Incidental Mutation 'R4492:Cyp2d22'
ID |
330804 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cyp2d22
|
Ensembl Gene |
ENSMUSG00000061740 |
Gene Name |
cytochrome P450, family 2, subfamily d, polypeptide 22 |
Synonyms |
2D22 |
MMRRC Submission |
041581-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.074)
|
Stock # |
R4492 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
15 |
Chromosomal Location |
82254728-82264461 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 82258571 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Histidine to Tyrosine
at position 97
(H97Y)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000023083
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000023083]
[ENSMUST00000228986]
|
AlphaFold |
Q9JKY7 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000023083
AA Change: H97Y
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
SMART Domains |
Protein: ENSMUSP00000023083 Gene: ENSMUSG00000061740 AA Change: H97Y
Domain | Start | End | E-Value | Type |
transmembrane domain
|
9 |
28 |
N/A |
INTRINSIC |
Pfam:p450
|
37 |
497 |
8.1e-139 |
PFAM |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000228986
AA Change: H70Y
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000229438
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000229599
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000230370
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000230663
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.9%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 48 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Actr6 |
T |
G |
10: 89,561,676 (GRCm39) |
I157L |
probably benign |
Het |
Amph |
T |
C |
13: 19,333,928 (GRCm39) |
V663A |
possibly damaging |
Het |
Anapc16 |
A |
G |
10: 59,826,724 (GRCm39) |
S50P |
possibly damaging |
Het |
Ank3 |
T |
A |
10: 69,644,755 (GRCm39) |
V60D |
probably damaging |
Het |
Btbd9 |
A |
G |
17: 30,746,545 (GRCm39) |
Y94H |
probably damaging |
Het |
Chil3 |
A |
G |
3: 106,063,017 (GRCm39) |
I191T |
probably damaging |
Het |
Clpb |
T |
C |
7: 101,436,929 (GRCm39) |
L668P |
probably damaging |
Het |
Dhrs7 |
A |
T |
12: 72,699,899 (GRCm39) |
N244K |
probably damaging |
Het |
Dusp4 |
C |
T |
8: 35,274,890 (GRCm39) |
T3M |
possibly damaging |
Het |
Edc4 |
GGATTTTAGCCA |
G |
8: 106,611,700 (GRCm39) |
|
probably null |
Het |
Etl4 |
G |
A |
2: 20,811,676 (GRCm39) |
S1621N |
possibly damaging |
Het |
Fam174a |
T |
C |
1: 95,241,701 (GRCm39) |
S54P |
probably benign |
Het |
Fdxacb1 |
T |
C |
9: 50,681,547 (GRCm39) |
F7S |
probably damaging |
Het |
Focad |
G |
A |
4: 88,278,142 (GRCm39) |
|
probably null |
Het |
Gpr156 |
T |
A |
16: 37,812,468 (GRCm39) |
L268H |
probably damaging |
Het |
Gpr17 |
A |
T |
18: 32,080,304 (GRCm39) |
I253N |
possibly damaging |
Het |
H2-T23 |
A |
T |
17: 36,343,058 (GRCm39) |
N106K |
probably damaging |
Het |
Hspa4 |
T |
C |
11: 53,171,296 (GRCm39) |
R303G |
probably damaging |
Het |
Irgm1 |
G |
A |
11: 48,756,955 (GRCm39) |
|
silent |
Het |
Jph1 |
A |
C |
1: 17,067,770 (GRCm39) |
I114S |
probably damaging |
Het |
Kcna1 |
C |
T |
6: 126,619,238 (GRCm39) |
D361N |
possibly damaging |
Het |
Kcna4 |
G |
A |
2: 107,126,436 (GRCm39) |
R390Q |
probably damaging |
Het |
Lum |
C |
A |
10: 97,404,300 (GRCm39) |
P65H |
probably damaging |
Het |
Mc4r |
A |
G |
18: 66,992,711 (GRCm39) |
L134P |
probably benign |
Het |
Mroh8 |
A |
T |
2: 157,099,960 (GRCm39) |
I248N |
probably damaging |
Het |
Nos2 |
A |
G |
11: 78,840,921 (GRCm39) |
T677A |
probably benign |
Het |
Nup37 |
T |
A |
10: 88,010,791 (GRCm39) |
F257I |
possibly damaging |
Het |
Or13c3 |
T |
C |
4: 52,855,764 (GRCm39) |
I250V |
probably benign |
Het |
Or6k6 |
C |
T |
1: 173,944,770 (GRCm39) |
V271I |
probably benign |
Het |
Pdzd2 |
C |
T |
15: 12,385,723 (GRCm39) |
D1016N |
possibly damaging |
Het |
Pdzd2 |
A |
C |
15: 12,419,567 (GRCm39) |
M501R |
possibly damaging |
Het |
Pitx1 |
T |
C |
13: 55,976,465 (GRCm39) |
K65E |
probably benign |
Het |
Pla1a |
C |
T |
16: 38,229,972 (GRCm39) |
A247T |
probably benign |
Het |
Prex2 |
T |
A |
1: 11,232,487 (GRCm39) |
S851R |
probably benign |
Het |
Prss8 |
A |
G |
7: 127,528,979 (GRCm39) |
S26P |
probably damaging |
Het |
Rasef |
A |
C |
4: 73,652,740 (GRCm39) |
L587R |
probably damaging |
Het |
Rock2 |
T |
A |
12: 17,027,684 (GRCm39) |
C1334S |
probably damaging |
Het |
Rsf1 |
CGGCGGCGG |
CGGCGGCGGGGGCGGCGG |
7: 97,229,130 (GRCm39) |
|
probably benign |
Het |
Serpina6 |
A |
G |
12: 103,613,146 (GRCm39) |
W385R |
probably damaging |
Het |
Slc12a5 |
T |
C |
2: 164,821,263 (GRCm39) |
M249T |
probably benign |
Het |
Srsf9 |
T |
A |
5: 115,470,651 (GRCm39) |
I117N |
probably damaging |
Het |
Taf1 |
G |
T |
X: 100,586,665 (GRCm39) |
M313I |
possibly damaging |
Het |
Tmem30a |
T |
C |
9: 79,684,567 (GRCm39) |
H95R |
probably damaging |
Het |
Top2b |
T |
G |
14: 16,409,189 (GRCm38) |
I777M |
probably damaging |
Het |
Ttc21a |
T |
C |
9: 119,770,346 (GRCm39) |
V139A |
probably benign |
Het |
Zfp236 |
A |
T |
18: 82,648,125 (GRCm39) |
V1012D |
probably damaging |
Het |
Zfp612 |
C |
A |
8: 110,815,929 (GRCm39) |
Q379K |
probably damaging |
Het |
Zfp930 |
C |
T |
8: 69,680,898 (GRCm39) |
Q198* |
probably null |
Het |
|
Other mutations in Cyp2d22 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01305:Cyp2d22
|
APN |
15 |
82,255,869 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01750:Cyp2d22
|
APN |
15 |
82,258,570 (GRCm39) |
missense |
probably benign |
0.12 |
IGL01801:Cyp2d22
|
APN |
15 |
82,257,046 (GRCm39) |
missense |
probably benign |
0.41 |
IGL02449:Cyp2d22
|
APN |
15 |
82,257,442 (GRCm39) |
missense |
probably benign |
0.00 |
ANU22:Cyp2d22
|
UTSW |
15 |
82,255,869 (GRCm39) |
missense |
probably damaging |
1.00 |
R0165:Cyp2d22
|
UTSW |
15 |
82,257,481 (GRCm39) |
missense |
probably benign |
0.06 |
R0294:Cyp2d22
|
UTSW |
15 |
82,258,646 (GRCm39) |
missense |
possibly damaging |
0.86 |
R1381:Cyp2d22
|
UTSW |
15 |
82,256,709 (GRCm39) |
missense |
probably benign |
0.00 |
R1479:Cyp2d22
|
UTSW |
15 |
82,256,137 (GRCm39) |
missense |
probably damaging |
0.97 |
R1562:Cyp2d22
|
UTSW |
15 |
82,258,179 (GRCm39) |
missense |
probably damaging |
0.99 |
R1968:Cyp2d22
|
UTSW |
15 |
82,257,373 (GRCm39) |
missense |
probably benign |
0.04 |
R1972:Cyp2d22
|
UTSW |
15 |
82,260,028 (GRCm39) |
missense |
probably benign |
0.11 |
R4575:Cyp2d22
|
UTSW |
15 |
82,256,133 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4702:Cyp2d22
|
UTSW |
15 |
82,260,118 (GRCm39) |
missense |
probably damaging |
1.00 |
R4703:Cyp2d22
|
UTSW |
15 |
82,260,118 (GRCm39) |
missense |
probably damaging |
1.00 |
R5344:Cyp2d22
|
UTSW |
15 |
82,255,839 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5523:Cyp2d22
|
UTSW |
15 |
82,256,772 (GRCm39) |
missense |
probably damaging |
1.00 |
R5888:Cyp2d22
|
UTSW |
15 |
82,258,014 (GRCm39) |
missense |
probably benign |
|
R6060:Cyp2d22
|
UTSW |
15 |
82,260,086 (GRCm39) |
missense |
probably benign |
0.00 |
R6108:Cyp2d22
|
UTSW |
15 |
82,256,106 (GRCm39) |
missense |
possibly damaging |
0.59 |
R6146:Cyp2d22
|
UTSW |
15 |
82,258,036 (GRCm39) |
critical splice acceptor site |
probably null |
|
R6279:Cyp2d22
|
UTSW |
15 |
82,258,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R6563:Cyp2d22
|
UTSW |
15 |
82,256,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R7597:Cyp2d22
|
UTSW |
15 |
82,260,053 (GRCm39) |
missense |
probably damaging |
1.00 |
R7709:Cyp2d22
|
UTSW |
15 |
82,258,612 (GRCm39) |
missense |
possibly damaging |
0.88 |
R7839:Cyp2d22
|
UTSW |
15 |
82,256,772 (GRCm39) |
missense |
probably damaging |
1.00 |
R8094:Cyp2d22
|
UTSW |
15 |
82,258,556 (GRCm39) |
missense |
probably benign |
0.19 |
R8302:Cyp2d22
|
UTSW |
15 |
82,256,021 (GRCm39) |
critical splice donor site |
probably null |
|
R8515:Cyp2d22
|
UTSW |
15 |
82,258,113 (GRCm39) |
missense |
probably benign |
0.27 |
R9245:Cyp2d22
|
UTSW |
15 |
82,256,748 (GRCm39) |
missense |
probably damaging |
0.97 |
R9323:Cyp2d22
|
UTSW |
15 |
82,258,207 (GRCm39) |
missense |
probably damaging |
1.00 |
R9521:Cyp2d22
|
UTSW |
15 |
82,256,688 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1186:Cyp2d22
|
UTSW |
15 |
82,260,086 (GRCm39) |
missense |
probably benign |
0.00 |
Z1190:Cyp2d22
|
UTSW |
15 |
82,260,086 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- GCCCATCACTACTGTAAGATCC -3'
(R):5'- TGCCAAGTCCTATCCGGTAC -3'
Sequencing Primer
(F):5'- ATCACTACTGTAAGATCCTCTGTC -3'
(R):5'- AGTCCTATCCGGTACAGCTAAGTG -3'
|
Posted On |
2015-07-21 |