Mutagenetix > Incidental Mutation

Incidental Mutation 'R4647:Bbs10'

350396

Institutional Source

Beutler Lab

Gene Symbol

Bbs10

Ensembl Gene

ENSMUSG00000035759

Gene Name

Bardet-Biedl syndrome 10

Synonyms

1300007O09Rik

MMRRC Submission

041908-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R4647 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

111134540-111137588 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 111136995 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Glutamic Acid at position 703 (K703E)

Ref Sequence

ENSEMBL: ENSMUSP00000049387 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000040454] [ENSMUST00000105275]

AlphaFold

Q9DBI2

Predicted Effect

probably benign
Transcript: ENSMUST00000040454
AA Change: K703E

PolyPhen 2 Score 0.016 (Sensitivity: 0.95; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000049387
Gene: ENSMUSG00000035759
AA Change: K703E

Domain	Start	End	E-Value	Type
Pfam:Cpn60_TCP1	17	103	3.6e-15	PFAM
Pfam:Cpn60_TCP1	139	427	1.1e-7	PFAM
SCOP:d1a6da1	567	695	3e-14	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000105275

SMART Domains

Protein: ENSMUSP00000100911
Gene: ENSMUSG00000020189

Domain	Start	End	E-Value	Type
low complexity region	85	101	N/A	INTRINSIC
coiled coil region	113	144	N/A	INTRINSIC
PH	149	267	3.65e-16	SMART
Pfam:Oxysterol_BP	406	752	4.6e-91	PFAM
coiled coil region	831	853	N/A	INTRINSIC
transmembrane domain	871	888	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000219990

Meta Mutation Damage Score

0.0595

Coding Region Coverage

1x: 99.3%
3x: 98.6%
10x: 97.3%
20x: 95.4%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the Bardet-Biedl syndrome (BBS) gene family. Bardet-Biedl syndrome is an autosomal recessive disorder characterized by progressive retinal degeneration, obesity, polydactyly, renal malformation and mental retardation. The proteins encoded by BBS gene family members are structurally diverse and the similar phenotypes exhibited by mutations in BBS gene family members is likely due to their shared roles in cilia formation and function. Many BBS proteins localize to the basal bodies, ciliary axonemes, and pericentriolar regions of cells. BBS proteins may also be involved in intracellular trafficking via microtubule-related transport. The protein encoded by this gene is likely not a ciliary protein but rather has distant sequence homology to type II chaperonins. As a molecular chaperone, this protein may affect the folding or stability of other ciliary or basal body proteins. Inhibition of this protein's expression impairs ciliogenesis in preadipocytes. Mutations in this gene cause Bardet-Biedl syndrome type 10. [provided by RefSeq, Jan 2010]
PHENOTYPE: Mice homozygous for a knock-out allele develop obesity, hyperleptinemia, retinal degeneration, structural defects in renal glomeruli, microalbuminuria, polyuria, increased circulating antidiuretic hormone levels, and vacuolated renal epithelial cells. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 139 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700031F05Rik	G	T	X: 101,904,515 (GRCm39)	N132K	possibly damaging	Het
Aatf	T	C	11: 84,362,023 (GRCm39)	D313G	possibly damaging	Het
Abcb11	T	G	2: 69,115,615 (GRCm39)	D583A	probably damaging	Het
Adgrv1	A	T	13: 81,676,914 (GRCm39)	Y1252*	probably null	Het
Aim2	T	C	1: 173,283,090 (GRCm39)		silent	Het
Angpt1	T	A	15: 42,539,580 (GRCm39)	Y93F	probably benign	Het
Ankrd27	C	T	7: 35,337,659 (GRCm39)	P991L	probably benign	Het
Ap1s3	C	T	1: 79,591,920 (GRCm39)		probably null	Het
Apbb1	A	C	7: 105,214,745 (GRCm39)	S500A	probably benign	Het
Arc	G	A	15: 74,543,374 (GRCm39)	A283V	probably damaging	Het
C1galt1c1	A	T	X: 37,720,349 (GRCm39)	S216T	probably benign	Het
C1qtnf4	T	A	2: 90,719,996 (GRCm39)	S90T	probably damaging	Het
Cachd1	A	T	4: 100,810,327 (GRCm39)	K310*	probably null	Het
Calhm1	A	G	19: 47,132,240 (GRCm39)	L125P	probably damaging	Het
Carmil1	G	A	13: 24,321,162 (GRCm39)	L278F	probably damaging	Het
Ccar1	A	T	10: 62,583,196 (GRCm39)	Y972*	probably null	Het
Cd163	C	T	6: 124,297,580 (GRCm39)	P909S	probably damaging	Het
Cd44	T	A	2: 102,668,274 (GRCm39)	H268L	possibly damaging	Het
Cdkl2	A	T	5: 92,165,072 (GRCm39)	L517Q	probably damaging	Het
Cep68	G	T	11: 20,189,349 (GRCm39)	N554K	probably benign	Het
Ces1d	A	G	8: 93,893,038 (GRCm39)	W515R	probably damaging	Het
Clca4b	A	C	3: 144,634,286 (GRCm39)	H102Q	probably benign	Het
Cldn15	T	A	5: 137,003,337 (GRCm39)	I142N	probably damaging	Het
Cmklr1	T	A	5: 113,752,701 (GRCm39)	D100V	probably damaging	Het
Crocc2	G	A	1: 93,096,516 (GRCm39)	V24M	possibly damaging	Het
D430041D05Rik	G	A	2: 104,088,788 (GRCm39)	P63S	probably damaging	Het
Ddx39a	A	T	8: 84,448,902 (GRCm39)	H259L	probably benign	Het
Dhx16	C	G	17: 36,196,527 (GRCm39)	A565G	probably benign	Het
Dimt1	A	T	13: 107,084,163 (GRCm39)	D50V	probably benign	Het
Dock9	A	T	14: 121,823,658 (GRCm39)	L1428H	probably damaging	Het
Dpp4	G	T	2: 62,164,949 (GRCm39)	T700K	probably damaging	Het
E030030I06Rik	T	A	10: 22,024,744 (GRCm39)	R56S	unknown	Het
Eea1	A	G	10: 95,864,255 (GRCm39)	T925A	probably benign	Het
Ext1	A	G	15: 52,953,383 (GRCm39)	S494P	possibly damaging	Het
Fam171a1	G	A	2: 3,221,328 (GRCm39)	E140K	probably damaging	Het
Fgfr3	C	T	5: 33,892,330 (GRCm39)		probably benign	Het
Gabra6	A	G	11: 42,198,199 (GRCm39)	I407T	probably damaging	Het
Gm16223	C	A	5: 42,371,954 (GRCm39)	L115M	unknown	Het
Gm4781	G	T	10: 100,232,862 (GRCm39)		noncoding transcript	Het
Gm9772	T	A	17: 22,226,013 (GRCm39)	I70F	possibly damaging	Het
Gpr107	T	A	2: 31,100,513 (GRCm39)	F497Y	probably damaging	Het
Grm7	T	A	6: 110,891,344 (GRCm39)	Y192*	probably null	Het
Gtf2ird2	G	A	5: 134,245,034 (GRCm39)	A431T	probably damaging	Het
H2-K2	T	A	17: 34,194,989 (GRCm39)		noncoding transcript	Het
H2-M11	T	A	17: 36,858,883 (GRCm39)	V141D	probably benign	Het
Hmcn1	A	G	1: 150,551,262 (GRCm39)		probably null	Het
Hmcn2	A	T	2: 31,289,031 (GRCm39)	Q2280L	possibly damaging	Het
Hmg20b	T	A	10: 81,184,416 (GRCm39)	Q129L	probably damaging	Het
Igfbp7	T	A	5: 77,499,143 (GRCm39)	Q285L	possibly damaging	Het
Igkv13-85	T	A	6: 68,907,720 (GRCm39)		probably benign	Het
Inpp5e	A	T	2: 26,297,926 (GRCm39)	L225H	probably benign	Het
Inpp5f	T	A	7: 128,260,833 (GRCm39)	V91E	possibly damaging	Het
Khdc3	A	G	9: 73,009,868 (GRCm39)	E26G	possibly damaging	Het
Klra5	T	A	6: 129,876,339 (GRCm39)	D156V	probably damaging	Het
Kmo	C	A	1: 175,487,340 (GRCm39)	Y430*	probably null	Het
Lbx2	A	G	6: 83,065,027 (GRCm39)	D188G	probably damaging	Het
Lcorl	A	T	5: 45,890,931 (GRCm39)	L474*	probably null	Het
Lnx1	C	T	5: 74,771,457 (GRCm39)	V350I	probably benign	Het
Lrrc45	T	A	11: 120,609,947 (GRCm39)	S464T	probably benign	Het
Ltc4s	T	A	11: 50,128,052 (GRCm39)	T61S	probably benign	Het
Luc7l3	A	C	11: 94,200,467 (GRCm39)	N50K	probably damaging	Het
Ly75	G	A	2: 60,138,622 (GRCm39)	T1415M	probably damaging	Het
Macf1	T	C	4: 123,367,420 (GRCm39)	E2447G	probably benign	Het
Map3k21	A	G	8: 126,668,850 (GRCm39)	D812G	probably benign	Het
Mbtd1	C	T	11: 93,815,437 (GRCm39)	H342Y	probably damaging	Het
Mest	C	T	6: 30,745,109 (GRCm39)	R226*	probably null	Het
Mindy1	A	T	3: 95,190,054 (GRCm39)		probably benign	Het
Mmp13	A	T	9: 7,274,233 (GRCm39)	D180V	probably damaging	Het
Mn1	A	G	5: 111,567,949 (GRCm39)	T640A	probably benign	Het
Msi2	T	C	11: 88,608,864 (GRCm39)	H18R	possibly damaging	Het
Myo18a	T	A	11: 77,708,776 (GRCm39)	V61E	probably damaging	Het
Myo19	T	G	11: 84,785,468 (GRCm39)	I237S	probably damaging	Het
Ncaph2	T	A	15: 89,254,635 (GRCm39)	L416Q	probably damaging	Het
Nlrp1a	T	A	11: 70,987,952 (GRCm39)		probably null	Het
Or1n1b	A	G	2: 36,780,663 (GRCm39)	F66L	probably benign	Het
Or2d4	A	T	7: 106,543,547 (GRCm39)	N220K	probably benign	Het
Or51a25	A	G	7: 102,373,299 (GRCm39)	S133P	probably damaging	Het
Or5b98	A	G	19: 12,931,441 (GRCm39)	I163V	probably benign	Het
Or8s10	G	T	15: 98,335,457 (GRCm39)	V36F	probably benign	Het
Padi2	T	C	4: 140,671,757 (GRCm39)	F495S	probably damaging	Het
Pan3	G	T	5: 147,464,013 (GRCm39)	D535Y	probably damaging	Het
Paqr3	T	A	5: 97,256,069 (GRCm39)	R102*	probably null	Het
Patl1	T	A	19: 11,891,798 (GRCm39)	D34E	probably damaging	Het
Pcdha6	A	T	18: 37,102,189 (GRCm39)	T461S	probably damaging	Het
Pcnt	T	C	10: 76,190,047 (GRCm39)	S2830G	probably benign	Het
Pdgfa	G	A	5: 138,964,939 (GRCm39)	T181I	probably benign	Het
Pds5a	C	A	5: 65,813,661 (GRCm39)	D275Y	probably damaging	Het
Plod2	T	A	9: 92,487,503 (GRCm39)	Y607*	probably null	Het
Pomt2	G	T	12: 87,164,857 (GRCm39)	T517K	possibly damaging	Het
Pramel23	T	C	4: 143,425,914 (GRCm39)	M10V	probably benign	Het
Prdm1	T	C	10: 44,315,686 (GRCm39)	T817A	probably damaging	Het
Prdm2	T	C	4: 142,859,525 (GRCm39)	D1255G	possibly damaging	Het
Prex2	T	A	1: 11,232,509 (GRCm39)	C859S	probably damaging	Het
Ralgapa2	A	T	2: 146,229,549 (GRCm39)	M1077K	possibly damaging	Het
Ralgds	T	C	2: 28,435,532 (GRCm39)		probably null	Het
Rasa3	T	C	8: 13,638,865 (GRCm39)	E314G	probably null	Het
Rasa4	T	A	5: 136,130,217 (GRCm39)	D324E	probably damaging	Het
Rbm46	A	T	3: 82,771,765 (GRCm39)	D283E	probably benign	Het
Rnf139	A	T	15: 58,771,836 (GRCm39)	L620F	probably benign	Het
Rptor	T	A	11: 119,781,989 (GRCm39)	N1105K	probably benign	Het
Scaf11	A	T	15: 96,317,981 (GRCm39)		probably null	Het
Sectm1b	A	T	11: 120,946,760 (GRCm39)	V45E	probably damaging	Het
Selenon	A	G	4: 134,272,968 (GRCm39)	W157R	probably damaging	Het
Sema3b	C	A	9: 107,476,250 (GRCm39)	R657L	possibly damaging	Het
Setd1b	C	T	5: 123,286,175 (GRCm39)	A407V	unknown	Het
Sh3tc1	C	T	5: 35,863,662 (GRCm39)	A842T	probably damaging	Het
Shank2	A	G	7: 143,965,566 (GRCm39)	E1268G	probably damaging	Het
Shmt1	G	A	11: 60,692,291 (GRCm39)	S155F	probably damaging	Het
Sim2	A	G	16: 93,924,385 (GRCm39)	E510G	possibly damaging	Het
Slc25a46	A	T	18: 31,733,245 (GRCm39)	I168N	probably damaging	Het
Slc26a4	T	G	12: 31,590,525 (GRCm39)	D376A	possibly damaging	Het
Slfn14	G	T	11: 83,167,484 (GRCm39)	A677E	probably benign	Het
Slk	G	T	19: 47,608,713 (GRCm39)	Q555H	possibly damaging	Het
Synj1	A	T	16: 90,770,877 (GRCm39)	D517E	probably damaging	Het
Syvn1	G	A	19: 6,101,504 (GRCm39)	R440Q	probably benign	Het
Tafa5	T	G	15: 87,604,783 (GRCm39)	S115A	probably damaging	Het
Tas2r118	A	T	6: 23,969,467 (GRCm39)	I198N	probably damaging	Het
Tdh	A	G	14: 63,731,205 (GRCm39)	L323P	possibly damaging	Het
Tet2	A	T	3: 133,193,843 (GRCm39)	M197K	probably benign	Het
Timeless	A	G	10: 128,075,825 (GRCm39)	Y19C	possibly damaging	Het
Tnn	T	C	1: 159,973,612 (GRCm39)	M252V	probably benign	Het
Trdn	G	T	10: 33,071,977 (GRCm39)	E215*	probably null	Het
Trmt1l	G	T	1: 151,333,632 (GRCm39)	V712F	possibly damaging	Het
Tti1	T	C	2: 157,848,940 (GRCm39)		probably benign	Het
Ulk4	T	C	9: 120,970,918 (GRCm39)	H1018R	probably benign	Het
Vim	A	T	2: 13,587,306 (GRCm39)	H461L	probably benign	Het
Vmn2r118	T	A	17: 55,917,665 (GRCm39)	E282D	probably damaging	Het
Vmn2r31	T	A	7: 7,387,367 (GRCm39)	I735F	probably damaging	Het
Vmn2r88	A	G	14: 51,656,250 (GRCm39)	M829V	probably benign	Het
Washc4	T	A	10: 83,410,407 (GRCm39)	M665K	possibly damaging	Het
Wbp2	T	A	11: 115,973,207 (GRCm39)	M67L	probably benign	Het
Wdr81	T	A	11: 75,336,814 (GRCm39)	E1525V	probably damaging	Het
Xbp1	A	G	11: 5,472,006 (GRCm39)	D44G	probably damaging	Het
Zfhx4	T	G	3: 5,464,341 (GRCm39)	F1500V	probably damaging	Het
Zfp286	A	C	11: 62,674,559 (GRCm39)	Y95*	probably null	Het
Zfp872	A	G	9: 22,111,057 (GRCm39)	T178A	possibly damaging	Het
Zkscan5	A	G	5: 145,155,640 (GRCm39)	H364R	possibly damaging	Het
Zp3r	A	T	1: 130,505,697 (GRCm39)	Y422N	probably damaging	Het
Zscan10	C	T	17: 23,829,314 (GRCm39)	R542C	probably benign	Het

Other mutations in Bbs10

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
chalky	UTSW	10	111,135,622 (GRCm39)	missense	probably damaging	1.00
wampum	UTSW	10	111,135,874 (GRCm39)	missense	probably damaging	1.00
R0097:Bbs10	UTSW	10	111,134,705 (GRCm39)	missense	probably damaging	1.00
R0117:Bbs10	UTSW	10	111,135,194 (GRCm39)	missense	possibly damaging	0.94
R0189:Bbs10	UTSW	10	111,136,926 (GRCm39)	missense	probably damaging	1.00
R0373:Bbs10	UTSW	10	111,135,913 (GRCm39)	missense	probably damaging	1.00
R0761:Bbs10	UTSW	10	111,135,244 (GRCm39)	missense	probably damaging	1.00
R1319:Bbs10	UTSW	10	111,134,735 (GRCm39)	missense	probably damaging	1.00
R1986:Bbs10	UTSW	10	111,135,118 (GRCm39)	missense	probably damaging	1.00
R2015:Bbs10	UTSW	10	111,136,716 (GRCm39)	nonsense	probably null
R2361:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R3716:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R3717:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4407:Bbs10	UTSW	10	111,135,720 (GRCm39)	missense	probably benign	0.00
R4583:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4607:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4607:Bbs10	UTSW	10	111,136,681 (GRCm39)	missense	probably damaging	0.99
R4608:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4608:Bbs10	UTSW	10	111,136,681 (GRCm39)	missense	probably damaging	0.99
R4609:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4646:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4648:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4730:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4822:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R4832:Bbs10	UTSW	10	111,136,995 (GRCm39)	missense	probably benign	0.02
R5056:Bbs10	UTSW	10	111,136,401 (GRCm39)	missense	probably benign	0.00
R6285:Bbs10	UTSW	10	111,135,622 (GRCm39)	missense	probably damaging	1.00
R6604:Bbs10	UTSW	10	111,136,965 (GRCm39)	missense	possibly damaging	0.51
R7120:Bbs10	UTSW	10	111,135,310 (GRCm39)	missense	possibly damaging	0.74
R7174:Bbs10	UTSW	10	111,136,628 (GRCm39)	nonsense	probably null
R7376:Bbs10	UTSW	10	111,135,111 (GRCm39)	missense	probably benign	0.08
R7701:Bbs10	UTSW	10	111,135,874 (GRCm39)	missense	probably damaging	1.00
R8146:Bbs10	UTSW	10	111,136,396 (GRCm39)	missense	probably benign	0.05
R8260:Bbs10	UTSW	10	111,136,104 (GRCm39)	nonsense	probably null
R8832:Bbs10	UTSW	10	111,136,266 (GRCm39)	nonsense	probably null
R9656:Bbs10	UTSW	10	111,135,545 (GRCm39)	missense	probably benign	0.08
Z1176:Bbs10	UTSW	10	111,136,985 (GRCm39)	missense	probably damaging	1.00
Z1176:Bbs10	UTSW	10	111,135,518 (GRCm39)	missense	probably benign	0.26
Z1176:Bbs10	UTSW	10	111,134,769 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- ATATACATGCGGTCTCTCCATG -3'
(R):5'- GACTTCAGTCAGCCAGAAGC -3'

Sequencing Primer
(F):5'- GGTCTCTCCATGCACTGCAAG -3'
(R):5'- GTCTGCGAACATGTGTGTACAAC -3'

Posted On

2015-10-08