Mutagenetix > Incidental Mutation

Incidental Mutation 'R4299:Dnai3'

323464

Institutional Source

Beutler Lab

Gene Symbol

Dnai3

Ensembl Gene

ENSMUSG00000043020

Gene Name

dynein axonemal intermediate chain 3

Synonyms

4931433A13Rik, Wdr63, Ida7, IC140

MMRRC Submission

041087-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.115) question?

Stock #

R4299 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

145746281-145813855 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 145774561 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Asparagine at position 429 (D429N)

Ref Sequence

ENSEMBL: ENSMUSP00000124475 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000160285]

AlphaFold

B2RY71

Predicted Effect

probably damaging
Transcript: ENSMUST00000160285
AA Change: D429N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000124475
Gene: ENSMUSG00000043020
AA Change: D429N

Domain	Start	End	E-Value	Type
low complexity region	3	22	N/A	INTRINSIC
low complexity region	26	35	N/A	INTRINSIC
low complexity region	133	150	N/A	INTRINSIC
low complexity region	165	180	N/A	INTRINSIC
Blast:WD40	321	367	6e-19	BLAST
low complexity region	375	383	N/A	INTRINSIC
WD40	390	429	6.34e-2	SMART
WD40	470	527	1.15e-4	SMART
low complexity region	536	553	N/A	INTRINSIC
WD40	693	732	1.07e1	SMART
WD40	737	776	1.1e2	SMART
coiled coil region	867	902	N/A	INTRINSIC

Meta Mutation Damage Score

0.5288

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.4%
20x: 95.4%

Validation Efficiency

97% (76/78)

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc12	T	C	8: 87,258,154 (GRCm39)		probably null	Het
Akna	A	T	4: 63,316,269 (GRCm39)	D31E	possibly damaging	Het
Apbb2	A	T	5: 66,470,721 (GRCm39)	H528Q	probably damaging	Het
Atp6v1g3	C	A	1: 138,211,462 (GRCm39)	Y47*	probably null	Het
AW551984	T	C	9: 39,504,275 (GRCm39)	T564A	probably benign	Het
C4b	T	C	17: 34,950,118 (GRCm39)	D1384G	possibly damaging	Het
Cbfa2t2	G	A	2: 154,365,848 (GRCm39)	V353I	probably damaging	Het
Ccdc121	A	G	5: 31,644,870 (GRCm39)	R208G	possibly damaging	Het
Cdh20	T	C	1: 109,988,731 (GRCm39)	I211T	probably damaging	Het
Cep170b	T	C	12: 112,705,739 (GRCm39)	S1166P	probably damaging	Het
Col9a2	C	G	4: 120,911,455 (GRCm39)	R599G	probably damaging	Het
Crygs	G	A	16: 22,624,161 (GRCm39)	Q149*	probably null	Het
Cyp2c70	T	C	19: 40,172,372 (GRCm39)	Q90R	probably benign	Het
Cyp3a41b	T	C	5: 145,510,487 (GRCm39)	Y129C	possibly damaging	Het
Dnah10	A	G	5: 124,896,989 (GRCm39)	T3645A	probably damaging	Het
Dolk	A	T	2: 30,175,200 (GRCm39)	W282R	probably damaging	Het
Dsg2	T	A	18: 20,729,008 (GRCm39)		probably null	Het
Dysf	A	G	6: 84,045,059 (GRCm39)	T297A	possibly damaging	Het
Flt1	G	T	5: 147,620,717 (GRCm39)	D142E	probably benign	Het
Frmd4a	C	A	2: 4,337,882 (GRCm39)	N29K	probably benign	Het
Fxyd7	A	T	7: 30,744,407 (GRCm39)	M36K	probably benign	Het
Gabbr1	C	T	17: 37,366,792 (GRCm39)	R178*	probably null	Het
Gnal	C	G	18: 67,221,654 (GRCm39)	P19R	unknown	Het
Gprc5b	G	A	7: 118,583,437 (GRCm39)	A144V	possibly damaging	Het
Il1rapl1	A	T	X: 86,344,313 (GRCm39)	I194N	probably damaging	Het
Kics2	C	A	10: 121,581,351 (GRCm39)	H117Q	probably benign	Het
Klhl24	T	C	16: 19,925,754 (GRCm39)	M94T	probably damaging	Het
Kmt2e	T	A	5: 23,669,912 (GRCm39)	I133N	probably damaging	Het
Macf1	A	G	4: 123,293,199 (GRCm39)	I5381T	probably damaging	Het
Madd	A	G	2: 91,000,148 (GRCm39)	L197P	probably damaging	Het
Mapkapk3	G	A	9: 107,134,648 (GRCm39)	T296M	probably damaging	Het
Micall2	T	C	5: 139,695,226 (GRCm39)		probably benign	Het
Myh9	T	C	15: 77,654,164 (GRCm39)	T1214A	probably benign	Het
Ncapd3	A	G	9: 26,963,623 (GRCm39)	N492S	probably benign	Het
Neurl4	A	C	11: 69,799,887 (GRCm39)	D1055A	probably damaging	Het
Nrbp1	T	C	5: 31,407,943 (GRCm39)		probably null	Het
Or13a20	T	C	7: 140,232,156 (GRCm39)	V88A	probably benign	Het
Or1e21	A	T	11: 73,344,827 (GRCm39)	D70E	probably damaging	Het
Or52z1	T	A	7: 103,437,202 (GRCm39)	H94L	probably benign	Het
Or5j3	A	T	2: 86,128,585 (GRCm39)	I142F	possibly damaging	Het
Or6k8-ps1	T	A	1: 173,979,878 (GRCm39)	Y265*	probably null	Het
Or8b42	T	G	9: 38,342,108 (GRCm39)	Y177D	probably damaging	Het
Or8d1b	T	A	9: 38,887,055 (GRCm39)	F28I	probably damaging	Het
Or8g19	T	C	9: 39,056,295 (GRCm39)	S300P	probably benign	Het
Patj	C	A	4: 98,565,558 (GRCm39)	N1090K	possibly damaging	Het
Pde8a	A	G	7: 80,977,783 (GRCm39)	D692G	probably benign	Het
Ppa2	G	T	3: 133,073,603 (GRCm39)	K220N	probably damaging	Het
Pramel32	T	C	4: 88,546,419 (GRCm39)	K137E	probably damaging	Het
Ptgr3	A	T	18: 84,112,626 (GRCm39)	I101F	possibly damaging	Het
Rad54b	A	G	4: 11,597,865 (GRCm39)	H250R	probably damaging	Het
Reln	A	C	5: 22,125,485 (GRCm39)	C2733G	probably damaging	Het
Rgs14	A	G	13: 55,531,566 (GRCm39)	T497A	probably damaging	Het
Rpl13-ps3	T	A	14: 59,130,972 (GRCm39)		noncoding transcript	Het
Scn11a	T	G	9: 119,594,572 (GRCm39)	I1274L	probably damaging	Het
Sco1	A	T	11: 66,946,626 (GRCm39)	H133L	possibly damaging	Het
Slc4a8	T	C	15: 100,694,521 (GRCm39)		probably null	Het
Smc2	C	T	4: 52,440,238 (GRCm39)		probably benign	Het
Spata18	T	C	5: 73,824,245 (GRCm39)	I156T	probably benign	Het
St3gal2	T	C	8: 111,688,991 (GRCm39)	M177T	probably benign	Het
Stt3a	A	G	9: 36,674,640 (GRCm39)	F48L	probably damaging	Het
Syvn1	C	T	19: 6,099,951 (GRCm39)		probably benign	Het
Szt2	A	G	4: 118,222,603 (GRCm39)		probably benign	Het
Telo2	A	T	17: 25,334,230 (GRCm39)	S6T	possibly damaging	Het
Tnfrsf11b	T	C	15: 54,115,491 (GRCm39)	M369V	probably benign	Het
Tnfrsf13b	C	G	11: 61,031,643 (GRCm39)		probably null	Het
Vmn1r234	A	T	17: 21,449,283 (GRCm39)	M66L	probably benign	Het
Vmn2r12	C	A	5: 109,239,830 (GRCm39)	M244I	probably benign	Het
Wdfy2	T	A	14: 63,162,589 (GRCm39)	L97*	probably null	Het
Xrcc5	T	C	1: 72,433,879 (GRCm39)	*733Q	probably null	Het
Zfp1004	G	A	2: 150,032,653 (GRCm39)	D17N	probably damaging	Het
Zfp516	G	A	18: 83,005,622 (GRCm39)	G842D	possibly damaging	Het
Zwilch	A	G	9: 64,062,444 (GRCm39)		probably null	Het

Other mutations in Dnai3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00093:Dnai3	APN	3	145,788,759 (GRCm39)	missense	probably benign
IGL00565:Dnai3	APN	3	145,750,674 (GRCm39)	splice site	probably benign
IGL01339:Dnai3	APN	3	145,748,591 (GRCm39)	missense	probably benign	0.14
IGL01952:Dnai3	APN	3	145,802,918 (GRCm39)	missense	probably damaging	0.96
IGL02663:Dnai3	APN	3	145,760,312 (GRCm39)	missense	possibly damaging	0.53
IGL02710:Dnai3	APN	3	145,753,903 (GRCm39)	missense	possibly damaging	0.96
P0041:Dnai3	UTSW	3	145,786,997 (GRCm39)	missense	possibly damaging	0.96
R0014:Dnai3	UTSW	3	145,787,178 (GRCm39)	splice site	probably null
R0014:Dnai3	UTSW	3	145,787,178 (GRCm39)	splice site	probably null
R0498:Dnai3	UTSW	3	145,787,119 (GRCm39)	missense	possibly damaging	0.54
R0589:Dnai3	UTSW	3	145,768,086 (GRCm39)	missense	probably benign	0.01
R1484:Dnai3	UTSW	3	145,802,996 (GRCm39)	missense	probably benign	0.02
R1537:Dnai3	UTSW	3	145,748,504 (GRCm39)	missense	probably damaging	0.98
R1611:Dnai3	UTSW	3	145,801,113 (GRCm39)	missense	probably damaging	1.00
R1743:Dnai3	UTSW	3	145,803,017 (GRCm39)	missense	possibly damaging	0.81
R1861:Dnai3	UTSW	3	145,788,801 (GRCm39)	missense	probably damaging	1.00
R1991:Dnai3	UTSW	3	145,769,235 (GRCm39)	missense	possibly damaging	0.82
R2185:Dnai3	UTSW	3	145,772,619 (GRCm39)	missense	possibly damaging	0.76
R4620:Dnai3	UTSW	3	145,748,564 (GRCm39)	missense	probably damaging	1.00
R4649:Dnai3	UTSW	3	145,753,922 (GRCm39)	missense	probably damaging	1.00
R4914:Dnai3	UTSW	3	145,772,582 (GRCm39)	missense	probably damaging	0.98
R4948:Dnai3	UTSW	3	145,788,820 (GRCm39)	nonsense	probably null
R5578:Dnai3	UTSW	3	145,802,983 (GRCm39)	nonsense	probably null
R6130:Dnai3	UTSW	3	145,748,559 (GRCm39)	missense	probably benign	0.25
R6162:Dnai3	UTSW	3	145,750,617 (GRCm39)	missense	probably damaging	1.00
R6291:Dnai3	UTSW	3	145,772,648 (GRCm39)	missense	probably benign	0.00
R6390:Dnai3	UTSW	3	145,801,143 (GRCm39)	missense	probably damaging	1.00
R6560:Dnai3	UTSW	3	145,801,161 (GRCm39)	missense	possibly damaging	0.79
R6893:Dnai3	UTSW	3	145,786,184 (GRCm39)	missense	probably damaging	1.00
R7090:Dnai3	UTSW	3	145,746,582 (GRCm39)	missense	possibly damaging	0.80
R7102:Dnai3	UTSW	3	145,761,459 (GRCm39)	missense	possibly damaging	0.49
R7111:Dnai3	UTSW	3	145,803,028 (GRCm39)	missense	probably damaging	0.99
R7260:Dnai3	UTSW	3	145,752,295 (GRCm39)	missense	probably benign	0.01
R7288:Dnai3	UTSW	3	145,787,007 (GRCm39)	missense	probably damaging	0.97
R7411:Dnai3	UTSW	3	145,802,900 (GRCm39)	missense	probably damaging	0.98
R7417:Dnai3	UTSW	3	145,798,835 (GRCm39)	splice site	probably null
R7466:Dnai3	UTSW	3	145,761,373 (GRCm39)	missense	probably benign	0.01
R7860:Dnai3	UTSW	3	145,772,675 (GRCm39)	missense	probably damaging	0.99
R7964:Dnai3	UTSW	3	145,774,531 (GRCm39)	missense	probably benign	0.09
R8013:Dnai3	UTSW	3	145,787,040 (GRCm39)	missense	probably damaging	1.00
R8059:Dnai3	UTSW	3	145,752,428 (GRCm39)	missense	possibly damaging	0.75
R8191:Dnai3	UTSW	3	145,800,066 (GRCm39)	missense	probably damaging	1.00
R8354:Dnai3	UTSW	3	145,802,982 (GRCm39)	missense	probably damaging	1.00
R8454:Dnai3	UTSW	3	145,802,982 (GRCm39)	missense	probably damaging	1.00
R8770:Dnai3	UTSW	3	145,752,298 (GRCm39)	missense	probably benign	0.01
R8967:Dnai3	UTSW	3	145,761,395 (GRCm39)	missense	possibly damaging	0.95
R9135:Dnai3	UTSW	3	145,772,589 (GRCm39)	missense	probably benign	0.39
R9310:Dnai3	UTSW	3	145,802,895 (GRCm39)	critical splice donor site	probably null
R9664:Dnai3	UTSW	3	145,748,594 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- AAATGATTTCCTGTGCTGCCTAC -3'
(R):5'- CGGATGCTGAGTTACTTCCG -3'

Sequencing Primer
(F):5'- CACGGAGTCTTTAAAAACATGGC -3'
(R):5'- GAGTTACTTCCGCTACAAACTAGGTC -3'

Posted On

2015-06-20