Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00482:Gm5884'

332191

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gm5884

Ensembl Gene

ENSMUSG00000037827

Gene Name

predicted pseudogene 5884

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.214) question?

Stock #

IGL00482

Quality Score

Status

Chromosome

Chromosomal Location

128621876-128623354 bp(+) (GRCm39)

Type of Mutation

unclassified

DNA Base Change (assembly)

A to T at 128623166 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s):

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000036712

SMART Domains

Protein: ENSMUSP00000036849
Gene: ENSMUSG00000037827

Domain	Start	End	E-Value	Type
VHS	13	148	4.03e-68	SMART
Pfam:GAT	228	303	1e-24	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000203669

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000204875

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 27 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acacb	A	G	5: 114,338,350 (GRCm39)	T722A	probably damaging	Het
Akr1b10	G	T	6: 34,365,837 (GRCm39)		probably benign	Het
Amy1	G	T	3: 113,349,781 (GRCm39)	T463K	probably damaging	Het
Arid4b	T	C	13: 14,365,719 (GRCm39)		probably benign	Het
Arl2	A	G	19: 6,191,082 (GRCm39)	L17P	probably damaging	Het
C2cd2	T	C	16: 97,671,420 (GRCm39)	E493G	probably damaging	Het
Cdk19	A	G	10: 40,345,644 (GRCm39)	E239G	possibly damaging	Het
Cit	A	G	5: 116,076,814 (GRCm39)	D719G	probably damaging	Het
Commd3	T	C	2: 18,678,739 (GRCm39)	V58A	possibly damaging	Het
Cyp2c29	A	C	19: 39,313,467 (GRCm39)	D360A	probably damaging	Het
Eps8	A	G	6: 137,482,477 (GRCm39)	Y492H	probably benign	Het
Gk	A	G	X: 84,804,207 (GRCm39)	L78P	possibly damaging	Het
Lat2	A	T	5: 134,635,630 (GRCm39)		probably null	Het
Lrrc4c	C	A	2: 97,460,730 (GRCm39)	S452*	probably null	Het
Ntsr2	T	C	12: 16,709,849 (GRCm39)	C377R	probably damaging	Het
Padi3	A	C	4: 140,530,935 (GRCm39)	M29R	possibly damaging	Het
Pcdh9	A	G	14: 93,564,130 (GRCm39)	S1067P	probably damaging	Het
Prrc2a	T	C	17: 35,373,959 (GRCm39)	D1462G	probably damaging	Het
Rassf4	A	G	6: 116,622,089 (GRCm39)	F168L	possibly damaging	Het
Serpinb1c	T	C	13: 33,067,958 (GRCm39)	K213E	probably damaging	Het
Siglec1	C	T	2: 130,921,245 (GRCm39)	R642Q	probably benign	Het
Snrnp200	T	G	2: 127,072,055 (GRCm39)	V1214G	possibly damaging	Het
Sorcs3	G	A	19: 48,592,303 (GRCm39)	G323S	probably benign	Het
Spidr	A	G	16: 15,932,833 (GRCm39)	V149A	possibly damaging	Het
Stat4	A	T	1: 52,113,856 (GRCm39)	I189F	probably benign	Het
Tep1	T	C	14: 51,080,641 (GRCm39)	Y1387C	probably damaging	Het
Tmprss9	G	A	10: 80,730,262 (GRCm39)		probably null	Het

Other mutations in Gm5884

Allele	Source	Chr	Coord	Type	Predicted Effect
IGL01668:Gm5884	APN	6	128,622,377 (GRCm39)	unclassified	noncoding transcript
IGL01730:Gm5884	APN	6	128,622,669 (GRCm39)	unclassified	noncoding transcript
IGL02401:Gm5884	APN	6	128,622,377 (GRCm39)	unclassified	noncoding transcript
IGL02601:Gm5884	APN	6	128,622,749 (GRCm39)	unclassified	noncoding transcript
IGL02812:Gm5884	APN	6	128,622,738 (GRCm39)	unclassified	noncoding transcript
IGL03178:Gm5884	APN	6	128,622,690 (GRCm39)	unclassified	noncoding transcript
R0488:Gm5884	UTSW	6	128,623,031 (GRCm39)	unclassified	noncoding transcript
R1633:Gm5884	UTSW	6	128,623,028 (GRCm39)	unclassified	noncoding transcript
R1925:Gm5884	UTSW	6	128,622,050 (GRCm39)	unclassified	noncoding transcript
R2919:Gm5884	UTSW	6	128,622,021 (GRCm39)	unclassified	noncoding transcript
R4640:Gm5884	UTSW	6	128,622,734 (GRCm39)	unclassified	noncoding transcript

Posted On

2015-08-05