Incidental Mutation 'IGL00435:Trav13-2'
ID 332417
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Trav13-2
Ensembl Gene ENSMUSG00000076846
Gene Name T cell receptor alpha variable 13-2
Synonyms
Accession Numbers
Essential gene? Not available question?
Stock # IGL00435
Quality Score
Status
Chromosome 14
Chromosomal Location 53872345-53872856 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 53872688 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Leucine at position 55 (F55L)
Ref Sequence ENSEMBL: ENSMUSP00000100435 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000103658]
AlphaFold A0A075B649
Predicted Effect possibly damaging
Transcript: ENSMUST00000103658
AA Change: F55L

PolyPhen 2 Score 0.922 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000100435
Gene: ENSMUSG00000076846
AA Change: F55L

DomainStartEndE-ValueType
low complexity region 4 13 N/A INTRINSIC
IGv 38 109 1.55e-9 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arhgap28 A T 17: 68,152,796 (GRCm39) D657E probably damaging Het
Cd200l1 A T 16: 45,264,483 (GRCm39) L25Q probably damaging Het
Cd68 T C 11: 69,556,676 (GRCm39) T44A probably damaging Het
Cecr2 C T 6: 120,733,678 (GRCm39) T555M probably damaging Het
Cep170b A G 12: 112,701,628 (GRCm39) Q169R probably damaging Het
Cs T C 10: 128,195,912 (GRCm39) F374L probably damaging Het
Dpy19l1 T C 9: 24,393,226 (GRCm39) E181G probably damaging Het
Efcab12 T C 6: 115,800,625 (GRCm39) T133A probably benign Het
Esr2 G A 12: 76,180,653 (GRCm39) R423W probably damaging Het
Eya4 T C 10: 23,034,995 (GRCm39) Y120C probably benign Het
Fbxw8 A G 5: 118,206,202 (GRCm39) M582T probably benign Het
Fcgbpl1 A T 7: 27,863,953 (GRCm39) D2575V probably damaging Het
Ghsr A G 3: 27,426,532 (GRCm39) E196G possibly damaging Het
Gm10024 G A 10: 77,547,295 (GRCm39) probably benign Het
Gpr65 A G 12: 98,241,815 (GRCm39) E156G probably damaging Het
Gtf3c3 T C 1: 54,466,694 (GRCm39) Y249C possibly damaging Het
H2-T23 G A 17: 36,342,673 (GRCm39) A155V probably damaging Het
Hadha A G 5: 30,327,171 (GRCm39) S556P probably benign Het
Hdac7 T A 15: 97,707,376 (GRCm39) K187N probably damaging Het
Inpp5j T C 11: 3,452,255 (GRCm39) I332V probably benign Het
Kank1 A G 19: 25,407,600 (GRCm39) D1198G probably benign Het
Kdr A G 5: 76,129,410 (GRCm39) L159P probably damaging Het
Me2 T C 18: 73,903,713 (GRCm39) E585G probably benign Het
Nfu1 A T 6: 86,992,577 (GRCm39) T64S probably damaging Het
Nsd3 A G 8: 26,166,728 (GRCm39) D632G probably benign Het
Pcna T C 2: 132,093,852 (GRCm39) D97G probably benign Het
Pgm2 A G 5: 64,265,612 (GRCm39) probably benign Het
Phactr1 C A 13: 43,110,122 (GRCm39) R2S probably damaging Het
Psmd11 T A 11: 80,361,210 (GRCm39) I347N possibly damaging Het
Rad21l T C 2: 151,495,436 (GRCm39) T416A probably benign Het
Ruvbl2 A T 7: 45,074,596 (GRCm39) S181T probably benign Het
Rxrb A G 17: 34,253,049 (GRCm39) T109A probably damaging Het
Ryr3 T A 2: 112,490,494 (GRCm39) Y3785F probably damaging Het
Sec16a T C 2: 26,320,113 (GRCm39) T1442A probably benign Het
Slc6a14 T A X: 21,600,363 (GRCm39) probably benign Het
Slco2b1 G A 7: 99,309,259 (GRCm39) Q691* probably null Het
Tent5c A G 3: 100,380,672 (GRCm39) V28A probably damaging Het
Them5 A G 3: 94,253,496 (GRCm39) T169A possibly damaging Het
Tst A T 15: 78,289,661 (GRCm39) S125T probably damaging Het
Ttn T C 2: 76,630,868 (GRCm39) T14179A probably benign Het
Vps37b A G 5: 124,148,850 (GRCm39) Y62H probably damaging Het
Other mutations in Trav13-2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01975:Trav13-2 APN 14 53,872,823 (GRCm39) missense possibly damaging 0.95
IGL02049:Trav13-2 APN 14 53,872,603 (GRCm39) missense probably damaging 0.98
IGL02049:Trav13-2 APN 14 53,872,602 (GRCm39) missense possibly damaging 0.85
IGL02049:Trav13-2 APN 14 53,872,604 (GRCm39) missense possibly damaging 0.92
IGL02977:Trav13-2 APN 14 53,872,764 (GRCm39) missense probably damaging 0.99
R4109:Trav13-2 UTSW 14 53,872,698 (GRCm39) missense probably benign
R7493:Trav13-2 UTSW 14 53,872,363 (GRCm39) missense possibly damaging 0.85
Posted On 2015-08-05