Mutagenetix > Incidental Mutation

Incidental Mutation 'R4709:Hpx'

355484

Institutional Source

Beutler Lab

Gene Symbol

Hpx

Ensembl Gene

ENSMUSG00000030895

Gene Name

hemopexin

Synonyms

Hpxn, hx

MMRRC Submission

042018-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R4709 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

105240818-105249323 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 105249243 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 19 (S19P)

Ref Sequence

ENSEMBL: ENSMUSP00000033185 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033185] [ENSMUST00000106791] [ENSMUST00000210531]

AlphaFold

Q91X72

Predicted Effect

probably benign
Transcript: ENSMUST00000033185
AA Change: S19P

PolyPhen 2 Score 0.054 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000033185
Gene: ENSMUSG00000030895
AA Change: S19P

Domain	Start	End	E-Value	Type
HX	56	93	1.29e0	SMART
HX	97	140	5.52e-8	SMART
Blast:HX	143	186	3e-7	BLAST
HX	187	230	3.48e-5	SMART
HX	261	304	1.07e-5	SMART
HX	306	351	5.49e-3	SMART
Blast:HX	358	403	2e-17	BLAST

Predicted Effect

probably benign
Transcript: ENSMUST00000106791

SMART Domains

Protein: ENSMUSP00000102403
Gene: ENSMUSG00000036989

Domain	Start	End	E-Value	Type
RING	22	62	6.43e-8	SMART
BBOX	110	151	7.54e-14	SMART
BBC	158	284	2.55e-42	SMART
IG_FLMN	321	421	1.06e-31	SMART
Pfam:NHL	486	513	3.4e-8	PFAM
Pfam:NHL	533	560	7.6e-10	PFAM
Pfam:NHL	575	602	4.4e-7	PFAM
Pfam:NHL	622	649	7.6e-10	PFAM
Pfam:NHL	669	696	2.7e-11	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000210531
AA Change: S19P

PolyPhen 2 Score 0.036 (Sensitivity: 0.94; Specificity: 0.82)

Meta Mutation Damage Score

0.0738

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.7%
20x: 93.9%

Validation Efficiency

97% (77/79)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a plasma glycoprotein that binds heme with high affinity. The encoded protein is an acute phase protein that transports heme from the plasma to the liver and may be involved in protecting cells from oxidative stress. [provided by RefSeq, Apr 2009]
PHENOTYPE: Mice homozygous for disruptions in this gene display an essentially normal phenotype. However, they have increased susceptiblity to induced hemolytic stress. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcf1	G	A	17: 36,271,069 (GRCm39)	T463M	probably damaging	Het
Arhgap35	C	T	7: 16,297,511 (GRCm39)	G518D	probably damaging	Het
Arhgdia	A	G	11: 120,470,517 (GRCm39)	Y110H	probably damaging	Het
Atp8b3	T	C	10: 80,372,604 (GRCm39)		probably null	Het
Bpifb6	T	A	2: 153,750,436 (GRCm39)	I309N	possibly damaging	Het
Cbr4	T	C	8: 61,943,061 (GRCm39)	V77A	possibly damaging	Het
Cers2	A	G	3: 95,227,534 (GRCm39)	Y54C	possibly damaging	Het
Cnbp	A	T	6: 87,821,120 (GRCm39)	H145Q	probably damaging	Het
Csmd1	A	T	8: 16,073,905 (GRCm39)	I2030N	possibly damaging	Het
Csmd1	A	G	8: 16,760,522 (GRCm39)		probably null	Het
Dhodh	T	C	8: 110,328,170 (GRCm39)		probably null	Het
Dnah11	T	A	12: 117,982,495 (GRCm39)	Y2558F	probably benign	Het
Dysf	C	A	6: 84,074,697 (GRCm39)	D499E	probably damaging	Het
En1	A	T	1: 120,534,872 (GRCm39)	Y387F	unknown	Het
Ephb2	C	A	4: 136,423,363 (GRCm39)	C305F	probably damaging	Het
Fryl	A	G	5: 73,238,315 (GRCm39)	V1477A	probably benign	Het
Gimap3	A	T	6: 48,742,327 (GRCm39)	L201Q	probably benign	Het
Gm10801	T	G	2: 98,494,246 (GRCm39)		probably null	Het
Grhl1	A	G	12: 24,636,132 (GRCm39)	I283V	possibly damaging	Het
Grid2ip	T	A	5: 143,374,658 (GRCm39)	L926H	probably damaging	Het
Gtf2h2	G	T	13: 100,605,523 (GRCm39)	C82*	probably null	Het
Gtf2ird1	T	C	5: 134,433,588 (GRCm39)	T280A	probably benign	Het
Gzmd	T	C	14: 56,367,698 (GRCm39)	I192V	probably null	Het
Hectd1	A	G	12: 51,834,695 (GRCm39)	V855A	possibly damaging	Het
Hey1	A	G	3: 8,730,963 (GRCm39)		probably benign	Het
Incenp	G	A	19: 9,853,964 (GRCm39)	R696W	unknown	Het
Itgam	T	C	7: 127,700,709 (GRCm39)	V493A	probably damaging	Het
Ldlrad3	A	G	2: 101,900,343 (GRCm39)	I53T	probably damaging	Het
Map3k7	G	T	4: 31,985,700 (GRCm39)	E208*	probably null	Het
Myh9	A	T	15: 77,671,717 (GRCm39)	I458N	probably damaging	Het
Myo1c	C	T	11: 75,560,856 (GRCm39)	R770*	probably null	Het
Nectin3	T	A	16: 46,284,306 (GRCm39)	Y126F	possibly damaging	Het
Nek5	A	T	8: 22,573,443 (GRCm39)	N504K	probably damaging	Het
Nlrp4c	T	A	7: 6,068,424 (GRCm39)	H108Q	probably benign	Het
Or10d5	A	T	9: 39,861,165 (GRCm39)	L301M	probably damaging	Het
Or2ak4	T	C	11: 58,649,013 (GRCm39)	V174A	possibly damaging	Het
Or2at1	A	T	7: 99,416,989 (GRCm39)	I207F	probably damaging	Het
Or5h17	A	T	16: 58,820,458 (GRCm39)	T137S	probably benign	Het
Or9a2	G	T	6: 41,748,442 (GRCm39)	Q264K	probably benign	Het
Or9i14	T	A	19: 13,792,814 (GRCm39)	I47F	possibly damaging	Het
Parp6	T	C	9: 59,549,052 (GRCm39)	I507T	probably damaging	Het
Pcdhb12	A	G	18: 37,570,548 (GRCm39)	T565A	probably benign	Het
Pclo	A	G	5: 14,828,572 (GRCm39)	N4676D	unknown	Het
Pdlim1	T	A	19: 40,211,180 (GRCm39)	H278L	probably benign	Het
Pfkfb3	G	A	2: 11,498,719 (GRCm39)	T46M	probably damaging	Het
Plscr2	A	G	9: 92,173,067 (GRCm39)	Y203C	probably damaging	Het
Plxna1	T	C	6: 89,311,733 (GRCm39)	D924G	possibly damaging	Het
Postn	T	A	3: 54,292,031 (GRCm39)		probably benign	Het
Ptpn23	A	G	9: 110,217,924 (GRCm39)	S674P	possibly damaging	Het
Ranbp6	C	T	19: 29,788,984 (GRCm39)	R456Q	probably benign	Het
Rbm43	A	T	2: 51,819,728 (GRCm39)	V46E	probably damaging	Het
Rlig1	T	C	10: 100,414,243 (GRCm39)	I139V	probably benign	Het
Rtn4r	A	G	16: 17,969,046 (GRCm39)	Y158C	probably damaging	Het
Ryr2	A	G	13: 11,731,884 (GRCm39)	I2352T	probably damaging	Het
Sbk2	G	T	7: 4,960,577 (GRCm39)	R198S	possibly damaging	Het
Scube3	G	A	17: 28,386,166 (GRCm39)		probably null	Het
Slc45a1	G	A	4: 150,722,697 (GRCm39)	P396S	probably benign	Het
Slc4a10	A	G	2: 62,087,861 (GRCm39)	D418G	probably null	Het
Smarcad1	A	G	6: 65,052,099 (GRCm39)	T411A	probably benign	Het
Smtn	G	A	11: 3,474,663 (GRCm39)	S716F	probably damaging	Het
Stag1	G	T	9: 100,620,092 (GRCm39)	R65L	probably damaging	Het
Stat1	A	T	1: 52,165,680 (GRCm39)	D92V	probably damaging	Het
Ttn	A	G	2: 76,582,428 (GRCm39)	Y22822H	probably damaging	Het
Vmn1r172	A	G	7: 23,359,606 (GRCm39)	T164A	probably benign	Het
Vmn2r118	A	T	17: 55,917,860 (GRCm39)	D217E	probably damaging	Het
Vmn2r26	A	G	6: 124,030,924 (GRCm39)	E553G	probably damaging	Het
Vmn2r96	T	C	17: 18,803,088 (GRCm39)	F333L	probably benign	Het
Ypel5	G	A	17: 73,155,726 (GRCm39)	R98H	probably benign	Het
Zfp719	C	T	7: 43,239,656 (GRCm39)	H415Y	probably damaging	Het
Zyg11a	T	C	4: 108,062,268 (GRCm39)	S176G	probably benign	Het

Other mutations in Hpx

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00337:Hpx	APN	7	105,240,977 (GRCm39)	missense	probably damaging	1.00
IGL01861:Hpx	APN	7	105,241,393 (GRCm39)	nonsense	probably null
IGL02441:Hpx	APN	7	105,241,430 (GRCm39)	missense	probably damaging	1.00
IGL03117:Hpx	APN	7	105,249,278 (GRCm39)	missense	possibly damaging	0.94
IGL03230:Hpx	APN	7	105,248,519 (GRCm39)	missense	probably benign	0.04
IGL03376:Hpx	APN	7	105,241,458 (GRCm39)	unclassified	probably benign
IGL03392:Hpx	APN	7	105,241,609 (GRCm39)	missense	probably damaging	1.00
PIT4520001:Hpx	UTSW	7	105,241,341 (GRCm39)	missense	probably benign	0.00
R0138:Hpx	UTSW	7	105,241,445 (GRCm39)	missense	probably damaging	1.00
R0364:Hpx	UTSW	7	105,245,471 (GRCm39)	missense	probably benign	0.18
R1195:Hpx	UTSW	7	105,248,856 (GRCm39)	splice site	probably benign
R1195:Hpx	UTSW	7	105,248,856 (GRCm39)	splice site	probably benign
R1958:Hpx	UTSW	7	105,245,603 (GRCm39)	missense	probably damaging	1.00
R2007:Hpx	UTSW	7	105,244,781 (GRCm39)	missense	probably damaging	1.00
R2025:Hpx	UTSW	7	105,244,311 (GRCm39)	missense	probably damaging	1.00
R2173:Hpx	UTSW	7	105,241,290 (GRCm39)	missense	probably benign	0.01
R2207:Hpx	UTSW	7	105,241,633 (GRCm39)	missense	probably damaging	1.00
R3162:Hpx	UTSW	7	105,248,847 (GRCm39)	intron	probably benign
R3849:Hpx	UTSW	7	105,245,498 (GRCm39)	missense	probably damaging	1.00
R4206:Hpx	UTSW	7	105,244,354 (GRCm39)	missense	probably null	0.01
R4510:Hpx	UTSW	7	105,241,295 (GRCm39)	missense	possibly damaging	0.94
R4511:Hpx	UTSW	7	105,241,295 (GRCm39)	missense	possibly damaging	0.94
R5029:Hpx	UTSW	7	105,240,971 (GRCm39)	missense	probably damaging	1.00
R5540:Hpx	UTSW	7	105,241,119 (GRCm39)	missense	possibly damaging	0.67
R5631:Hpx	UTSW	7	105,244,808 (GRCm39)	missense	probably damaging	0.96
R5664:Hpx	UTSW	7	105,244,355 (GRCm39)	missense	probably benign	0.02
R5820:Hpx	UTSW	7	105,240,995 (GRCm39)	missense	possibly damaging	0.89
R5922:Hpx	UTSW	7	105,244,831 (GRCm39)	missense	probably damaging	1.00
R6707:Hpx	UTSW	7	105,244,682 (GRCm39)	missense	probably benign	0.09
R6714:Hpx	UTSW	7	105,244,302 (GRCm39)	missense	probably damaging	0.98
R7356:Hpx	UTSW	7	105,240,917 (GRCm39)	missense	probably damaging	0.99
R7425:Hpx	UTSW	7	105,241,068 (GRCm39)	missense	probably damaging	1.00
R8048:Hpx	UTSW	7	105,244,685 (GRCm39)	missense	probably benign
R8184:Hpx	UTSW	7	105,241,352 (GRCm39)	missense	probably damaging	0.99
X0066:Hpx	UTSW	7	105,245,594 (GRCm39)	missense	probably benign	0.17

Predicted Primers

PCR Primer
(F):5'- TCTGAATCTGGCTTGGTCCC -3'
(R):5'- TTGCTGTGATGTCATCTGCC -3'

Sequencing Primer
(F):5'- AACTTCGGCAACTCTCCCG -3'
(R):5'- CCAATATTGGCATAGTCATGGAAGAC -3'

Posted On

2015-10-21