Incidental Mutation 'IGL00580:Fancg'
ID332699
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Fancg
Ensembl Gene ENSMUSG00000028453
Gene NameFanconi anemia, complementation group G
SynonymsXrcc9
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.329) question?
Stock #IGL00580
Quality Score
Status
Chromosome4
Chromosomal Location43002343-43010506 bp(-) (GRCm38)
Type of Mutationnonsense
DNA Base Change (assembly) A to T at 43003910 bp
ZygosityHeterozygous
Amino Acid Change Cysteine to Stop codon at position 506 (C506*)
Ref Sequence ENSEMBL: ENSMUSP00000030165 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000030164] [ENSMUST00000030165]
Predicted Effect probably benign
Transcript: ENSMUST00000030164
SMART Domains Protein: ENSMUSP00000030164
Gene: ENSMUSG00000028452

DomainStartEndE-ValueType
CDC48_N 25 108 6.85e-27 SMART
CDC48_2 125 191 3.77e-15 SMART
AAA 237 373 7.87e-24 SMART
AAA 510 649 2e-25 SMART
Pfam:Vps4_C 710 762 3.5e-7 PFAM
low complexity region 775 794 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000030165
AA Change: C506*
SMART Domains Protein: ENSMUSP00000030165
Gene: ENSMUSG00000028453
AA Change: C506*

DomainStartEndE-ValueType
low complexity region 51 74 N/A INTRINSIC
low complexity region 131 144 N/A INTRINSIC
low complexity region 164 179 N/A INTRINSIC
low complexity region 190 199 N/A INTRINSIC
Pfam:TPR_1 251 280 4.1e-6 PFAM
Pfam:TPR_2 251 281 7.3e-5 PFAM
Pfam:TPR_8 251 281 4.5e-3 PFAM
low complexity region 302 317 N/A INTRINSIC
low complexity region 401 418 N/A INTRINSIC
Blast:TPR 458 491 4e-9 BLAST
Blast:TPR 518 550 2e-12 BLAST
Predicted Effect noncoding transcript
Transcript: ENSMUST00000123332
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124645
Predicted Effect noncoding transcript
Transcript: ENSMUST00000125570
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127067
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134083
Predicted Effect noncoding transcript
Transcript: ENSMUST00000148018
Predicted Effect noncoding transcript
Transcript: ENSMUST00000148182
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The Fanconi anemia complementation group (FANC) currently includes FANCA, FANCB, FANCC, FANCD1 (also called BRCA2), FANCD2, FANCE, FANCF, FANCG, FANCI, FANCJ (also called BRIP1), FANCL, FANCM and FANCN (also called PALB2). The previously defined group FANCH is the same as FANCA. Fanconi anemia is a genetically heterogeneous recessive disorder characterized by cytogenetic instability, hypersensitivity to DNA crosslinking agents, increased chromosomal breakage, and defective DNA repair. The members of the Fanconi anemia complementation group do not share sequence similarity; they are related by their assembly into a common nuclear protein complex. This gene encodes the protein for complementation group G. [provided by RefSeq, Jul 2008]
PHENOTYPE: Females and males homozygous for targeted null mutations exhibit hypogonadism and reduced fertility. Cytogeneic analysis showed somatic chromosome aberrations occur at a higher spontaneous rate and are easier to induce than in normal cells. Cells are also more sensitive to mitomycin C. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 24 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam6a A T 12: 113,545,225 Y406F probably benign Het
Catsperb T A 12: 101,591,529 N786K probably benign Het
Clcnka C T 4: 141,391,401 W391* probably null Het
Col12a1 A T 9: 79,692,226 S882T probably benign Het
Cyp2j12 A G 4: 96,106,589 probably benign Het
Cyp4f17 C A 17: 32,524,875 Y342* probably null Het
Grid2 A T 6: 64,345,589 L524F probably damaging Het
Haao C T 17: 83,834,930 probably benign Het
Il17re A G 6: 113,469,599 D256G probably damaging Het
Irf4 T A 13: 30,751,784 F107L probably damaging Het
Kcnu1 A T 8: 25,865,663 I232F probably benign Het
Kmt2b T A 7: 30,586,513 probably benign Het
Maoa T C X: 16,680,846 V380A probably benign Het
Pi4ka T C 16: 17,308,144 T1121A probably benign Het
Pisd T C 5: 32,738,412 I441V probably benign Het
Pkhd1l1 A G 15: 44,586,474 T3878A probably damaging Het
Plcb2 G A 2: 118,718,889 R331W probably damaging Het
Prrc2c G A 1: 162,698,116 P307L unknown Het
Psen1 C T 12: 83,730,569 S329F probably benign Het
Ptpn21 G A 12: 98,733,601 S18F probably damaging Het
Serpinb9 A G 13: 33,006,690 T50A probably damaging Het
Tnrc6a T A 7: 123,174,278 S1148T probably damaging Het
Zfp599 G T 9: 22,249,472 Q466K possibly damaging Het
Zfp964 A G 8: 69,659,393 probably null Het
Other mutations in Fancg
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02072:Fancg APN 4 43007062 missense probably benign 0.00
IGL02184:Fancg APN 4 43006872 missense possibly damaging 0.79
IGL02989:Fancg APN 4 43007121 splice site probably benign
R0671:Fancg UTSW 4 43002998 missense probably benign 0.00
R1581:Fancg UTSW 4 43007039 missense probably damaging 1.00
R1853:Fancg UTSW 4 43009727 missense probably benign 0.00
R2046:Fancg UTSW 4 43004604 missense probably damaging 1.00
R2519:Fancg UTSW 4 43008787 missense probably damaging 1.00
R4282:Fancg UTSW 4 43003830 missense probably damaging 1.00
R4397:Fancg UTSW 4 43008897 missense probably benign 0.02
R4583:Fancg UTSW 4 43002991 missense probably benign
R4671:Fancg UTSW 4 43005272 missense probably benign 0.01
R4887:Fancg UTSW 4 43006866 missense probably benign 0.18
R5309:Fancg UTSW 4 43003019 missense probably benign 0.23
R5312:Fancg UTSW 4 43003019 missense probably benign 0.23
R5325:Fancg UTSW 4 43006564 missense probably damaging 0.99
R5379:Fancg UTSW 4 43002998 missense probably benign 0.00
R5386:Fancg UTSW 4 43007076 nonsense probably null
R5649:Fancg UTSW 4 43008736 missense probably damaging 1.00
R5788:Fancg UTSW 4 43007130 intron probably benign
R5802:Fancg UTSW 4 43006582 missense probably benign
R6217:Fancg UTSW 4 43010084 missense probably benign 0.03
R6698:Fancg UTSW 4 43007034 missense probably benign 0.00
R7092:Fancg UTSW 4 43004831 missense probably benign 0.03
R7527:Fancg UTSW 4 43010116 start gained probably benign
Posted On2015-08-05