Mutagenetix > Incidental Mutation

Incidental Mutation 'R4334:Vmn2r118'

323717

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r118

Ensembl Gene

ENSMUSG00000091504

Gene Name

vomeronasal 2, receptor 118

Synonyms

Vmn2r119, EG668547, EG383258

MMRRC Submission

041664-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.121) question?

Stock #

R4334 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

55899341-55931672 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 55917347 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Leucine at position 388 (F388L)

Ref Sequence

ENSEMBL: ENSMUSP00000131128 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000168440]

AlphaFold

E9Q1C1

Predicted Effect

possibly damaging
Transcript: ENSMUST00000168440
AA Change: F388L

PolyPhen 2 Score 0.585 (Sensitivity: 0.88; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000131128
Gene: ENSMUSG00000091504
AA Change: F388L

Domain	Start	End	E-Value	Type
signal peptide	1	22	N/A	INTRINSIC
Pfam:ANF_receptor	142	470	4.6e-27	PFAM
Pfam:NCD3G	513	566	2.6e-20	PFAM
Pfam:7tm_3	599	834	5.9e-55	PFAM

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.5%
20x: 95.8%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 42 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca17	A	T	17: 24,537,242 (GRCm39)	V447E	probably damaging	Het
Adcyap1	T	C	17: 93,509,696 (GRCm39)	L49P	probably benign	Het
B4galt4	T	C	16: 38,572,621 (GRCm39)	I102T	probably damaging	Het
Cc2d2a	A	G	5: 43,840,476 (GRCm39)	D110G	probably benign	Het
Ccdc141	C	T	2: 77,000,776 (GRCm39)	V19I	probably damaging	Het
Ccdc39	A	G	3: 33,892,031 (GRCm39)	L147P	probably damaging	Het
Cdc5l	A	T	17: 45,721,712 (GRCm39)	D519E	probably benign	Het
Cdh23	G	T	10: 60,220,838 (GRCm39)	T1305K	probably damaging	Het
Cfi	T	A	3: 129,644,478 (GRCm39)	V158D	possibly damaging	Het
Clstn2	T	G	9: 97,345,581 (GRCm39)	Y589S	probably damaging	Het
Dsp	A	G	13: 38,380,640 (GRCm39)	K1863E	possibly damaging	Het
Enpp3	A	T	10: 24,669,487 (GRCm39)	M491K	probably damaging	Het
Fhdc1	C	A	3: 84,352,133 (GRCm39)	V1031F	probably benign	Het
Fkbp15	G	A	4: 62,221,456 (GRCm39)	A1170V	possibly damaging	Het
Foxa2	T	C	2: 147,886,623 (GRCm39)	N64S	possibly damaging	Het
Foxm1	T	C	6: 128,342,930 (GRCm39)	I88T	probably damaging	Het
Gm3173	A	T	14: 15,728,364 (GRCm39)	I8L	possibly damaging	Het
Gpatch3	A	G	4: 133,309,792 (GRCm39)	D375G	probably damaging	Het
Herc2	T	C	7: 55,876,402 (GRCm39)	F4436L	probably damaging	Het
Htr3b	G	A	9: 48,856,809 (GRCm39)	A223V	probably damaging	Het
Iars2	T	A	1: 185,035,591 (GRCm39)	T550S	probably benign	Het
Igsf9	A	T	1: 172,321,779 (GRCm39)	K149*	probably null	Het
Khnyn	A	G	14: 56,131,499 (GRCm39)	D536G	probably damaging	Het
Kng1	T	C	16: 22,898,370 (GRCm39)	V409A	possibly damaging	Het
Krt1	AAGCTGCCACCCCCAAAGCCACCACCGCCGTAGCTGCCACCCCCAAAGCCACCACCGCCGTAGCTGCCACCCCCAAAGCCACCAC	AAGCTGCCACCCCCAAAGCCACCACCGCCGTAGCTGCCACCCCCAAAGCCACCAC	15: 101,758,813 (GRCm39)		probably benign	Het
Madd	C	T	2: 90,970,917 (GRCm39)	V1508I	probably benign	Het
Micall2	T	C	5: 139,699,105 (GRCm39)	E527G	probably damaging	Het
Myo7b	A	G	18: 32,110,040 (GRCm39)	S1141P	probably damaging	Het
Ncoa2	G	A	1: 13,245,187 (GRCm39)	P504S	possibly damaging	Het
Notch1	G	A	2: 26,350,048 (GRCm39)	T2364I	probably benign	Het
Pde4c	T	A	8: 71,202,475 (GRCm39)		probably null	Het
Pik3cb	A	G	9: 98,943,904 (GRCm39)	L633P	probably damaging	Het
Ranbp2	T	A	10: 58,299,816 (GRCm39)	D483E	probably damaging	Het
Sh3tc2	A	G	18: 62,123,392 (GRCm39)	N718D	probably damaging	Het
Spast	G	A	17: 74,659,010 (GRCm39)	A126T	probably damaging	Het
Ssc5d	T	C	7: 4,946,663 (GRCm39)	S1006P	probably benign	Het
Tmprss6	T	A	15: 78,343,627 (GRCm39)		probably null	Het
Ulk1	C	T	5: 110,937,223 (GRCm39)	R691Q	probably benign	Het
Unc79	C	T	12: 103,045,233 (GRCm39)	T803M	probably benign	Het
Vmn2r71	T	C	7: 85,269,042 (GRCm39)	V415A	probably benign	Het
Wdr4	A	T	17: 31,718,126 (GRCm39)	F316Y	possibly damaging	Het
Zfp810	T	C	9: 22,190,080 (GRCm39)	Y276C	probably benign	Het

Other mutations in Vmn2r118

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00091:Vmn2r118	APN	17	55,899,708 (GRCm39)	missense	probably damaging	1.00
IGL00976:Vmn2r118	APN	17	55,900,204 (GRCm39)	missense	probably damaging	1.00
IGL01419:Vmn2r118	APN	17	55,900,000 (GRCm39)	missense	probably benign	0.01
IGL01796:Vmn2r118	APN	17	55,915,585 (GRCm39)	missense	probably benign	0.30
IGL01799:Vmn2r118	APN	17	55,899,990 (GRCm39)	missense	probably damaging	1.00
IGL02002:Vmn2r118	APN	17	55,899,619 (GRCm39)	missense	probably damaging	1.00
IGL02075:Vmn2r118	APN	17	55,917,517 (GRCm39)	missense	probably benign	0.18
IGL02172:Vmn2r118	APN	17	55,931,598 (GRCm39)	missense	probably benign	0.00
IGL02529:Vmn2r118	APN	17	55,917,870 (GRCm39)	missense	possibly damaging	0.58
IGL02712:Vmn2r118	APN	17	55,899,655 (GRCm39)	missense	probably benign	0.21
IGL03096:Vmn2r118	APN	17	55,914,996 (GRCm39)	missense	probably damaging	1.00
R0306:Vmn2r118	UTSW	17	55,915,616 (GRCm39)	missense	possibly damaging	0.89
R0329:Vmn2r118	UTSW	17	55,917,717 (GRCm39)	missense	probably damaging	1.00
R0330:Vmn2r118	UTSW	17	55,917,717 (GRCm39)	missense	probably damaging	1.00
R0396:Vmn2r118	UTSW	17	55,915,643 (GRCm39)	missense	probably benign	0.00
R0411:Vmn2r118	UTSW	17	55,918,021 (GRCm39)	splice site	probably benign
R0513:Vmn2r118	UTSW	17	55,917,970 (GRCm39)	nonsense	probably null
R0627:Vmn2r118	UTSW	17	55,917,772 (GRCm39)	missense	probably benign	0.01
R0638:Vmn2r118	UTSW	17	55,915,466 (GRCm39)	missense	probably benign	0.03
R1328:Vmn2r118	UTSW	17	55,915,620 (GRCm39)	missense	probably benign	0.01
R1366:Vmn2r118	UTSW	17	55,900,237 (GRCm39)	nonsense	probably null
R1465:Vmn2r118	UTSW	17	55,917,935 (GRCm39)	missense	probably benign	0.33
R1465:Vmn2r118	UTSW	17	55,917,935 (GRCm39)	missense	probably benign	0.33
R1511:Vmn2r118	UTSW	17	55,915,496 (GRCm39)	nonsense	probably null
R1515:Vmn2r118	UTSW	17	55,917,643 (GRCm39)	missense	probably benign	0.25
R1550:Vmn2r118	UTSW	17	55,915,083 (GRCm39)	missense	probably damaging	1.00
R1779:Vmn2r118	UTSW	17	55,918,530 (GRCm39)	missense	probably benign	0.03
R1834:Vmn2r118	UTSW	17	55,899,456 (GRCm39)	missense	probably damaging	1.00
R1840:Vmn2r118	UTSW	17	55,917,406 (GRCm39)	nonsense	probably null
R1854:Vmn2r118	UTSW	17	55,918,556 (GRCm39)	missense	possibly damaging	0.57
R1967:Vmn2r118	UTSW	17	55,899,882 (GRCm39)	missense	probably damaging	1.00
R1976:Vmn2r118	UTSW	17	55,899,925 (GRCm39)	missense	probably damaging	1.00
R2308:Vmn2r118	UTSW	17	55,931,650 (GRCm39)	missense	probably benign	0.33
R3700:Vmn2r118	UTSW	17	55,915,421 (GRCm39)	missense	possibly damaging	0.68
R4647:Vmn2r118	UTSW	17	55,917,665 (GRCm39)	missense	probably damaging	1.00
R4709:Vmn2r118	UTSW	17	55,917,860 (GRCm39)	missense	probably damaging	1.00
R4805:Vmn2r118	UTSW	17	55,899,581 (GRCm39)	missense	probably damaging	1.00
R4858:Vmn2r118	UTSW	17	55,899,894 (GRCm39)	missense	probably damaging	0.98
R5384:Vmn2r118	UTSW	17	55,918,565 (GRCm39)	missense	probably benign	0.00
R5385:Vmn2r118	UTSW	17	55,918,565 (GRCm39)	missense	probably benign	0.00
R5664:Vmn2r118	UTSW	17	55,899,765 (GRCm39)	missense	possibly damaging	0.46
R5740:Vmn2r118	UTSW	17	55,900,103 (GRCm39)	missense	probably benign	0.00
R5927:Vmn2r118	UTSW	17	55,931,494 (GRCm39)	missense	probably benign	0.04
R6143:Vmn2r118	UTSW	17	55,899,871 (GRCm39)	missense	possibly damaging	0.92
R6513:Vmn2r118	UTSW	17	55,915,093 (GRCm39)	missense	probably damaging	1.00
R6573:Vmn2r118	UTSW	17	55,899,996 (GRCm39)	missense	probably damaging	1.00
R6760:Vmn2r118	UTSW	17	55,899,714 (GRCm39)	missense	possibly damaging	0.92
R6794:Vmn2r118	UTSW	17	55,899,348 (GRCm39)	missense	possibly damaging	0.48
R6929:Vmn2r118	UTSW	17	55,917,440 (GRCm39)	missense	probably benign	0.01
R7201:Vmn2r118	UTSW	17	55,915,496 (GRCm39)	nonsense	probably null
R7539:Vmn2r118	UTSW	17	55,899,853 (GRCm39)	missense	probably damaging	0.98
R7836:Vmn2r118	UTSW	17	55,900,242 (GRCm39)	missense	probably damaging	0.99
R8179:Vmn2r118	UTSW	17	55,915,484 (GRCm39)	missense	probably benign	0.36
R8248:Vmn2r118	UTSW	17	55,917,936 (GRCm39)	missense	probably benign	0.18
R8347:Vmn2r118	UTSW	17	55,917,423 (GRCm39)	missense	possibly damaging	0.94
R8415:Vmn2r118	UTSW	17	55,915,057 (GRCm39)	missense	probably benign	0.08
R8428:Vmn2r118	UTSW	17	55,915,642 (GRCm39)	missense	probably benign	0.33
R8917:Vmn2r118	UTSW	17	55,917,216 (GRCm39)	missense	possibly damaging	0.82
R8993:Vmn2r118	UTSW	17	55,917,835 (GRCm39)	missense	possibly damaging	0.72
R9038:Vmn2r118	UTSW	17	55,918,649 (GRCm39)	missense	probably damaging	1.00
R9155:Vmn2r118	UTSW	17	55,917,207 (GRCm39)	missense	probably null	0.83
R9603:Vmn2r118	UTSW	17	55,899,837 (GRCm39)	missense	probably damaging	1.00
R9742:Vmn2r118	UTSW	17	55,918,009 (GRCm39)	missense	probably damaging	0.98
R9749:Vmn2r118	UTSW	17	55,915,415 (GRCm39)	critical splice donor site	probably null
R9792:Vmn2r118	UTSW	17	55,899,496 (GRCm39)	missense	probably damaging	0.99
R9793:Vmn2r118	UTSW	17	55,899,496 (GRCm39)	missense	probably damaging	0.99
R9795:Vmn2r118	UTSW	17	55,899,496 (GRCm39)	missense	probably damaging	0.99
X0022:Vmn2r118	UTSW	17	55,900,218 (GRCm39)	missense	probably damaging	1.00
Z1176:Vmn2r118	UTSW	17	55,917,655 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- CCAATAGCTGCTAATGGAAGACC -3'
(R):5'- GGGAGAAAGACTTCAGCCTTACTTC -3'

Sequencing Primer
(F):5'- GCTGCTAATGGAAGACCTTTACCTG -3'
(R):5'- GGGACTCTCACTATTTCACAATATC -3'

Posted On

2015-06-24