Incidental Mutation 'R4058:Or5m8'
| ID |
314321 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5m8
|
| Ensembl Gene |
ENSMUSG00000043267 |
| Gene Name |
olfactory receptor family 5 subfamily M member 8 |
| Synonyms |
GA_x6K02T2Q125-47470765-47471775, Olfr1031, MOR200-1 |
| MMRRC Submission |
040969-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.084)
|
| Stock # |
R4058 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
85822163-85823173 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 85822576 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Arginine
at position 138
(S138R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149225
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000050942]
[ENSMUST00000056849]
[ENSMUST00000216807]
|
| AlphaFold |
Q7TR87 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000050942
AA Change: S138R
PolyPhen 2
Score 0.872 (Sensitivity: 0.83; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000059256
Gene: ENSMUSG00000043267
AA Change: S138R
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
307 |
1.1e-55 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
6.6e-23 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000056849
|
| SMART Domains |
Protein: ENSMUSP00000053309
Gene: ENSMUSG00000044923
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
37 |
314 |
2.4e-58 |
PFAM |
|
Pfam:7tm_1
|
47 |
296 |
3.2e-27 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000216807
AA Change: S138R
PolyPhen 2
Score 0.872 (Sensitivity: 0.83; Specificity: 0.93)
|
| Meta Mutation Damage Score |
0.1795 |
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 97.2%
- 20x: 94.8%
|
| Validation Efficiency |
88% (38/43) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930453N24Rik |
A |
G |
16: 64,586,821 (GRCm39) |
V301A |
probably benign |
Het |
| Adam15 |
A |
G |
3: 89,254,362 (GRCm39) |
V145A |
possibly damaging |
Het |
| Anxa4 |
C |
T |
6: 86,734,800 (GRCm39) |
|
probably null |
Het |
| Aqp9 |
C |
A |
9: 71,037,726 (GRCm39) |
V184L |
probably benign |
Het |
| Atp13a3 |
C |
A |
16: 30,173,064 (GRCm39) |
C271F |
possibly damaging |
Het |
| B4galt3 |
C |
A |
1: 171,101,613 (GRCm39) |
H196N |
probably damaging |
Het |
| Cldn34c4 |
C |
A |
X: 126,629,060 (GRCm39) |
V137F |
probably benign |
Het |
| Cngb1 |
T |
C |
8: 95,994,282 (GRCm39) |
E163G |
probably benign |
Het |
| Dync1i1 |
A |
G |
6: 5,769,764 (GRCm39) |
D113G |
probably damaging |
Het |
| Etl4 |
T |
A |
2: 20,810,830 (GRCm39) |
V971D |
possibly damaging |
Het |
| Gys1 |
A |
G |
7: 45,097,810 (GRCm39) |
|
probably benign |
Het |
| H13 |
C |
G |
2: 152,533,794 (GRCm39) |
P227R |
probably damaging |
Het |
| Ift22 |
C |
A |
5: 136,940,717 (GRCm39) |
P84Q |
unknown |
Het |
| Igfn1 |
A |
G |
1: 135,897,494 (GRCm39) |
V1024A |
probably benign |
Het |
| Kdm8 |
T |
A |
7: 125,055,666 (GRCm39) |
Y65N |
probably damaging |
Het |
| Lbp |
T |
A |
2: 158,166,550 (GRCm39) |
V368E |
probably damaging |
Het |
| Lmo2 |
T |
C |
2: 103,811,407 (GRCm39) |
Y147H |
probably damaging |
Het |
| Megf6 |
T |
C |
4: 154,326,989 (GRCm39) |
|
probably benign |
Het |
| Mettl13 |
G |
T |
1: 162,373,755 (GRCm39) |
H165Q |
probably damaging |
Het |
| Mitd1 |
C |
T |
1: 37,920,107 (GRCm39) |
S167N |
probably benign |
Het |
| Mon2 |
A |
G |
10: 122,838,724 (GRCm39) |
V1593A |
probably benign |
Het |
| Nkx3-2 |
T |
A |
5: 41,919,406 (GRCm39) |
E194V |
possibly damaging |
Het |
| Nup210 |
A |
T |
6: 91,037,602 (GRCm39) |
V757D |
probably benign |
Het |
| Opcml |
A |
G |
9: 28,812,884 (GRCm39) |
Y192C |
probably damaging |
Het |
| Or10ak7 |
T |
C |
4: 118,791,880 (GRCm39) |
D53G |
probably damaging |
Het |
| Pcdha2 |
A |
G |
18: 37,072,935 (GRCm39) |
S189G |
probably benign |
Het |
| Pkd2l2 |
T |
C |
18: 34,561,245 (GRCm39) |
F418L |
probably benign |
Het |
| Plekhg1 |
A |
G |
10: 3,907,087 (GRCm39) |
D668G |
probably damaging |
Het |
| Prep |
G |
A |
10: 45,034,467 (GRCm39) |
V660M |
probably benign |
Het |
| Qrfprl |
T |
A |
6: 65,358,525 (GRCm39) |
I83N |
probably damaging |
Het |
| Rgs8 |
A |
G |
1: 153,566,742 (GRCm39) |
T98A |
probably null |
Het |
| Rhbdd1 |
A |
G |
1: 82,348,102 (GRCm39) |
N235D |
possibly damaging |
Het |
| Rin2 |
C |
T |
2: 145,702,366 (GRCm39) |
T354I |
probably benign |
Het |
| Sgo2b |
A |
T |
8: 64,379,981 (GRCm39) |
D950E |
probably damaging |
Het |
| Slc1a5 |
T |
C |
7: 16,529,778 (GRCm39) |
V399A |
probably damaging |
Het |
| Spag16 |
A |
T |
1: 69,892,487 (GRCm39) |
Q89H |
probably damaging |
Het |
| Spta1 |
T |
C |
1: 174,068,703 (GRCm39) |
W2168R |
probably damaging |
Het |
| Taok1 |
T |
A |
11: 77,440,264 (GRCm39) |
K581M |
probably benign |
Het |
| Tns3 |
T |
C |
11: 8,442,275 (GRCm39) |
D696G |
probably damaging |
Het |
| Tspan8 |
C |
T |
10: 115,671,187 (GRCm39) |
R115* |
probably null |
Het |
| Txnrd1 |
A |
G |
10: 82,721,114 (GRCm39) |
E510G |
probably benign |
Het |
| Usp45 |
T |
C |
4: 21,810,746 (GRCm39) |
I314T |
probably damaging |
Het |
| Vmn2r15 |
T |
A |
5: 109,441,312 (GRCm39) |
H182L |
probably damaging |
Het |
| Vmn2r76 |
A |
C |
7: 85,879,508 (GRCm39) |
M264R |
probably benign |
Het |
|
| Other mutations in Or5m8 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02104:Or5m8
|
APN |
2 |
85,822,730 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02475:Or5m8
|
APN |
2 |
85,822,376 (GRCm39) |
missense |
probably benign |
0.19 |
|
IGL03230:Or5m8
|
APN |
2 |
85,822,583 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03405:Or5m8
|
APN |
2 |
85,822,230 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
PIT4151001:Or5m8
|
UTSW |
2 |
85,822,538 (GRCm39) |
missense |
probably damaging |
0.96 |
|
PIT4366001:Or5m8
|
UTSW |
2 |
85,822,385 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0344:Or5m8
|
UTSW |
2 |
85,822,726 (GRCm39) |
nonsense |
probably null |
|
|
R1168:Or5m8
|
UTSW |
2 |
85,823,028 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1170:Or5m8
|
UTSW |
2 |
85,823,040 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2345:Or5m8
|
UTSW |
2 |
85,822,166 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2915:Or5m8
|
UTSW |
2 |
85,822,389 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3498:Or5m8
|
UTSW |
2 |
85,822,774 (GRCm39) |
missense |
probably benign |
0.43 |
|
R4747:Or5m8
|
UTSW |
2 |
85,822,271 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4859:Or5m8
|
UTSW |
2 |
85,823,075 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4991:Or5m8
|
UTSW |
2 |
85,822,631 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5438:Or5m8
|
UTSW |
2 |
85,822,925 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6362:Or5m8
|
UTSW |
2 |
85,822,285 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7458:Or5m8
|
UTSW |
2 |
85,822,994 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7535:Or5m8
|
UTSW |
2 |
85,822,245 (GRCm39) |
missense |
probably benign |
0.37 |
|
R8807:Or5m8
|
UTSW |
2 |
85,823,172 (GRCm39) |
makesense |
probably null |
|
|
R9130:Or5m8
|
UTSW |
2 |
85,822,819 (GRCm39) |
nonsense |
probably null |
|
|
R9366:Or5m8
|
UTSW |
2 |
85,822,731 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R9687:Or5m8
|
UTSW |
2 |
85,822,220 (GRCm39) |
missense |
probably benign |
|
|
R9746:Or5m8
|
UTSW |
2 |
85,823,091 (GRCm39) |
missense |
probably benign |
0.18 |
|
R9794:Or5m8
|
UTSW |
2 |
85,822,464 (GRCm39) |
missense |
probably benign |
0.16 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGATATGTGCTTCTCTTCCAATGTG -3'
(R):5'- TCCAGCTACAACAAGCATGG -3'
Sequencing Primer
(F):5'- CAAAGATGCTCCAGATTTTCCTG -3'
(R):5'- CTACAACAAGCATGGAGGTTTC -3'
|
| Posted On |
2015-04-30 |
Incidental Mutation