Incidental Mutation 'R4529:Or6c1b'
| ID |
333040 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or6c1b
|
| Ensembl Gene |
ENSMUSG00000095696 |
| Gene Name |
olfactory receptor family 6 subfamily C member 1B |
| Synonyms |
MOR111-5, Olfr786, GA_x6K02T2PULF-11116958-11117896 |
| MMRRC Submission |
041592-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.066)
|
| Stock # |
R4529 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
10 |
| Chromosomal Location |
129272683-129273621 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 129273287 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 202
(V202A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000145099
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000076508]
[ENSMUST00000204529]
|
| AlphaFold |
Q8VFH8 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000076508
AA Change: V202A
PolyPhen 2
Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)
|
| SMART Domains |
Protein: ENSMUSP00000075827
Gene: ENSMUSG00000095696
AA Change: V202A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
306 |
1.9e-53 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
7.3e-20 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000204529
AA Change: V202A
PolyPhen 2
Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)
|
| SMART Domains |
Protein: ENSMUSP00000145099
Gene: ENSMUSG00000095696
AA Change: V202A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
306 |
1.9e-53 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
7.3e-20 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.6%
- 10x: 97.2%
- 20x: 95.0%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adgre1 |
A |
G |
17: 57,727,519 (GRCm39) |
Y483C |
possibly damaging |
Het |
| Akap9 |
T |
A |
5: 4,093,948 (GRCm39) |
F2157I |
probably damaging |
Het |
| Aldh1a3 |
T |
C |
7: 66,051,742 (GRCm39) |
N404D |
probably benign |
Het |
| Ankrd2 |
A |
T |
19: 42,032,240 (GRCm39) |
I231F |
probably benign |
Het |
| Apba1 |
A |
G |
19: 23,913,899 (GRCm39) |
N641D |
probably damaging |
Het |
| C1qbp |
T |
C |
11: 70,869,550 (GRCm39) |
T178A |
probably benign |
Het |
| Chtf18 |
T |
C |
17: 25,939,592 (GRCm39) |
Y64C |
probably damaging |
Het |
| Cyp1a1 |
A |
G |
9: 57,608,962 (GRCm39) |
H281R |
probably benign |
Het |
| Ehmt2 |
A |
G |
17: 35,132,707 (GRCm39) |
I1235V |
probably damaging |
Het |
| Fcamr |
A |
G |
1: 130,732,313 (GRCm39) |
H44R |
probably damaging |
Het |
| Gm12185 |
T |
C |
11: 48,798,747 (GRCm39) |
Y582C |
probably damaging |
Het |
| Gm12185 |
T |
C |
11: 48,798,921 (GRCm39) |
N524S |
possibly damaging |
Het |
| Gm5460 |
A |
C |
14: 33,767,769 (GRCm39) |
D459A |
probably damaging |
Het |
| H2-Q6 |
C |
T |
17: 35,644,820 (GRCm39) |
T203I |
probably null |
Het |
| Inmt |
T |
C |
6: 55,148,012 (GRCm39) |
M206V |
probably benign |
Het |
| Khdc3 |
T |
C |
9: 73,011,301 (GRCm39) |
S360P |
possibly damaging |
Het |
| Lin54 |
G |
A |
5: 100,594,419 (GRCm39) |
T582I |
possibly damaging |
Het |
| Ltbp1 |
T |
G |
17: 75,458,355 (GRCm39) |
V312G |
probably benign |
Het |
| Nlrp9a |
T |
C |
7: 26,270,832 (GRCm39) |
L899P |
probably damaging |
Het |
| Orc4 |
G |
A |
2: 48,827,501 (GRCm39) |
P31S |
probably benign |
Het |
| Pabir3 |
G |
A |
X: 52,382,376 (GRCm39) |
R94H |
possibly damaging |
Het |
| Pappa |
A |
G |
4: 65,149,419 (GRCm39) |
I920V |
probably benign |
Het |
| Parp1 |
T |
A |
1: 180,418,877 (GRCm39) |
V679E |
probably damaging |
Het |
| Pla2g4f |
C |
T |
2: 120,131,100 (GRCm39) |
R785Q |
probably damaging |
Het |
| Plbd1 |
T |
A |
6: 136,628,823 (GRCm39) |
I82F |
probably benign |
Het |
| Plekhm3 |
A |
G |
1: 64,976,984 (GRCm39) |
V162A |
probably benign |
Het |
| Plin4 |
A |
G |
17: 56,411,274 (GRCm39) |
L919P |
probably damaging |
Het |
| Plxna4 |
C |
T |
6: 32,473,831 (GRCm39) |
|
probably null |
Het |
| Pou3f3 |
C |
A |
1: 42,737,714 (GRCm39) |
T470K |
probably benign |
Het |
| Prss38 |
T |
C |
11: 59,264,325 (GRCm39) |
Y214C |
probably damaging |
Het |
| Retreg1 |
T |
A |
15: 25,968,600 (GRCm39) |
Y109N |
probably damaging |
Het |
| Slco1c1 |
A |
G |
6: 141,500,907 (GRCm39) |
Y413C |
probably damaging |
Het |
| Stk32a |
T |
C |
18: 43,376,044 (GRCm39) |
C38R |
possibly damaging |
Het |
| Themis |
T |
C |
10: 28,658,331 (GRCm39) |
F453L |
possibly damaging |
Het |
| Tmem38a |
C |
T |
8: 73,326,005 (GRCm39) |
P20S |
possibly damaging |
Het |
| Tubgcp3 |
G |
T |
8: 12,713,932 (GRCm39) |
L62I |
probably damaging |
Het |
| Ubqlnl |
C |
T |
7: 103,798,925 (GRCm39) |
V191M |
probably benign |
Het |
| Xpo7 |
G |
A |
14: 70,906,188 (GRCm39) |
T986M |
probably damaging |
Het |
| Zfp51 |
C |
T |
17: 21,684,998 (GRCm39) |
L538F |
probably damaging |
Het |
| Zfy1 |
A |
G |
Y: 726,511 (GRCm39) |
L418S |
possibly damaging |
Het |
|
| Other mutations in Or6c1b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02295:Or6c1b
|
APN |
10 |
129,272,903 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
IGL03027:Or6c1b
|
APN |
10 |
129,272,780 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03177:Or6c1b
|
APN |
10 |
129,272,684 (GRCm39) |
start codon destroyed |
probably null |
0.82 |
|
IGL03216:Or6c1b
|
APN |
10 |
129,272,806 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL03265:Or6c1b
|
APN |
10 |
129,272,794 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R0080:Or6c1b
|
UTSW |
10 |
129,273,140 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R0082:Or6c1b
|
UTSW |
10 |
129,273,140 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R0242:Or6c1b
|
UTSW |
10 |
129,273,217 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0242:Or6c1b
|
UTSW |
10 |
129,273,217 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0507:Or6c1b
|
UTSW |
10 |
129,273,157 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1432:Or6c1b
|
UTSW |
10 |
129,272,807 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1563:Or6c1b
|
UTSW |
10 |
129,273,580 (GRCm39) |
missense |
probably benign |
|
|
R2023:Or6c1b
|
UTSW |
10 |
129,273,451 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2142:Or6c1b
|
UTSW |
10 |
129,273,616 (GRCm39) |
missense |
probably benign |
0.14 |
|
R2279:Or6c1b
|
UTSW |
10 |
129,273,526 (GRCm39) |
missense |
probably benign |
0.07 |
|
R3412:Or6c1b
|
UTSW |
10 |
129,273,176 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4467:Or6c1b
|
UTSW |
10 |
129,272,933 (GRCm39) |
missense |
probably benign |
0.04 |
|
R4843:Or6c1b
|
UTSW |
10 |
129,273,316 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4888:Or6c1b
|
UTSW |
10 |
129,273,248 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4890:Or6c1b
|
UTSW |
10 |
129,272,948 (GRCm39) |
missense |
probably benign |
0.08 |
|
R6255:Or6c1b
|
UTSW |
10 |
129,273,557 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6362:Or6c1b
|
UTSW |
10 |
129,272,812 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6705:Or6c1b
|
UTSW |
10 |
129,272,941 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7270:Or6c1b
|
UTSW |
10 |
129,273,319 (GRCm39) |
missense |
probably benign |
|
|
R7450:Or6c1b
|
UTSW |
10 |
129,273,298 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7803:Or6c1b
|
UTSW |
10 |
129,272,800 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7856:Or6c1b
|
UTSW |
10 |
129,272,885 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8725:Or6c1b
|
UTSW |
10 |
129,273,334 (GRCm39) |
missense |
probably benign |
0.02 |
|
R8727:Or6c1b
|
UTSW |
10 |
129,273,334 (GRCm39) |
missense |
probably benign |
0.02 |
|
R8838:Or6c1b
|
UTSW |
10 |
129,273,065 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9180:Or6c1b
|
UTSW |
10 |
129,272,858 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9663:Or6c1b
|
UTSW |
10 |
129,272,929 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R9688:Or6c1b
|
UTSW |
10 |
129,272,967 (GRCm39) |
nonsense |
probably null |
|
|
X0052:Or6c1b
|
UTSW |
10 |
129,273,368 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Predicted Primers |
PCR Primer
(F):5'- AAAATGTTGGTCTTTGCCTCCTG -3'
(R):5'- GCAACTCCCTTGGTCAATGATG -3'
Sequencing Primer
(F):5'- GGCTGGTTTCTTTCCTAATCATC -3'
(R):5'- CAATGATGCTCTATCTGCTGCTGAG -3'
|
| Posted On |
2015-08-18 |
Incidental Mutation