Incidental Mutation 'R4026:Vmn1r34'
ID |
312982 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r34
|
Ensembl Gene |
ENSMUSG00000091012 |
Gene Name |
vomeronasal 1 receptor 34 |
Synonyms |
Gm5991 |
MMRRC Submission |
040849-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.073)
|
Stock # |
R4026 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
6 |
Chromosomal Location |
66613807-66614736 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 66614688 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Leucine
at position 17
(M17L)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000153720
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000074381]
[ENSMUST00000226262]
[ENSMUST00000226910]
[ENSMUST00000226999]
[ENSMUST00000227332]
[ENSMUST00000228498]
[ENSMUST00000228647]
|
AlphaFold |
G3XA52 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000074381
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000132900 Gene: ENSMUSG00000091012 AA Change: M17L
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
28 |
293 |
2.2e-54 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226262
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226910
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226999
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000227332
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228498
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228647
AA Change: M17L
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.7%
- 20x: 93.1%
|
Validation Efficiency |
97% (36/37) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 32 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgrg7 |
A |
T |
16: 56,550,661 (GRCm39) |
Y684N |
probably damaging |
Het |
Ahnak |
G |
T |
19: 8,988,663 (GRCm39) |
V3316F |
probably damaging |
Het |
Cacna1a |
C |
T |
8: 85,307,962 (GRCm39) |
T1409I |
probably damaging |
Het |
Ccdc158 |
A |
G |
5: 92,791,666 (GRCm39) |
M698T |
probably benign |
Het |
Ces2g |
T |
A |
8: 105,691,377 (GRCm39) |
V171E |
probably damaging |
Het |
Ctnna2 |
A |
T |
6: 77,613,827 (GRCm39) |
D254E |
possibly damaging |
Het |
Dlec1 |
T |
C |
9: 118,966,408 (GRCm39) |
Y1126H |
probably damaging |
Het |
Dspp |
G |
A |
5: 104,325,563 (GRCm39) |
S642N |
unknown |
Het |
Fezf2 |
A |
T |
14: 12,343,986 (GRCm38) |
C302S |
probably damaging |
Het |
Gm10754 |
A |
G |
10: 97,517,978 (GRCm39) |
|
probably benign |
Het |
Gm5581 |
G |
A |
6: 131,144,031 (GRCm39) |
|
noncoding transcript |
Het |
Gm7929 |
T |
C |
14: 41,472,509 (GRCm39) |
K21E |
probably damaging |
Het |
Hmcn1 |
A |
T |
1: 150,598,120 (GRCm39) |
D1727E |
probably benign |
Het |
Lrriq4 |
T |
C |
3: 30,704,422 (GRCm39) |
V150A |
possibly damaging |
Het |
Micu3 |
A |
G |
8: 40,812,496 (GRCm39) |
|
probably benign |
Het |
Mrpl3 |
T |
C |
9: 104,948,685 (GRCm39) |
|
probably null |
Het |
Myo1e |
A |
G |
9: 70,232,157 (GRCm39) |
I229V |
probably benign |
Het |
Ncam1 |
T |
C |
9: 49,476,295 (GRCm39) |
I265V |
probably benign |
Het |
Ncoa7 |
T |
C |
10: 30,598,720 (GRCm39) |
T68A |
probably benign |
Het |
Oprk1 |
T |
C |
1: 5,668,908 (GRCm39) |
V118A |
probably benign |
Het |
Ppp3r1 |
T |
C |
11: 17,144,786 (GRCm39) |
V133A |
probably damaging |
Het |
Sidt1 |
A |
G |
16: 44,102,249 (GRCm39) |
S304P |
possibly damaging |
Het |
Srsf6 |
T |
A |
2: 162,776,211 (GRCm39) |
|
probably benign |
Het |
Tas2r105 |
A |
G |
6: 131,663,789 (GRCm39) |
V213A |
probably benign |
Het |
Tlr12 |
C |
T |
4: 128,510,301 (GRCm39) |
E650K |
probably benign |
Het |
Top2b |
T |
G |
14: 16,409,189 (GRCm38) |
I777M |
probably damaging |
Het |
Trav4-2 |
T |
A |
14: 53,656,287 (GRCm39) |
D96E |
possibly damaging |
Het |
Vmn2r6 |
A |
T |
3: 64,445,671 (GRCm39) |
S685T |
possibly damaging |
Het |
Vmn2r89 |
T |
C |
14: 51,689,500 (GRCm39) |
M1T |
probably null |
Het |
Wdr20 |
A |
G |
12: 110,759,950 (GRCm39) |
T279A |
probably benign |
Het |
Zfp407 |
A |
G |
18: 84,577,721 (GRCm39) |
S1131P |
possibly damaging |
Het |
Zfyve1 |
A |
G |
12: 83,641,296 (GRCm39) |
V120A |
probably benign |
Het |
|
Other mutations in Vmn1r34 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00974:Vmn1r34
|
APN |
6 |
66,614,639 (GRCm39) |
missense |
possibly damaging |
0.64 |
IGL01322:Vmn1r34
|
APN |
6 |
66,613,899 (GRCm39) |
nonsense |
probably null |
|
IGL01866:Vmn1r34
|
APN |
6 |
66,614,373 (GRCm39) |
missense |
probably benign |
0.03 |
IGL02389:Vmn1r34
|
APN |
6 |
66,614,042 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03356:Vmn1r34
|
APN |
6 |
66,613,970 (GRCm39) |
missense |
probably benign |
0.00 |
R0508:Vmn1r34
|
UTSW |
6 |
66,614,392 (GRCm39) |
missense |
probably benign |
0.19 |
R0601:Vmn1r34
|
UTSW |
6 |
66,614,648 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1381:Vmn1r34
|
UTSW |
6 |
66,613,922 (GRCm39) |
missense |
probably damaging |
1.00 |
R1605:Vmn1r34
|
UTSW |
6 |
66,613,932 (GRCm39) |
missense |
probably benign |
0.01 |
R1765:Vmn1r34
|
UTSW |
6 |
66,614,480 (GRCm39) |
missense |
probably damaging |
0.99 |
R2022:Vmn1r34
|
UTSW |
6 |
66,614,385 (GRCm39) |
missense |
possibly damaging |
0.90 |
R3878:Vmn1r34
|
UTSW |
6 |
66,614,552 (GRCm39) |
missense |
possibly damaging |
0.82 |
R4023:Vmn1r34
|
UTSW |
6 |
66,614,688 (GRCm39) |
missense |
probably benign |
|
R4024:Vmn1r34
|
UTSW |
6 |
66,614,688 (GRCm39) |
missense |
probably benign |
|
R4025:Vmn1r34
|
UTSW |
6 |
66,614,688 (GRCm39) |
missense |
probably benign |
|
R4385:Vmn1r34
|
UTSW |
6 |
66,614,123 (GRCm39) |
missense |
probably damaging |
0.99 |
R5274:Vmn1r34
|
UTSW |
6 |
66,614,123 (GRCm39) |
missense |
probably damaging |
1.00 |
R6182:Vmn1r34
|
UTSW |
6 |
66,614,312 (GRCm39) |
missense |
probably damaging |
0.97 |
R6629:Vmn1r34
|
UTSW |
6 |
66,614,499 (GRCm39) |
missense |
probably benign |
0.00 |
R7143:Vmn1r34
|
UTSW |
6 |
66,614,648 (GRCm39) |
missense |
probably benign |
0.12 |
R7689:Vmn1r34
|
UTSW |
6 |
66,613,994 (GRCm39) |
nonsense |
probably null |
|
R7956:Vmn1r34
|
UTSW |
6 |
66,614,777 (GRCm39) |
start gained |
probably benign |
|
R8031:Vmn1r34
|
UTSW |
6 |
66,614,165 (GRCm39) |
missense |
probably damaging |
1.00 |
R9570:Vmn1r34
|
UTSW |
6 |
66,614,718 (GRCm39) |
missense |
probably benign |
0.00 |
X0066:Vmn1r34
|
UTSW |
6 |
66,614,459 (GRCm39) |
missense |
probably benign |
0.02 |
Z1176:Vmn1r34
|
UTSW |
6 |
66,614,109 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- AGTCATTGACAATGTTCAATGACCC -3'
(R):5'- GGCTCAGATGTAATACAGGCACAC -3'
Sequencing Primer
(F):5'- TGACCCAAGTAAATCTGTAAGCC -3'
(R):5'- GCTAATCGATGCCTCAATGTAGG -3'
|
Posted On |
2015-04-30 |