Mutagenetix > Incidental Mutation

Incidental Mutation 'R4664:Tedc2'

353137

Institutional Source

Beutler Lab

Gene Symbol

Tedc2

Ensembl Gene

ENSMUSG00000024118

Gene Name

tubulin epsilon and delta complex 2

Synonyms

1600002H07Rik

MMRRC Submission

041922-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.823) question?

Stock #

R4664 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

24434028-24439825 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to G at 24439114 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s): [ENSMUST00000024930] [ENSMUST00000115390]

AlphaFold

Q6GQV0

Predicted Effect

probably benign
Transcript: ENSMUST00000024930

SMART Domains

Protein: ENSMUSP00000024930
Gene: ENSMUSG00000024118

Domain	Start	End	E-Value	Type
low complexity region	32	49	N/A	INTRINSIC
low complexity region	78	84	N/A	INTRINSIC
low complexity region	111	131	N/A	INTRINSIC
Pfam:DUF4693	150	434	8.6e-145	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000115390

SMART Domains

Protein: ENSMUSP00000111048
Gene: ENSMUSG00000072082

Domain	Start	End	E-Value	Type
FBOX	35	75	1.56e-6	SMART
CYCLIN	315	399	2.25e-13	SMART
Cyclin_C	408	531	2.58e-19	SMART
CYCLIN	416	494	2.27e-9	SMART
low complexity region	545	555	N/A	INTRINSIC
low complexity region	563	574	N/A	INTRINSIC
low complexity region	695	708	N/A	INTRINSIC
low complexity region	719	731	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000124557

SMART Domains

Protein: ENSMUSP00000119405
Gene: ENSMUSG00000024118

Domain	Start	End	E-Value	Type
low complexity region	16	32	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000137648

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000137883

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138818

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000148704

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000149916

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000171563

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.2%
20x: 95.2%

Validation Efficiency

96% (110/115)

Allele List at MGI

Other mutations in this stock

Total: 106 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ano2	A	G	6: 125,840,501 (GRCm39)	I391V	probably benign	Het
Apc	T	A	18: 34,431,647 (GRCm39)	L349M	probably damaging	Het
Atmin	A	G	8: 117,684,698 (GRCm39)	D786G	probably damaging	Het
Atp8a1	T	A	5: 67,919,929 (GRCm39)	D379V	possibly damaging	Het
Aurkb	A	G	11: 68,939,435 (GRCm39)	K173E	probably damaging	Het
Bak1	T	C	17: 27,241,510 (GRCm39)	I83V	possibly damaging	Het
Btbd17	A	C	11: 114,684,832 (GRCm39)	V69G	probably damaging	Het
Cacna1a	T	A	8: 85,328,396 (GRCm39)	Y1597*	probably null	Het
Camk2a	C	A	18: 61,088,696 (GRCm39)	Q167K	possibly damaging	Het
Capn1	A	T	19: 6,061,045 (GRCm39)	N253K	probably benign	Het
Ccer2	A	G	7: 28,455,928 (GRCm39)	E40G	probably benign	Het
Cdc42bpa	A	G	1: 179,972,130 (GRCm39)	T527A	probably damaging	Het
Cdkl2	T	C	5: 92,185,124 (GRCm39)	D89G	probably damaging	Het
Cep128	G	T	12: 91,263,027 (GRCm39)	R291S	probably damaging	Het
Cert1	T	C	13: 96,735,965 (GRCm39)	V175A	probably benign	Het
Chd4	A	G	6: 125,078,465 (GRCm39)	M203V	possibly damaging	Het
Chrna4	A	G	2: 180,679,286 (GRCm39)	S54P	probably damaging	Het
Cic	TGTTGCCCTC	T	7: 24,990,099 (GRCm39)		probably benign	Het
Cntn5	T	A	9: 10,144,214 (GRCm39)	I152L	possibly damaging	Het
Cntn6	A	G	6: 104,705,245 (GRCm39)	E154G	probably benign	Het
Col16a1	A	C	4: 129,955,883 (GRCm39)		probably benign	Het
Cpvl	C	T	6: 53,908,918 (GRCm39)	E282K	probably benign	Het
Cyth2	T	C	7: 45,460,143 (GRCm39)	D183G	probably damaging	Het
Ddx47	A	T	6: 134,989,319 (GRCm39)	T48S	possibly damaging	Het
Dgkk	A	G	X: 6,794,751 (GRCm39)	D685G	probably benign	Het
Dis3l	C	T	9: 64,238,080 (GRCm39)	S29N	unknown	Het
Dlg5	T	C	14: 24,187,249 (GRCm39)	H1834R	possibly damaging	Het
Dnah10	T	C	5: 124,905,536 (GRCm39)	M4060T	possibly damaging	Het
Dock3	T	A	9: 106,870,743 (GRCm39)	N557I	possibly damaging	Het
Dync2i1	T	C	12: 116,219,831 (GRCm39)	E37G	probably damaging	Het
Eprs1	A	T	1: 185,105,273 (GRCm39)		probably benign	Het
Faim2	C	A	15: 99,422,581 (GRCm39)		probably null	Het
Faim2	T	G	15: 99,422,582 (GRCm39)	S72R	probably benign	Het
Fanca	T	C	8: 123,995,711 (GRCm39)	T1364A	probably damaging	Het
Fance	T	C	17: 28,534,636 (GRCm39)		probably benign	Het
Farsb	A	T	1: 78,420,402 (GRCm39)	H496Q	possibly damaging	Het
Fryl	C	T	5: 73,248,022 (GRCm39)	E1032K	possibly damaging	Het
Galnt14	A	T	17: 73,814,808 (GRCm39)		probably benign	Het
Gba2	A	T	4: 43,568,619 (GRCm39)		probably benign	Het
Gjb4	C	A	4: 127,245,571 (GRCm39)	K123N	probably damaging	Het
Gmcl1	G	A	6: 86,709,980 (GRCm39)	T56I	probably benign	Het
Gtf2ird1	T	A	5: 134,412,756 (GRCm39)	E55V	probably damaging	Het
Gtpbp2	T	C	17: 46,472,080 (GRCm39)	V5A	probably benign	Het
Hnrnpr	A	G	4: 136,044,486 (GRCm39)		probably benign	Het
Homer3	G	A	8: 70,742,793 (GRCm39)		probably null	Het
Hsd3b3	T	C	3: 98,649,532 (GRCm39)	S264G	probably damaging	Het
Ints8	T	C	4: 11,227,152 (GRCm39)	M574V	probably benign	Het
Kif4-ps	G	A	12: 101,115,477 (GRCm39)		noncoding transcript	Het
Klhl14	A	T	18: 21,687,765 (GRCm39)	N552K	probably benign	Het
Klhl40	A	G	9: 121,609,799 (GRCm39)	E528G	probably damaging	Het
Lactb2	T	C	1: 13,717,624 (GRCm39)	E133G	probably damaging	Het
Lratd2	A	T	15: 60,695,478 (GRCm39)	D89E	probably benign	Het
Lrrtm2	T	C	18: 35,347,310 (GRCm39)		probably null	Het
Mab21l2	T	A	3: 86,454,811 (GRCm39)	Y63F	probably benign	Het
Mbd1	T	A	18: 74,402,597 (GRCm39)	I33N	possibly damaging	Het
Mertk	G	A	2: 128,643,132 (GRCm39)	V844M	probably benign	Het
Myh11	T	C	16: 14,044,448 (GRCm39)	T652A	possibly damaging	Het
Nlrp4a	C	A	7: 26,148,943 (GRCm39)	Y183*	probably null	Het
Noa1	T	A	5: 77,447,600 (GRCm39)	T558S	probably benign	Het
Nol11	A	T	11: 107,071,826 (GRCm39)	S256T	possibly damaging	Het
Nr1d1	G	T	11: 98,662,086 (GRCm39)	R183S	possibly damaging	Het
Nrg2	G	T	18: 36,185,948 (GRCm39)	Q264K	possibly damaging	Het
Nsd3	T	A	8: 26,188,894 (GRCm39)	F1027I	probably damaging	Het
Ntrk3	T	A	7: 78,110,847 (GRCm39)	I285F	probably damaging	Het
Obox8	T	C	7: 14,066,771 (GRCm39)	N91S	possibly damaging	Het
Oga	T	C	19: 45,760,384 (GRCm39)	E258G	probably benign	Het
Orc5	C	T	5: 22,751,520 (GRCm39)	S63N	probably benign	Het
Osbpl6	C	T	2: 76,398,552 (GRCm39)	T412I	probably benign	Het
P2ry14	C	T	3: 59,022,563 (GRCm39)	C308Y	probably damaging	Het
Pacsin1	T	C	17: 27,926,038 (GRCm39)	F127L	probably damaging	Het
Pex11b	T	C	3: 96,551,151 (GRCm39)	L198P	possibly damaging	Het
Pla2g4e	A	T	2: 120,001,669 (GRCm39)	V660E	probably damaging	Het
Plxna4	C	A	6: 32,493,885 (GRCm39)	V244F	possibly damaging	Het
Polr3b	A	G	10: 84,550,233 (GRCm39)	Y981C	probably damaging	Het
Popdc2	T	A	16: 38,194,649 (GRCm39)	S357T	probably damaging	Het
Prr29	A	G	11: 106,267,159 (GRCm39)	H58R	probably damaging	Het
Pyy	T	A	11: 101,998,178 (GRCm39)	M1L	possibly damaging	Het
Rasd2	T	C	8: 75,948,556 (GRCm39)	S161P	possibly damaging	Het
Ryr3	C	T	2: 112,826,900 (GRCm39)		probably benign	Het
Sectm1a	G	A	11: 120,960,552 (GRCm39)	R88C	possibly damaging	Het
Serpinb13	C	T	1: 106,910,574 (GRCm39)	S66L	probably damaging	Het
Siglecf	A	T	7: 43,005,837 (GRCm39)	I465F	possibly damaging	Het
Sorl1	A	T	9: 41,915,347 (GRCm39)	M1294K	probably damaging	Het
Spam1	A	T	6: 24,796,661 (GRCm39)	H204L	probably benign	Het
Sspo	A	T	6: 48,450,468 (GRCm39)	N2586Y	possibly damaging	Het
Tbc1d4	A	G	14: 101,700,263 (GRCm39)		probably benign	Het
Tceanc2	A	T	4: 107,022,757 (GRCm39)	S77T	probably damaging	Het
Tgm6	A	G	2: 129,979,314 (GRCm39)	D148G	probably benign	Het
Tgm6	A	T	2: 129,983,128 (GRCm39)	Q239L	probably benign	Het
Thsd7a	T	A	6: 12,337,313 (GRCm39)	T1235S	possibly damaging	Het
Thsd7a	T	A	6: 12,504,012 (GRCm39)	I381F	possibly damaging	Het
Tmc4	T	C	7: 3,674,270 (GRCm39)		probably null	Het
Tmem54	A	T	4: 129,004,704 (GRCm39)	E186D	possibly damaging	Het
Tpk1	A	T	6: 43,588,269 (GRCm39)	F32I	probably benign	Het
Trpc4ap	A	G	2: 155,514,917 (GRCm39)	I97T	probably benign	Het
Tut7	G	A	13: 59,948,413 (GRCm39)	T636I	possibly damaging	Het
Txlnb	A	G	10: 17,718,942 (GRCm39)	E591G	probably damaging	Het
Tyk2	C	T	9: 21,025,503 (GRCm39)	A741T	probably damaging	Het
Ubr4	G	A	4: 139,133,829 (GRCm39)	E742K	possibly damaging	Het
Uckl1	A	T	2: 181,216,661 (GRCm39)	S95T	possibly damaging	Het
Uevld	T	A	7: 46,587,734 (GRCm39)	D322V	probably damaging	Het
Ugt1a1	CAGAGAGAGAGAGA	CAGAGAGAGAGA	1: 88,139,706 (GRCm39)		probably benign	Het
Vmn1r238	G	T	18: 3,123,300 (GRCm39)	T38K	probably damaging	Het
Vps8	T	A	16: 21,262,938 (GRCm39)		probably null	Het
Wdr83	T	C	8: 85,806,680 (GRCm39)		probably benign	Het
Zfp619	A	G	7: 39,183,559 (GRCm39)	T51A	probably benign	Het

Other mutations in Tedc2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01963:Tedc2	APN	17	24,436,926 (GRCm39)	missense	probably benign	0.01
IGL02111:Tedc2	APN	17	24,437,140 (GRCm39)	splice site	probably benign
IGL02347:Tedc2	APN	17	24,439,584 (GRCm39)	missense	probably damaging	1.00
IGL03400:Tedc2	APN	17	24,438,777 (GRCm39)	missense	probably benign
R0766:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R0766:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1066:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1066:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1067:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1067:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1085:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1085:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1086:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1086:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1136:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1136:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1137:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1137:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1203:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1203:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1345:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1345:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1385:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1385:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1396:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1396:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1888:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1888:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1888:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1888:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1891:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1891:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1943:Tedc2	UTSW	17	24,436,923 (GRCm39)	missense	possibly damaging	0.90
R1984:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1984:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1985:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1985:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R1986:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R1986:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R2026:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R2026:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R2054:Tedc2	UTSW	17	24,435,292 (GRCm39)	nonsense	probably null
R2054:Tedc2	UTSW	17	24,435,291 (GRCm39)	missense	probably damaging	1.00
R2086:Tedc2	UTSW	17	24,436,874 (GRCm39)	missense	probably damaging	1.00
R2317:Tedc2	UTSW	17	24,435,358 (GRCm39)	missense	probably benign	0.00
R3705:Tedc2	UTSW	17	24,435,361 (GRCm39)	missense	probably benign	0.30
R4085:Tedc2	UTSW	17	24,438,813 (GRCm39)	missense	probably benign	0.01
R4676:Tedc2	UTSW	17	24,438,985 (GRCm39)	missense	probably benign
R4686:Tedc2	UTSW	17	24,436,862 (GRCm39)	critical splice donor site	probably null
R4762:Tedc2	UTSW	17	24,435,354 (GRCm39)	missense	probably benign	0.05
R4837:Tedc2	UTSW	17	24,439,567 (GRCm39)	missense	probably damaging	1.00
R4863:Tedc2	UTSW	17	24,436,910 (GRCm39)	missense	probably damaging	1.00
R5936:Tedc2	UTSW	17	24,435,315 (GRCm39)	missense	probably damaging	1.00
R9159:Tedc2	UTSW	17	24,436,705 (GRCm39)	missense	probably damaging	1.00
R9643:Tedc2	UTSW	17	24,435,328 (GRCm39)	missense	probably benign
RF031:Tedc2	UTSW	17	24,435,213 (GRCm39)	critical splice donor site	probably benign
Z1177:Tedc2	UTSW	17	24,439,545 (GRCm39)	missense	possibly damaging	0.92

Predicted Primers

PCR Primer
(F):5'- TCTTGTACCCAATACACGGC -3'
(R):5'- GGGATAGAATGTTTGGACCATACC -3'

Sequencing Primer
(F):5'- ATACACGGCTGCCACCC -3'
(R):5'- CATACCATGGCTGCCCTG -3'

Posted On

2015-10-08