Incidental Mutation 'R4628:Vmn2r68'
ID |
348950 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r68
|
Ensembl Gene |
ENSMUSG00000096861 |
Gene Name |
vomeronasal 2, receptor 68 |
Synonyms |
EG620697, Vmn2r68-ps |
MMRRC Submission |
041893-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.085)
|
Stock # |
R4628 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
84870726-84886912 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 84883673 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 144
(V144A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000129411
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061074]
|
AlphaFold |
L7N2B3 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000061074
AA Change: V144A
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
SMART Domains |
Protein: ENSMUSP00000129411 Gene: ENSMUSG00000096861 AA Change: V144A
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
77 |
463 |
4.5e-28 |
PFAM |
Pfam:NCD3G
|
507 |
559 |
1.1e-18 |
PFAM |
Pfam:7tm_3
|
589 |
827 |
3.7e-53 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.3%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 81 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca7 |
G |
T |
10: 79,851,022 (GRCm39) |
|
probably null |
Het |
Abcb4 |
A |
G |
5: 8,957,399 (GRCm39) |
D176G |
probably benign |
Het |
Adamts18 |
C |
T |
8: 114,499,800 (GRCm39) |
W371* |
probably null |
Het |
Akr1c13 |
G |
T |
13: 4,247,869 (GRCm39) |
V214F |
probably damaging |
Het |
Alkbh2 |
C |
T |
5: 114,262,287 (GRCm39) |
E148K |
probably damaging |
Het |
Ankrd12 |
T |
C |
17: 66,292,989 (GRCm39) |
T815A |
probably benign |
Het |
Arid3a |
T |
C |
10: 79,766,992 (GRCm39) |
S89P |
possibly damaging |
Het |
Ass1 |
A |
T |
2: 31,371,000 (GRCm39) |
D63V |
probably damaging |
Het |
Atxn3 |
T |
A |
12: 101,889,337 (GRCm39) |
|
probably benign |
Het |
Bcap29 |
C |
T |
12: 31,676,806 (GRCm39) |
S88N |
probably benign |
Het |
Bsn |
G |
T |
9: 107,990,434 (GRCm39) |
P1773T |
probably damaging |
Het |
Ccdc141 |
A |
G |
2: 76,890,024 (GRCm39) |
S423P |
probably benign |
Het |
Cfap46 |
A |
T |
7: 139,260,843 (GRCm39) |
L85Q |
probably damaging |
Het |
Chd8 |
T |
C |
14: 52,444,372 (GRCm39) |
R438G |
probably benign |
Het |
Chd9 |
T |
A |
8: 91,710,091 (GRCm39) |
M289K |
probably benign |
Het |
Col14a1 |
T |
A |
15: 55,313,229 (GRCm39) |
Y26* |
probably null |
Het |
Colec10 |
A |
G |
15: 54,323,127 (GRCm39) |
T117A |
possibly damaging |
Het |
Colq |
C |
A |
14: 31,265,979 (GRCm39) |
G178V |
probably damaging |
Het |
Defb3 |
A |
T |
8: 19,345,156 (GRCm39) |
R37S |
probably benign |
Het |
Duox1 |
A |
G |
2: 122,176,733 (GRCm39) |
Y1418C |
probably damaging |
Het |
Engase |
C |
T |
11: 118,375,731 (GRCm39) |
S33F |
probably damaging |
Het |
Erich3 |
A |
T |
3: 154,469,324 (GRCm39) |
T1259S |
probably damaging |
Het |
Fam98c |
T |
C |
7: 28,854,693 (GRCm39) |
T49A |
possibly damaging |
Het |
Fhod3 |
T |
A |
18: 25,253,186 (GRCm39) |
F1379I |
possibly damaging |
Het |
Fndc3b |
T |
C |
3: 27,610,277 (GRCm39) |
I86V |
probably benign |
Het |
Gm1123 |
A |
G |
9: 98,896,289 (GRCm39) |
V197A |
probably damaging |
Het |
Gm4847 |
A |
T |
1: 166,457,964 (GRCm39) |
V463E |
probably damaging |
Het |
Gm9772 |
T |
C |
17: 22,226,188 (GRCm39) |
K32R |
probably damaging |
Het |
Gm9804 |
T |
C |
12: 49,448,540 (GRCm39) |
S161P |
unknown |
Het |
Gpr162 |
C |
T |
6: 124,838,405 (GRCm39) |
D82N |
probably benign |
Het |
Grid2ip |
T |
C |
5: 143,368,630 (GRCm39) |
V650A |
probably damaging |
Het |
Hs1bp3 |
T |
C |
12: 8,386,357 (GRCm39) |
V253A |
probably benign |
Het |
Hsd3b6 |
T |
G |
3: 98,713,895 (GRCm39) |
K135Q |
possibly damaging |
Het |
Igfn1 |
T |
C |
1: 135,887,468 (GRCm39) |
D2532G |
possibly damaging |
Het |
Iqgap2 |
A |
G |
13: 95,899,837 (GRCm39) |
Y74H |
probably benign |
Het |
Itga2 |
A |
G |
13: 115,014,229 (GRCm39) |
V233A |
probably benign |
Het |
Kat14 |
A |
G |
2: 144,246,140 (GRCm39) |
|
probably benign |
Het |
Kctd21 |
A |
G |
7: 96,996,782 (GRCm39) |
D85G |
probably damaging |
Het |
Kera |
A |
G |
10: 97,445,493 (GRCm39) |
N284S |
probably benign |
Het |
Krt1 |
C |
T |
15: 101,754,622 (GRCm39) |
G543S |
unknown |
Het |
Lcmt1 |
T |
A |
7: 123,010,035 (GRCm39) |
C183* |
probably null |
Het |
Lcn5 |
A |
G |
2: 25,548,075 (GRCm39) |
E28G |
possibly damaging |
Het |
Leo1 |
A |
T |
9: 75,352,979 (GRCm39) |
D174V |
probably damaging |
Het |
Llgl1 |
A |
T |
11: 60,600,811 (GRCm39) |
T636S |
probably damaging |
Het |
Lrrc8e |
T |
A |
8: 4,283,981 (GRCm39) |
C69S |
probably damaging |
Het |
Maml3 |
A |
T |
3: 51,703,891 (GRCm39) |
|
probably benign |
Het |
Maz |
G |
T |
7: 126,624,519 (GRCm39) |
H334N |
possibly damaging |
Het |
Mcm6 |
T |
C |
1: 128,279,285 (GRCm39) |
D167G |
probably benign |
Het |
Mrpl24 |
A |
C |
3: 87,829,436 (GRCm39) |
|
probably null |
Het |
Myo18a |
G |
A |
11: 77,714,962 (GRCm39) |
V834M |
probably damaging |
Het |
Neb |
T |
A |
2: 52,198,362 (GRCm39) |
R461* |
probably null |
Het |
Notch4 |
C |
A |
17: 34,789,159 (GRCm39) |
T486N |
probably damaging |
Het |
Nphp3 |
A |
G |
9: 103,880,257 (GRCm39) |
E93G |
probably damaging |
Het |
Nup188 |
A |
G |
2: 30,219,358 (GRCm39) |
Y858C |
probably damaging |
Het |
Or13a17 |
T |
A |
7: 140,271,291 (GRCm39) |
S158T |
probably benign |
Het |
Or13a28 |
C |
T |
7: 140,218,297 (GRCm39) |
R228C |
probably benign |
Het |
Or1j11 |
T |
A |
2: 36,311,869 (GRCm39) |
L153* |
probably null |
Het |
Otud4 |
T |
A |
8: 80,366,597 (GRCm39) |
D21E |
possibly damaging |
Het |
Ovgp1 |
T |
A |
3: 105,887,639 (GRCm39) |
|
probably null |
Het |
Pdia3 |
A |
T |
2: 121,244,620 (GRCm39) |
N11I |
possibly damaging |
Het |
Pex5 |
T |
C |
6: 124,380,079 (GRCm39) |
D286G |
possibly damaging |
Het |
Pias3 |
T |
C |
3: 96,607,136 (GRCm39) |
I133T |
probably damaging |
Het |
Postn |
A |
G |
3: 54,279,578 (GRCm39) |
D352G |
probably damaging |
Het |
Prl7c1 |
T |
C |
13: 27,962,065 (GRCm39) |
R81G |
probably benign |
Het |
Rmi1 |
A |
G |
13: 58,556,950 (GRCm39) |
R400G |
probably benign |
Het |
Rtraf |
T |
A |
14: 19,867,155 (GRCm39) |
N116I |
probably benign |
Het |
Semp2l2a |
T |
A |
8: 13,886,625 (GRCm39) |
R489W |
probably damaging |
Het |
Slc6a12 |
T |
A |
6: 121,328,951 (GRCm39) |
C50* |
probably null |
Het |
Spring1 |
G |
C |
5: 118,397,479 (GRCm39) |
A154P |
probably damaging |
Het |
Srcin1 |
T |
A |
11: 97,439,752 (GRCm39) |
H126L |
probably benign |
Het |
Tmtc2 |
A |
T |
10: 105,139,511 (GRCm39) |
S672T |
probably benign |
Het |
Top2b |
T |
G |
14: 16,409,189 (GRCm38) |
I777M |
probably damaging |
Het |
Ube2c |
A |
G |
2: 164,614,093 (GRCm39) |
N143S |
possibly damaging |
Het |
Uroc1 |
A |
T |
6: 90,332,310 (GRCm39) |
I556F |
probably damaging |
Het |
Vmn1r124 |
T |
A |
7: 20,994,302 (GRCm39) |
K81* |
probably null |
Het |
Vmn1r57 |
T |
A |
7: 5,223,972 (GRCm39) |
C166S |
probably damaging |
Het |
Vmn2r114 |
ATTT |
ATT |
17: 23,509,906 (GRCm39) |
|
probably null |
Het |
Vmn2r85 |
C |
T |
10: 130,261,235 (GRCm39) |
M367I |
probably benign |
Het |
Vwa3a |
T |
A |
7: 120,392,598 (GRCm39) |
N812K |
probably benign |
Het |
Wdfy4 |
A |
T |
14: 32,824,515 (GRCm39) |
N1301K |
probably damaging |
Het |
Zfhx4 |
G |
A |
3: 5,468,536 (GRCm39) |
R2898H |
probably damaging |
Het |
|
Other mutations in Vmn2r68 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01391:Vmn2r68
|
APN |
7 |
84,886,819 (GRCm39) |
missense |
probably benign |
|
IGL01477:Vmn2r68
|
APN |
7 |
84,882,691 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01600:Vmn2r68
|
APN |
7 |
84,871,468 (GRCm39) |
missense |
probably benign |
0.39 |
IGL01979:Vmn2r68
|
APN |
7 |
84,871,325 (GRCm39) |
missense |
probably benign |
|
IGL01999:Vmn2r68
|
APN |
7 |
84,871,439 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02269:Vmn2r68
|
APN |
7 |
84,870,947 (GRCm39) |
missense |
possibly damaging |
0.84 |
IGL02517:Vmn2r68
|
APN |
7 |
84,871,153 (GRCm39) |
nonsense |
probably null |
|
IGL02827:Vmn2r68
|
APN |
7 |
84,886,800 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02852:Vmn2r68
|
APN |
7 |
84,882,595 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02982:Vmn2r68
|
APN |
7 |
84,883,649 (GRCm39) |
missense |
probably benign |
0.12 |
IGL03099:Vmn2r68
|
APN |
7 |
84,871,448 (GRCm39) |
nonsense |
probably null |
|
IGL03166:Vmn2r68
|
APN |
7 |
84,871,331 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03168:Vmn2r68
|
APN |
7 |
84,870,972 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03243:Vmn2r68
|
APN |
7 |
84,882,963 (GRCm39) |
missense |
possibly damaging |
0.66 |
F5770:Vmn2r68
|
UTSW |
7 |
84,871,088 (GRCm39) |
missense |
probably benign |
0.01 |
R0280:Vmn2r68
|
UTSW |
7 |
84,882,466 (GRCm39) |
critical splice donor site |
probably null |
|
R0280:Vmn2r68
|
UTSW |
7 |
84,882,457 (GRCm39) |
splice site |
probably benign |
|
R0281:Vmn2r68
|
UTSW |
7 |
84,882,466 (GRCm39) |
critical splice donor site |
probably null |
|
R0281:Vmn2r68
|
UTSW |
7 |
84,882,457 (GRCm39) |
splice site |
probably benign |
|
R0348:Vmn2r68
|
UTSW |
7 |
84,870,884 (GRCm39) |
missense |
possibly damaging |
0.50 |
R0390:Vmn2r68
|
UTSW |
7 |
84,882,466 (GRCm39) |
critical splice donor site |
probably null |
|
R0390:Vmn2r68
|
UTSW |
7 |
84,882,457 (GRCm39) |
splice site |
probably benign |
|
R0722:Vmn2r68
|
UTSW |
7 |
84,870,794 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1129:Vmn2r68
|
UTSW |
7 |
84,886,712 (GRCm39) |
splice site |
probably null |
|
R1136:Vmn2r68
|
UTSW |
7 |
84,871,549 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1319:Vmn2r68
|
UTSW |
7 |
84,881,700 (GRCm39) |
missense |
probably damaging |
0.96 |
R1614:Vmn2r68
|
UTSW |
7 |
84,870,946 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1682:Vmn2r68
|
UTSW |
7 |
84,882,574 (GRCm39) |
missense |
possibly damaging |
0.68 |
R1837:Vmn2r68
|
UTSW |
7 |
84,882,886 (GRCm39) |
missense |
probably damaging |
0.96 |
R1893:Vmn2r68
|
UTSW |
7 |
84,883,867 (GRCm39) |
nonsense |
probably null |
|
R1908:Vmn2r68
|
UTSW |
7 |
84,883,260 (GRCm39) |
missense |
probably benign |
0.09 |
R1909:Vmn2r68
|
UTSW |
7 |
84,883,260 (GRCm39) |
missense |
probably benign |
0.09 |
R1951:Vmn2r68
|
UTSW |
7 |
84,883,102 (GRCm39) |
missense |
probably damaging |
1.00 |
R2177:Vmn2r68
|
UTSW |
7 |
84,871,123 (GRCm39) |
missense |
probably benign |
0.01 |
R2178:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R2185:Vmn2r68
|
UTSW |
7 |
84,882,901 (GRCm39) |
nonsense |
probably null |
|
R2188:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R2282:Vmn2r68
|
UTSW |
7 |
84,870,859 (GRCm39) |
missense |
possibly damaging |
0.65 |
R2567:Vmn2r68
|
UTSW |
7 |
84,883,803 (GRCm39) |
missense |
probably benign |
|
R2869:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2869:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2870:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2870:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2871:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2871:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2873:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2874:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R3149:Vmn2r68
|
UTSW |
7 |
84,886,875 (GRCm39) |
missense |
probably benign |
0.00 |
R3401:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R3978:Vmn2r68
|
UTSW |
7 |
84,881,670 (GRCm39) |
missense |
probably benign |
0.00 |
R4399:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4401:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4421:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4478:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4479:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4495:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4649:Vmn2r68
|
UTSW |
7 |
84,870,743 (GRCm39) |
missense |
probably benign |
|
R4654:Vmn2r68
|
UTSW |
7 |
84,882,769 (GRCm39) |
nonsense |
probably null |
|
R4793:Vmn2r68
|
UTSW |
7 |
84,883,648 (GRCm39) |
missense |
probably benign |
0.01 |
R5007:Vmn2r68
|
UTSW |
7 |
84,881,622 (GRCm39) |
missense |
probably benign |
|
R5021:Vmn2r68
|
UTSW |
7 |
84,882,942 (GRCm39) |
missense |
possibly damaging |
0.62 |
R5082:Vmn2r68
|
UTSW |
7 |
84,883,076 (GRCm39) |
missense |
probably benign |
0.12 |
R5177:Vmn2r68
|
UTSW |
7 |
84,871,199 (GRCm39) |
missense |
probably damaging |
0.99 |
R5221:Vmn2r68
|
UTSW |
7 |
84,871,085 (GRCm39) |
missense |
probably damaging |
1.00 |
R5514:Vmn2r68
|
UTSW |
7 |
84,886,767 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5521:Vmn2r68
|
UTSW |
7 |
84,882,926 (GRCm39) |
missense |
probably benign |
0.03 |
R5563:Vmn2r68
|
UTSW |
7 |
84,871,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R5664:Vmn2r68
|
UTSW |
7 |
84,882,978 (GRCm39) |
missense |
probably benign |
0.02 |
R5829:Vmn2r68
|
UTSW |
7 |
84,886,812 (GRCm39) |
missense |
probably benign |
0.00 |
R6016:Vmn2r68
|
UTSW |
7 |
84,871,453 (GRCm39) |
missense |
probably damaging |
0.99 |
R6356:Vmn2r68
|
UTSW |
7 |
84,883,048 (GRCm39) |
missense |
possibly damaging |
0.85 |
R6413:Vmn2r68
|
UTSW |
7 |
84,870,973 (GRCm39) |
missense |
probably damaging |
1.00 |
R6418:Vmn2r68
|
UTSW |
7 |
84,882,915 (GRCm39) |
missense |
probably benign |
|
R6699:Vmn2r68
|
UTSW |
7 |
84,881,583 (GRCm39) |
missense |
possibly damaging |
0.58 |
R7287:Vmn2r68
|
UTSW |
7 |
84,871,460 (GRCm39) |
missense |
probably benign |
0.33 |
R7319:Vmn2r68
|
UTSW |
7 |
84,883,042 (GRCm39) |
missense |
probably benign |
|
R7374:Vmn2r68
|
UTSW |
7 |
84,881,607 (GRCm39) |
missense |
possibly damaging |
0.66 |
R7585:Vmn2r68
|
UTSW |
7 |
84,881,587 (GRCm39) |
missense |
probably damaging |
1.00 |
R7605:Vmn2r68
|
UTSW |
7 |
84,883,116 (GRCm39) |
missense |
probably benign |
0.01 |
R7892:Vmn2r68
|
UTSW |
7 |
84,883,722 (GRCm39) |
missense |
probably benign |
|
R7979:Vmn2r68
|
UTSW |
7 |
84,883,625 (GRCm39) |
critical splice donor site |
probably null |
|
R8177:Vmn2r68
|
UTSW |
7 |
84,871,422 (GRCm39) |
nonsense |
probably null |
|
R8349:Vmn2r68
|
UTSW |
7 |
84,882,785 (GRCm39) |
missense |
probably damaging |
1.00 |
R8378:Vmn2r68
|
UTSW |
7 |
84,871,108 (GRCm39) |
missense |
probably benign |
0.00 |
R8397:Vmn2r68
|
UTSW |
7 |
84,886,722 (GRCm39) |
missense |
possibly damaging |
0.71 |
R8449:Vmn2r68
|
UTSW |
7 |
84,882,785 (GRCm39) |
missense |
probably damaging |
1.00 |
R8543:Vmn2r68
|
UTSW |
7 |
84,883,648 (GRCm39) |
missense |
probably benign |
0.01 |
R8680:Vmn2r68
|
UTSW |
7 |
84,871,321 (GRCm39) |
missense |
possibly damaging |
0.68 |
R9056:Vmn2r68
|
UTSW |
7 |
84,871,420 (GRCm39) |
missense |
possibly damaging |
0.71 |
R9342:Vmn2r68
|
UTSW |
7 |
84,882,993 (GRCm39) |
missense |
probably benign |
0.39 |
R9734:Vmn2r68
|
UTSW |
7 |
84,882,757 (GRCm39) |
missense |
possibly damaging |
0.54 |
V7581:Vmn2r68
|
UTSW |
7 |
84,871,088 (GRCm39) |
missense |
probably benign |
0.01 |
Z1176:Vmn2r68
|
UTSW |
7 |
84,871,289 (GRCm39) |
missense |
probably benign |
0.27 |
Z1176:Vmn2r68
|
UTSW |
7 |
84,870,941 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Vmn2r68
|
UTSW |
7 |
84,871,307 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
Predicted Primers |
PCR Primer
(F):5'- AATGCTGCTGCCTCCCATAC -3'
(R):5'- CCAAGACCAACCATTTGATTTTCTCTG -3'
Sequencing Primer
(F):5'- GCCTCCCATACCCATTTATGATAAAG -3'
(R):5'- CTCTGTTTATCTTGCCTTGGATG -3'
|
Posted On |
2015-10-08 |