Incidental Mutation 'R4276:Gm6578'
ID 322696
Institutional Source Beutler Lab
Gene Symbol Gm6578
Ensembl Gene ENSMUSG00000057223
Gene Name predicted gene 6578
Synonyms
MMRRC Submission 041647-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4276 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 12099517-12109579 bp(-) (GRCm39)
Type of Mutation exon
DNA Base Change (assembly) G to A at 12100187 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s):
AlphaFold no structure available at present
Predicted Effect noncoding transcript
Transcript: ENSMUST00000080891
SMART Domains Protein: ENSMUSP00000093822
Gene: ENSMUSG00000057223

DomainStartEndE-ValueType
Pfam:Ribosomal_L32p 78 135 3.3e-12 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000203684
Meta Mutation Damage Score 0.0869 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.8%
  • 10x: 97.6%
  • 20x: 95.9%
Validation Efficiency 98% (46/47)
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acad8 C A 9: 26,889,745 (GRCm39) Q316H probably null Het
Arl6ip1 AAAATAAATAAATAAATAAATAAATA AAAATAAATAAATAAATAAATAAATAAATA 7: 117,721,122 (GRCm39) probably benign Het
Brix1 T C 15: 10,481,833 (GRCm39) D101G possibly damaging Het
Cfap36 A G 11: 29,180,584 (GRCm39) probably null Het
Chrnb3 A G 8: 27,883,779 (GRCm39) N172S probably damaging Het
Csnk1e T C 15: 79,313,967 (GRCm39) N37S probably damaging Het
Ern1 T C 11: 106,298,007 (GRCm39) I705V probably benign Het
Gimap8 T C 6: 48,636,017 (GRCm39) M594T probably benign Het
Gpc6 A G 14: 117,673,328 (GRCm39) D195G probably damaging Het
Gpcpd1 T C 2: 132,382,207 (GRCm39) K412E probably damaging Het
Insm1 C A 2: 146,064,888 (GRCm39) H235N probably benign Het
Jmjd8 A G 17: 26,048,787 (GRCm39) probably benign Het
Kbtbd8 T C 6: 95,103,914 (GRCm39) V521A probably damaging Het
Kcna5 T C 6: 126,510,329 (GRCm39) T600A probably damaging Het
Kctd6 G C 14: 8,222,806 (GRCm38) R216P probably damaging Het
Lbx1 C A 19: 45,223,528 (GRCm39) V47L probably benign Het
Mefv A T 16: 3,533,433 (GRCm39) N279K probably benign Het
Mroh1 T G 15: 76,278,051 (GRCm39) V24G probably damaging Het
Nt5c1b A G 12: 10,424,886 (GRCm39) E142G probably damaging Het
Or4f4b G T 2: 111,313,849 (GRCm39) V25L probably damaging Het
Or8u3-ps G A 2: 85,952,623 (GRCm39) A119T probably damaging Het
Padi2 A G 4: 140,663,859 (GRCm39) E404G possibly damaging Het
Pitpnb A G 5: 111,519,258 (GRCm39) probably null Het
Plxna4 T C 6: 32,177,883 (GRCm39) N1006S probably benign Het
Proc A G 18: 32,268,967 (GRCm39) V6A probably benign Het
Prrc2c T A 1: 162,501,160 (GRCm39) K1214N probably damaging Het
Pstpip2 A G 18: 77,949,556 (GRCm39) I122V probably benign Het
Pus10 A G 11: 23,656,895 (GRCm39) E207G probably damaging Het
Rabl2 G A 15: 89,468,391 (GRCm39) probably benign Het
Rbp3 G A 14: 33,680,607 (GRCm39) V1070I probably benign Het
Rtl6 T A 15: 84,441,397 (GRCm39) probably benign Het
Scn7a T G 2: 66,514,407 (GRCm39) K1122N probably damaging Het
Spag16 A G 1: 69,912,640 (GRCm39) probably benign Het
Spata13 C T 14: 60,993,745 (GRCm39) R396C probably damaging Het
Stmn4 A T 14: 66,593,166 (GRCm39) probably benign Het
Syp G T X: 7,504,931 (GRCm39) probably benign Het
Tmem260 C T 14: 48,715,093 (GRCm39) T249M probably damaging Het
Tnrc6b A G 15: 80,786,172 (GRCm39) I1239V probably benign Het
Ubr3 C T 2: 69,768,731 (GRCm39) Q510* probably null Het
Vegfa A G 17: 46,342,392 (GRCm39) V142A probably benign Het
Vmn2r93 T C 17: 18,525,092 (GRCm39) I250T possibly damaging Het
Other mutations in Gm6578
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01958:Gm6578 APN 6 12,099,766 (GRCm39) exon noncoding transcript
R2130:Gm6578 UTSW 6 12,100,186 (GRCm39) exon noncoding transcript
R4279:Gm6578 UTSW 6 12,100,187 (GRCm39) exon noncoding transcript
Predicted Primers PCR Primer
(F):5'- TAACCACATTCAGGGCAAATGTC -3'
(R):5'- AAGTTGGCGGAACATGACTG -3'

Sequencing Primer
(F):5'- CACATTCAGGGCAAATGTCTATATTG -3'
(R):5'- TTGGCGGAACATGACTGAAAAATTAG -3'
Posted On 2015-06-20