Incidental Mutation 'R4106:Tcerg1l'
ID 321391
Institutional Source Beutler Lab
Gene Symbol Tcerg1l
Ensembl Gene ENSMUSG00000091002
Gene Name transcription elongation regulator 1-like
Synonyms 5730476P14Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4106 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 137810703-137999459 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 137861673 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 352 (V352A)
Ref Sequence ENSEMBL: ENSMUSP00000124476 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000160436]
AlphaFold Q3B807
Predicted Effect probably damaging
Transcript: ENSMUST00000160436
AA Change: V352A

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000124476
Gene: ENSMUSG00000091002
AA Change: V352A

DomainStartEndE-ValueType
low complexity region 6 44 N/A INTRINSIC
low complexity region 52 97 N/A INTRINSIC
WW 146 178 2.11e1 SMART
low complexity region 235 249 N/A INTRINSIC
WW 344 376 3.29e-4 SMART
low complexity region 402 415 N/A INTRINSIC
FF 454 507 4.57e-12 SMART
FF 520 574 1.53e-4 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161213
Predicted Effect noncoding transcript
Transcript: ENSMUST00000162222
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.7%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 29 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acad10 G T 5: 121,769,527 (GRCm39) S643Y probably damaging Het
Acox3 T C 5: 35,758,896 (GRCm39) F369S probably damaging Het
Cacna1a A G 8: 85,310,324 (GRCm39) I1461V possibly damaging Het
Cdc42bpb A C 12: 111,261,579 (GRCm39) V107G probably benign Het
Cdhr4 A G 9: 107,873,459 (GRCm39) D397G probably damaging Het
Chd1l T C 3: 97,505,019 (GRCm39) T183A probably benign Het
Cnbd2 T C 2: 156,177,318 (GRCm39) V92A probably damaging Het
Col1a2 G A 6: 4,518,822 (GRCm39) probably benign Het
Cyp2j7 T C 4: 96,087,687 (GRCm39) T408A possibly damaging Het
H2-T24 A G 17: 36,328,370 (GRCm39) S38P possibly damaging Het
Mapkapk3 A G 9: 107,134,265 (GRCm39) V333A probably damaging Het
Muc5ac T G 7: 141,356,572 (GRCm39) V1053G possibly damaging Het
Myh1 T C 11: 67,102,403 (GRCm39) V898A probably benign Het
Nnt T C 13: 119,533,327 (GRCm39) I113V probably benign Het
Obscn T C 11: 59,022,472 (GRCm39) R758G possibly damaging Het
Or5d38 A T 2: 87,954,817 (GRCm39) C171S possibly damaging Het
Rpl10a T A 17: 28,549,933 (GRCm39) Y205N probably benign Het
Ryr3 C G 2: 112,506,218 (GRCm39) R3443P probably damaging Het
Scn3a A G 2: 65,325,379 (GRCm39) I1046T probably benign Het
Sertad4 AGAGGAGGAGGAGGAGGAGGAGGA AGAGGAGGAGGAGGAGGAGGA 1: 192,529,050 (GRCm39) probably benign Het
Sipa1l2 T C 8: 126,219,047 (GRCm39) K97E probably damaging Het
Slc19a3 A T 1: 83,000,678 (GRCm39) F113Y probably damaging Het
Slc22a6 A G 19: 8,595,874 (GRCm39) Q72R probably benign Het
St8sia2 A C 7: 73,610,509 (GRCm39) L258R probably damaging Het
Tas1r2 G A 4: 139,387,363 (GRCm39) R245H probably benign Het
Tpo G A 12: 30,142,585 (GRCm39) P713L probably damaging Het
Tpp2 T C 1: 44,040,617 (GRCm39) Y293H possibly damaging Het
Ttn G C 2: 76,581,215 (GRCm39) A23226G probably damaging Het
Ttn C T 2: 76,608,809 (GRCm39) V15990I probably benign Het
Other mutations in Tcerg1l
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00504:Tcerg1l APN 7 137,811,533 (GRCm39) missense probably damaging 0.99
IGL01402:Tcerg1l APN 7 137,861,568 (GRCm39) missense probably damaging 0.98
IGL01510:Tcerg1l APN 7 137,996,034 (GRCm39) splice site probably benign
IGL01638:Tcerg1l APN 7 137,881,805 (GRCm39) missense probably damaging 1.00
IGL01710:Tcerg1l APN 7 137,996,789 (GRCm39) missense possibly damaging 0.81
IGL02547:Tcerg1l APN 7 137,850,100 (GRCm39) critical splice donor site probably null
IGL02887:Tcerg1l APN 7 137,831,619 (GRCm39) missense probably damaging 1.00
IGL03105:Tcerg1l APN 7 137,850,173 (GRCm39) splice site probably benign
IGL03348:Tcerg1l APN 7 137,815,100 (GRCm39) missense probably damaging 0.97
R0378:Tcerg1l UTSW 7 137,878,384 (GRCm39) missense probably benign 0.01
R1474:Tcerg1l UTSW 7 137,881,804 (GRCm39) missense probably damaging 0.99
R1589:Tcerg1l UTSW 7 137,963,496 (GRCm39) missense probably damaging 0.99
R1658:Tcerg1l UTSW 7 137,995,909 (GRCm39) missense probably damaging 0.98
R1792:Tcerg1l UTSW 7 137,963,595 (GRCm39) missense probably benign 0.07
R1807:Tcerg1l UTSW 7 137,996,826 (GRCm39) missense probably benign 0.34
R2920:Tcerg1l UTSW 7 137,850,108 (GRCm39) missense probably damaging 0.99
R3148:Tcerg1l UTSW 7 137,861,596 (GRCm39) missense probably benign
R4180:Tcerg1l UTSW 7 137,878,405 (GRCm39) critical splice acceptor site probably null
R4241:Tcerg1l UTSW 7 137,999,361 (GRCm39) missense unknown
R4898:Tcerg1l UTSW 7 137,819,786 (GRCm39) missense probably damaging 0.99
R5652:Tcerg1l UTSW 7 137,881,775 (GRCm39) missense probably damaging 0.97
R6646:Tcerg1l UTSW 7 137,996,912 (GRCm39) splice site probably null
R6824:Tcerg1l UTSW 7 137,995,844 (GRCm39) critical splice donor site probably null
R7414:Tcerg1l UTSW 7 137,819,786 (GRCm39) missense probably damaging 0.97
R7490:Tcerg1l UTSW 7 137,861,557 (GRCm39) missense probably damaging 1.00
R8810:Tcerg1l UTSW 7 137,811,526 (GRCm39) missense possibly damaging 0.79
R8889:Tcerg1l UTSW 7 137,999,260 (GRCm39) nonsense probably null
R8892:Tcerg1l UTSW 7 137,999,260 (GRCm39) nonsense probably null
R9146:Tcerg1l UTSW 7 137,831,588 (GRCm39) missense probably damaging 1.00
R9374:Tcerg1l UTSW 7 137,995,998 (GRCm39) missense possibly damaging 0.95
R9392:Tcerg1l UTSW 7 137,815,164 (GRCm39) missense probably damaging 0.98
R9402:Tcerg1l UTSW 7 137,811,551 (GRCm39) missense probably damaging 0.99
R9428:Tcerg1l UTSW 7 137,811,490 (GRCm39) missense probably damaging 0.99
R9551:Tcerg1l UTSW 7 137,995,998 (GRCm39) missense possibly damaging 0.95
R9552:Tcerg1l UTSW 7 137,995,998 (GRCm39) missense possibly damaging 0.95
R9572:Tcerg1l UTSW 7 137,881,787 (GRCm39) missense probably benign 0.07
R9624:Tcerg1l UTSW 7 137,995,923 (GRCm39) missense possibly damaging 0.71
Predicted Primers PCR Primer
(F):5'- TATTTCCCCTCGTGACCAGG -3'
(R):5'- CCTTGCTGGTAAAAGGGGAC -3'

Sequencing Primer
(F):5'- TTCCGGCAGCAACAGCAG -3'
(R):5'- CCTGCTAACCAAATAAGAGAGTGTG -3'
Posted On 2015-06-12