411,446 (GRCm39) |
S244P |
probably damaging |
Het |
|
Other mutations in Zfp979 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01285:Zfp979
|
APN |
4 |
147,699,853 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL01865:Zfp979
|
APN |
4 |
147,699,774 (GRCm39) |
missense |
probably benign |
0.03 |
IGL02336:Zfp979
|
APN |
4 |
147,699,808 (GRCm39) |
missense |
probably damaging |
1.00 |
R0336:Zfp979
|
UTSW |
4 |
147,697,592 (GRCm39) |
missense |
possibly damaging |
0.86 |
R1365:Zfp979
|
UTSW |
4 |
147,697,681 (GRCm39) |
missense |
probably benign |
0.00 |
R1440:Zfp979
|
UTSW |
4 |
147,698,493 (GRCm39) |
missense |
possibly damaging |
0.96 |
R1714:Zfp979
|
UTSW |
4 |
147,698,442 (GRCm39) |
missense |
probably damaging |
1.00 |
R1796:Zfp979
|
UTSW |
4 |
147,697,740 (GRCm39) |
missense |
probably damaging |
0.99 |
R2155:Zfp979
|
UTSW |
4 |
147,697,915 (GRCm39) |
missense |
possibly damaging |
0.86 |
R3735:Zfp979
|
UTSW |
4 |
147,697,939 (GRCm39) |
missense |
possibly damaging |
0.93 |
R3963:Zfp979
|
UTSW |
4 |
147,697,588 (GRCm39) |
missense |
probably benign |
0.34 |
R4471:Zfp979
|
UTSW |
4 |
147,697,913 (GRCm39) |
nonsense |
probably null |
|
R4983:Zfp979
|
UTSW |
4 |
147,698,371 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5310:Zfp979
|
UTSW |
4 |
147,698,375 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5805:Zfp979
|
UTSW |
4 |
147,698,067 (GRCm39) |
missense |
probably damaging |
0.99 |
R5861:Zfp979
|
UTSW |
4 |
147,697,966 (GRCm39) |
nonsense |
probably null |
|
R6598:Zfp979
|
UTSW |
4 |
147,698,223 (GRCm39) |
missense |
probably damaging |
0.99 |
R6599:Zfp979
|
UTSW |
4 |
147,698,083 (GRCm39) |
missense |
probably benign |
0.40 |
R6925:Zfp979
|
UTSW |
4 |
147,697,999 (GRCm39) |
missense |
possibly damaging |
0.86 |
R7684:Zfp979
|
UTSW |
4 |
147,697,799 (GRCm39) |
missense |
probably damaging |
0.99 |
R7801:Zfp979
|
UTSW |
4 |
147,698,435 (GRCm39) |
missense |
probably damaging |
0.96 |
R8035:Zfp979
|
UTSW |
4 |
147,697,763 (GRCm39) |
missense |
probably damaging |
1.00 |
R8086:Zfp979
|
UTSW |
4 |
147,698,004 (GRCm39) |
missense |
probably damaging |
0.99 |
R8244:Zfp979
|
UTSW |
4 |
147,697,933 (GRCm39) |
missense |
possibly damaging |
0.92 |
R8369:Zfp979
|
UTSW |
4 |
147,697,548 (GRCm39) |
missense |
possibly damaging |
0.73 |
R8880:Zfp979
|
UTSW |
4 |
147,697,836 (GRCm39) |
missense |
probably benign |
0.00 |
R8887:Zfp979
|
UTSW |
4 |
147,698,219 (GRCm39) |
missense |
probably damaging |
0.96 |
R8988:Zfp979
|
UTSW |
4 |
147,697,984 (GRCm39) |
missense |
probably benign |
|
R9016:Zfp979
|
UTSW |
4 |
147,697,504 (GRCm39) |
missense |
possibly damaging |
0.68 |
R9356:Zfp979
|
UTSW |
4 |
147,698,358 (GRCm39) |
missense |
probably damaging |
0.96 |
|
Predicted Primers |
PCR Primer
(F):5'- AAAGCTATGGTATACGTGAGAAACC -3'
(R):5'- GTCAAAATGTATCAGTGCATGCC -3'
Sequencing Primer
(F):5'- TGGTATACGTGAGAAACCAAATTG -3'
(R):5'- CCCTCATGTCGGTAGAAACATTGG -3'
|
Posted On |
2015-04-29 |