Incidental Mutation 'R4359:Htr1b'
| ID |
324809 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Htr1b
|
| Ensembl Gene |
ENSMUSG00000049511 |
| Gene Name |
5-hydroxytryptamine (serotonin) receptor 1B |
| Synonyms |
5-HT<1B> receptor, 5-HT1B receptor, 5HT1B receptor |
| MMRRC Submission |
041670-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.140)
|
| Stock # |
R4359 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
9 |
| Chromosomal Location |
81510344-81515881 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to A
at 81514404 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Alanine to Serine
at position 68
(A68S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000139389
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051005]
[ENSMUST00000183482]
|
| AlphaFold |
P28334 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000051005
AA Change: A68S
PolyPhen 2
Score 0.123 (Sensitivity: 0.93; Specificity: 0.86)
|
| SMART Domains |
Protein: ENSMUSP00000050898
Gene: ENSMUSG00000049511
AA Change: A68S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srx
|
53 |
188 |
6e-8 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
56 |
380 |
7.5e-12 |
PFAM |
|
Pfam:7tm_1
|
62 |
365 |
1.8e-80 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000180663
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000181447
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000181893
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000183482
AA Change: A68S
PolyPhen 2
Score 0.123 (Sensitivity: 0.93; Specificity: 0.86)
|
| SMART Domains |
Protein: ENSMUSP00000139389
Gene: ENSMUSG00000049511
AA Change: A68S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srx
|
53 |
188 |
5.7e-8 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
56 |
380 |
7.5e-12 |
PFAM |
|
Pfam:7tm_1
|
62 |
365 |
1e-91 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000183536
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000183781
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 97.0%
- 20x: 94.4%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this intronless gene is a G-protein coupled receptor for serotonin (5-hydroxytryptamine). Ligand binding activates second messengers that inhibit the activity of adenylate cyclase and manage the release of serotonin, dopamine, and acetylcholine in the brain. The encoded protein may be involved in several neuropsychiatric disorders and therefore is often a target of antidepressant and other psychotherapeutic drugs. [provided by RefSeq, Nov 2015]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit an increase in body weight, aggression, drinking behavior, and osteoblast proliferation and bone mass, and show altered spatial learning and operant conditional behavior as well as reduced anxiety-related response and startle reflex, and small testes. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 45 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca13 |
G |
T |
11: 9,247,629 (GRCm39) |
V2459F |
probably benign |
Het |
| Acot1 |
T |
C |
12: 84,061,314 (GRCm39) |
Y207H |
probably damaging |
Het |
| Anapc1 |
A |
G |
2: 128,465,476 (GRCm39) |
V1668A |
possibly damaging |
Het |
| Atr |
T |
A |
9: 95,833,589 (GRCm39) |
I2613N |
probably damaging |
Het |
| Baz2b |
A |
G |
2: 59,731,957 (GRCm39) |
I2027T |
possibly damaging |
Het |
| C2cd3 |
T |
G |
7: 100,090,296 (GRCm39) |
H466Q |
probably damaging |
Het |
| Cdc14b |
T |
A |
13: 64,396,225 (GRCm39) |
I15F |
probably benign |
Het |
| Cep135 |
G |
T |
5: 76,759,561 (GRCm39) |
K438N |
possibly damaging |
Het |
| Cnot1 |
T |
C |
8: 96,466,476 (GRCm39) |
D1587G |
probably damaging |
Het |
| Cxcl16 |
C |
A |
11: 70,349,631 (GRCm39) |
V65L |
possibly damaging |
Het |
| Dhx36 |
T |
A |
3: 62,382,699 (GRCm39) |
T783S |
probably benign |
Het |
| Disp3 |
T |
C |
4: 148,356,389 (GRCm39) |
N157S |
probably benign |
Het |
| Efcab3 |
G |
T |
11: 104,624,547 (GRCm39) |
|
probably null |
Het |
| Fem1al |
A |
T |
11: 29,774,669 (GRCm39) |
S263T |
probably benign |
Het |
| Gfod2 |
T |
C |
8: 106,444,177 (GRCm39) |
N122S |
possibly damaging |
Het |
| Grin3b |
T |
A |
10: 79,808,731 (GRCm39) |
D160E |
probably benign |
Het |
| Grm7 |
G |
T |
6: 110,623,309 (GRCm39) |
V161F |
probably damaging |
Het |
| Ifit2 |
A |
T |
19: 34,550,544 (GRCm39) |
D28V |
possibly damaging |
Het |
| Ifna15 |
G |
T |
4: 88,476,079 (GRCm39) |
T135N |
probably benign |
Het |
| Igsf9b |
G |
A |
9: 27,220,774 (GRCm39) |
V47I |
possibly damaging |
Het |
| Kif24 |
A |
G |
4: 41,413,827 (GRCm39) |
|
probably null |
Het |
| Klhl25 |
T |
C |
7: 75,516,480 (GRCm39) |
V462A |
probably damaging |
Het |
| Klk14 |
G |
A |
7: 43,341,501 (GRCm39) |
C51Y |
probably damaging |
Het |
| L3mbtl3 |
A |
G |
10: 26,203,639 (GRCm39) |
V397A |
unknown |
Het |
| Lpcat2 |
C |
A |
8: 93,599,734 (GRCm39) |
P234Q |
probably benign |
Het |
| Lrp1b |
A |
C |
2: 40,793,077 (GRCm39) |
C2532W |
probably damaging |
Het |
| Malt1 |
T |
C |
18: 65,609,300 (GRCm39) |
V768A |
probably benign |
Het |
| Mindy3 |
A |
T |
2: 12,401,020 (GRCm39) |
W233R |
probably damaging |
Het |
| Ncor1 |
T |
C |
11: 62,249,736 (GRCm39) |
K1054R |
probably damaging |
Het |
| Nin |
T |
A |
12: 70,061,712 (GRCm39) |
T2051S |
probably benign |
Het |
| Or10j5 |
C |
A |
1: 172,784,647 (GRCm39) |
A95E |
probably benign |
Het |
| Or51ac3 |
A |
G |
7: 103,213,742 (GRCm39) |
F248S |
probably benign |
Het |
| Pcsk1 |
T |
C |
13: 75,260,838 (GRCm39) |
S354P |
possibly damaging |
Het |
| Pilra |
T |
C |
5: 137,829,576 (GRCm39) |
T160A |
probably benign |
Het |
| Plekha5 |
G |
C |
6: 140,537,414 (GRCm39) |
E540D |
probably benign |
Het |
| Prps2 |
T |
A |
X: 166,146,545 (GRCm39) |
K176* |
probably null |
Het |
| Rasgrf2 |
C |
A |
13: 92,038,796 (GRCm39) |
D1017Y |
probably damaging |
Het |
| Slc15a4 |
A |
G |
5: 127,681,600 (GRCm39) |
|
probably null |
Het |
| Spsb1 |
T |
C |
4: 149,991,232 (GRCm39) |
H112R |
probably damaging |
Het |
| Srd5a3 |
T |
A |
5: 76,295,547 (GRCm39) |
F79Y |
probably damaging |
Het |
| Stxbp4 |
C |
T |
11: 90,385,470 (GRCm39) |
W506* |
probably null |
Het |
| Timeless |
C |
A |
10: 128,083,211 (GRCm39) |
Q653K |
probably benign |
Het |
| Trio |
G |
A |
15: 27,749,883 (GRCm39) |
Q1129* |
probably null |
Het |
| Vrk3 |
C |
T |
7: 44,424,866 (GRCm39) |
T427M |
probably benign |
Het |
| Zzef1 |
T |
A |
11: 72,714,334 (GRCm39) |
S275T |
probably damaging |
Het |
|
| Other mutations in Htr1b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02932:Htr1b
|
APN |
9 |
81,513,689 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03144:Htr1b
|
APN |
9 |
81,513,998 (GRCm39) |
missense |
probably damaging |
0.96 |
|
IGL03350:Htr1b
|
APN |
9 |
81,514,175 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0395:Htr1b
|
UTSW |
9 |
81,513,704 (GRCm39) |
missense |
probably benign |
0.09 |
|
R0697:Htr1b
|
UTSW |
9 |
81,513,516 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R1569:Htr1b
|
UTSW |
9 |
81,514,340 (GRCm39) |
missense |
probably benign |
0.01 |
|
R3411:Htr1b
|
UTSW |
9 |
81,514,094 (GRCm39) |
missense |
probably benign |
0.00 |
|
R3821:Htr1b
|
UTSW |
9 |
81,514,487 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4487:Htr1b
|
UTSW |
9 |
81,513,592 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4489:Htr1b
|
UTSW |
9 |
81,513,592 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4715:Htr1b
|
UTSW |
9 |
81,513,563 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R5502:Htr1b
|
UTSW |
9 |
81,513,854 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R6393:Htr1b
|
UTSW |
9 |
81,513,810 (GRCm39) |
missense |
probably benign |
0.11 |
|
R6616:Htr1b
|
UTSW |
9 |
81,514,487 (GRCm39) |
missense |
probably benign |
|
|
R6900:Htr1b
|
UTSW |
9 |
81,513,623 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7038:Htr1b
|
UTSW |
9 |
81,514,296 (GRCm39) |
missense |
probably benign |
|
|
R7850:Htr1b
|
UTSW |
9 |
81,514,652 (GRCm39) |
splice site |
probably null |
|
|
R7954:Htr1b
|
UTSW |
9 |
81,513,998 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8074:Htr1b
|
UTSW |
9 |
81,513,582 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9098:Htr1b
|
UTSW |
9 |
81,514,481 (GRCm39) |
missense |
|
|
|
| Predicted Primers |
PCR Primer
(F):5'- ATGCATGATGGAAGCAGTGC -3'
(R):5'- AGGAGCAGGGTATTCAGTGC -3'
Sequencing Primer
(F):5'- TGCAACAGGTGATATCCGAC -3'
(R):5'- AGGGTATTCAGTGCGCCCC -3'
|
| Posted On |
2015-07-06 |
Incidental Mutation