Mutagenetix > Incidental Mutation

Incidental Mutation 'R4375:Cd209c'

325072

Institutional Source

Beutler Lab

Gene Symbol

Cd209c

Ensembl Gene

ENSMUSG00000040165

Gene Name

CD209c antigen

Synonyms

mSIGNR2, SIGNR2

MMRRC Submission

041119-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.120) question?

Stock #

R4375 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

3990222-4004746 bp(-) (GRCm39)

Type of Mutation

exon

DNA Base Change (assembly)

T to C at 4004635 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s):

AlphaFold

Q91ZW9

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000127592

SMART Domains

Protein: ENSMUSP00000120433
Gene: ENSMUSG00000040165

Domain	Start	End	E-Value	Type
transmembrane domain	51	73	N/A	INTRINSIC

Meta Mutation Damage Score

0.1807

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 97.1%
20x: 94.6%

Validation Efficiency

100% (37/37)

Allele List at MGI

Other mutations in this stock

Total: 37 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adhfe1	A	T	1: 9,631,853 (GRCm39)		probably benign	Het
Cntnap1	A	G	11: 101,073,079 (GRCm39)	D561G	probably damaging	Het
Csf1	T	A	3: 107,664,055 (GRCm39)	T38S	probably damaging	Het
Cyp4b1	T	C	4: 115,493,510 (GRCm39)	T191A	probably benign	Het
Dapk1	A	T	13: 60,909,403 (GRCm39)	M1339L	probably benign	Het
Dpm3	T	C	3: 89,174,215 (GRCm39)	Y59H	probably damaging	Het
Eif2ak4	A	G	2: 118,258,405 (GRCm39)	Y585C	probably damaging	Het
Ercc1	G	A	7: 19,081,057 (GRCm39)		probably benign	Het
Fam184b	T	C	5: 45,699,685 (GRCm39)	D577G	probably benign	Het
Gon4l	C	A	3: 88,814,694 (GRCm39)	P1888T	probably benign	Het
Hsf2bp	C	T	17: 32,206,322 (GRCm39)	D270N	probably null	Het
Lactbl1	T	C	4: 136,364,902 (GRCm39)	V418A	possibly damaging	Het
Lifr	A	T	15: 7,196,379 (GRCm39)	M188L	probably benign	Het
Ltbp1	G	T	17: 75,619,992 (GRCm39)	G760V	probably damaging	Het
Marchf11	A	G	15: 26,309,532 (GRCm39)	E62G	probably damaging	Het
Nlrp12	A	G	7: 3,289,576 (GRCm39)	L312P	possibly damaging	Het
Or1l4	T	A	2: 37,091,574 (GRCm39)	M107K	probably benign	Het
Or52ae7	T	C	7: 103,119,278 (GRCm39)	S11P	probably damaging	Het
Or8c20	T	C	9: 38,260,465 (GRCm39)	F23L	probably benign	Het
Pcdh17	T	C	14: 84,685,711 (GRCm39)	V726A	possibly damaging	Het
Pdia4	G	A	6: 47,775,326 (GRCm39)	R495W	probably damaging	Het
Phf20l1	T	C	15: 66,487,071 (GRCm39)	S369P	probably benign	Het
Polq	G	T	16: 36,833,543 (GRCm39)	V79F	probably damaging	Het
Prcc	A	G	3: 87,774,714 (GRCm39)	Y363H	probably damaging	Het
Proser3	A	G	7: 30,240,096 (GRCm39)	V336A	possibly damaging	Het
Rbbp8	C	T	18: 11,858,467 (GRCm39)	T646M	probably benign	Het
Rgs1	T	C	1: 144,123,644 (GRCm39)	T94A	probably benign	Het
Rpl11	G	A	4: 135,778,454 (GRCm39)		probably benign	Het
Slc14a2	G	A	18: 78,250,283 (GRCm39)	R62C	probably damaging	Het
Snx9	G	A	17: 5,958,901 (GRCm39)	W292*	probably null	Het
St14	T	C	9: 31,001,754 (GRCm39)	I784V	probably benign	Het
Steep1	C	A	X: 36,087,812 (GRCm39)	C206F	probably benign	Het
Strc	A	G	2: 121,211,304 (GRCm39)	S14P	unknown	Het
Ttc23l	CT	CTTGGATT	15: 10,537,648 (GRCm39)		probably benign	Het
Ttc23l	G	A	15: 10,537,652 (GRCm39)	S206L	probably benign	Het
Ubap1	G	A	4: 41,371,850 (GRCm39)		probably null	Het
Zfr	T	C	15: 12,118,426 (GRCm39)		probably null	Het

Other mutations in Cd209c

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00089:Cd209c	APN	8	3,990,339 (GRCm39)	missense	probably damaging	1.00
IGL01340:Cd209c	APN	8	3,995,892 (GRCm39)	missense	probably benign	0.00
IGL02682:Cd209c	APN	8	3,990,324 (GRCm39)	missense	probably damaging	0.99
R1311:Cd209c	UTSW	8	3,995,908 (GRCm39)	start codon destroyed	probably benign
R1859:Cd209c	UTSW	8	3,994,953 (GRCm39)	missense	probably benign
R4374:Cd209c	UTSW	8	4,004,635 (GRCm39)	exon	noncoding transcript
R4377:Cd209c	UTSW	8	4,004,635 (GRCm39)	exon	noncoding transcript
R4769:Cd209c	UTSW	8	3,994,953 (GRCm39)	missense	probably benign
R4786:Cd209c	UTSW	8	3,995,698 (GRCm39)	missense	possibly damaging	0.77
R4841:Cd209c	UTSW	8	3,995,905 (GRCm39)	missense	probably benign	0.00
R4842:Cd209c	UTSW	8	3,995,905 (GRCm39)	missense	probably benign	0.00
R4869:Cd209c	UTSW	8	3,994,077 (GRCm39)	missense	probably benign	0.00
R5333:Cd209c	UTSW	8	3,994,976 (GRCm39)	missense	probably damaging	1.00
R5835:Cd209c	UTSW	8	3,995,699 (GRCm39)	missense	probably benign	0.01
R6369:Cd209c	UTSW	8	3,994,984 (GRCm39)	missense	probably damaging	1.00
R6497:Cd209c	UTSW	8	3,994,122 (GRCm39)	missense	possibly damaging	0.72
R6591:Cd209c	UTSW	8	3,995,680 (GRCm39)	missense	probably benign	0.14
R6691:Cd209c	UTSW	8	3,995,680 (GRCm39)	missense	probably benign	0.14
R7181:Cd209c	UTSW	8	3,995,712 (GRCm39)	missense	probably benign	0.01
R8067:Cd209c	UTSW	8	3,995,700 (GRCm39)	missense	probably benign	0.12
R8701:Cd209c	UTSW	8	3,995,892 (GRCm39)	missense	probably benign	0.00
R9722:Cd209c	UTSW	8	3,995,905 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- TGAAGGAGTATCTGGTGCCAC -3'
(R):5'- GAGCCATTACATGCTCATCCATTC -3'

Sequencing Primer
(F):5'- ATCTGGTGCCACTGGGTATC -3'
(R):5'- ATCCATTCCAGGAATGCTGG -3'

Posted On

2015-07-06