Incidental Mutation 'R4754:Chd5'
| ID |
357783 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Chd5
|
| Ensembl Gene |
ENSMUSG00000005045 |
| Gene Name |
chromodomain helicase DNA binding protein 5 |
| Synonyms |
B230399N07Rik, 4930532L22Rik |
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R4754 (G1)
|
| Quality Score |
170 |
|
Status
|
Validated
|
| Chromosome |
4 |
| Chromosomal Location |
152423108-152474651 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 152462203 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Asparagine
at position 1310
(I1310N)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000132600
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000005175]
[ENSMUST00000030775]
[ENSMUST00000164662]
|
| AlphaFold |
A2A8L1 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000005175
AA Change: I1347N
PolyPhen 2
Score 0.206 (Sensitivity: 0.92; Specificity: 0.88)
|
| SMART Domains |
Protein: ENSMUSP00000005175
Gene: ENSMUSG00000005045
AA Change: I1347N
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
|
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
|
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
|
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
|
Pfam:CHDNT
|
149 |
203 |
2e-32 |
PFAM |
|
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
|
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
|
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
|
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
|
PHD
|
347 |
390 |
1.09e-14 |
SMART |
|
RING
|
348 |
389 |
4.48e-1 |
SMART |
|
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
|
PHD
|
420 |
463 |
3.29e-14 |
SMART |
|
RING
|
421 |
462 |
4.15e0 |
SMART |
|
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
|
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
|
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
|
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
|
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
|
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
|
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
|
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
|
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
|
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
|
Pfam:CHDCT2
|
1729 |
1901 |
1.7e-99 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000030775
AA Change: I1347N
PolyPhen 2
Score 0.978 (Sensitivity: 0.76; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000030775
Gene: ENSMUSG00000005045
AA Change: I1347N
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
|
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
|
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
|
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
|
Pfam:CHDNT
|
150 |
203 |
9e-28 |
PFAM |
|
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
|
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
|
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
|
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
|
PHD
|
347 |
390 |
1.09e-14 |
SMART |
|
RING
|
348 |
389 |
4.48e-1 |
SMART |
|
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
|
PHD
|
420 |
463 |
3.29e-14 |
SMART |
|
RING
|
421 |
462 |
4.15e0 |
SMART |
|
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
|
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
|
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
|
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
|
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
|
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
|
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
|
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
|
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
|
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
|
Pfam:CHDCT2
|
1730 |
1901 |
2.8e-93 |
PFAM |
|
low complexity region
|
1922 |
1936 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124423
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000164662
AA Change: I1310N
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000132600
Gene: ENSMUSG00000005045
AA Change: I1310N
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
|
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
|
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
|
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
|
Pfam:CHDNT
|
149 |
203 |
1.9e-32 |
PFAM |
|
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
|
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
|
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
|
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
|
PHD
|
347 |
390 |
1.09e-14 |
SMART |
|
RING
|
348 |
389 |
4.48e-1 |
SMART |
|
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
|
PHD
|
420 |
463 |
3.29e-14 |
SMART |
|
RING
|
421 |
462 |
4.15e0 |
SMART |
|
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
|
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
|
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
|
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
|
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
|
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
|
DUF1087
|
1260 |
1324 |
2.78e-33 |
SMART |
|
DUF1086
|
1337 |
1496 |
5.11e-105 |
SMART |
|
low complexity region
|
1515 |
1530 |
N/A |
INTRINSIC |
|
low complexity region
|
1648 |
1664 |
N/A |
INTRINSIC |
|
Pfam:CHDCT2
|
1692 |
1864 |
1.7e-99 |
PFAM |
|
low complexity region
|
1885 |
1899 |
N/A |
INTRINSIC |
|
| Meta Mutation Damage Score |
0.0788 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.7%
|
| Validation Efficiency |
98% (107/109) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the chromodomain helicase DNA-binding protein family. Members of this family are characterized by a chromodomain, a helicase ATP-binding domain and an additional functional domain. This gene encodes a neuron-specific protein that may function in chromatin remodeling and gene transcription. This gene is a potential tumor suppressor gene that may play a role in the development of neuroblastoma. [provided by RefSeq, Feb 2012]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit male infertility with abnormal spermiogenesis and chromatin condensation. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 94 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A130010J15Rik |
A |
G |
1: 192,856,837 (GRCm39) |
Y63C |
probably damaging |
Het |
| Abcb4 |
C |
A |
5: 8,960,717 (GRCm39) |
F266L |
probably damaging |
Het |
| Adam8 |
A |
T |
7: 139,564,693 (GRCm39) |
I681N |
possibly damaging |
Het |
| Adgrf3 |
T |
A |
5: 30,402,615 (GRCm39) |
|
probably null |
Het |
| Ang2 |
A |
G |
14: 51,432,974 (GRCm39) |
V136A |
probably damaging |
Het |
| Ankar |
C |
T |
1: 72,737,853 (GRCm39) |
G110R |
probably damaging |
Het |
| Ap3b1 |
T |
C |
13: 94,540,468 (GRCm39) |
L130P |
probably damaging |
Het |
| Apc2 |
T |
G |
10: 80,150,192 (GRCm39) |
W1749G |
probably benign |
Het |
| Asb2 |
T |
C |
12: 103,290,096 (GRCm39) |
N565S |
possibly damaging |
Het |
| B3gnt7 |
C |
A |
1: 86,233,279 (GRCm39) |
T58K |
probably benign |
Het |
| Bltp1 |
C |
T |
3: 37,076,615 (GRCm39) |
Q3663* |
probably null |
Het |
| Brpf1 |
T |
A |
6: 113,297,408 (GRCm39) |
N876K |
possibly damaging |
Het |
| Ccdc157 |
T |
C |
11: 4,098,994 (GRCm39) |
I69V |
possibly damaging |
Het |
| Cd109 |
CATTTATTTATTTATTTATTTATTTATTTATTTAT |
CATTTATTTATTTATTTATTTATTTATTTATTTATTTAT |
9: 78,619,782 (GRCm39) |
|
probably benign |
Het |
| Cdh20 |
A |
T |
1: 104,912,410 (GRCm39) |
I555F |
probably damaging |
Het |
| Cfap73 |
T |
C |
5: 120,767,729 (GRCm39) |
D274G |
probably damaging |
Het |
| Ckap2 |
T |
A |
8: 22,658,911 (GRCm39) |
I611F |
possibly damaging |
Het |
| Cpeb2 |
A |
G |
5: 43,443,200 (GRCm39) |
I964V |
possibly damaging |
Het |
| Ctbp2 |
C |
A |
7: 132,625,287 (GRCm39) |
|
probably null |
Het |
| Dhrs2 |
A |
T |
14: 55,476,205 (GRCm39) |
I142F |
probably damaging |
Het |
| Dnah5 |
T |
A |
15: 28,421,101 (GRCm39) |
|
probably null |
Het |
| Dst |
T |
C |
1: 34,251,390 (GRCm39) |
S1822P |
probably damaging |
Het |
| Ect2 |
T |
C |
3: 27,181,112 (GRCm39) |
K581E |
probably damaging |
Het |
| Edem1 |
C |
T |
6: 108,818,658 (GRCm39) |
T222M |
probably damaging |
Het |
| Eif2ak1 |
A |
G |
5: 143,838,621 (GRCm39) |
M592V |
probably damaging |
Het |
| Endou |
T |
G |
15: 97,624,420 (GRCm39) |
D49A |
probably damaging |
Het |
| Ensa |
A |
G |
3: 95,529,865 (GRCm39) |
|
probably benign |
Het |
| Evc2 |
G |
T |
5: 37,544,375 (GRCm39) |
R708L |
probably damaging |
Het |
| Fam120b |
T |
A |
17: 15,643,224 (GRCm39) |
C668S |
probably damaging |
Het |
| Fam135a |
A |
T |
1: 24,067,835 (GRCm39) |
C798* |
probably null |
Het |
| Fam135b |
T |
C |
15: 71,334,800 (GRCm39) |
D798G |
probably benign |
Het |
| Fshb |
A |
C |
2: 106,887,627 (GRCm39) |
*131E |
probably null |
Het |
| G3bp2 |
C |
T |
5: 92,202,768 (GRCm39) |
V441M |
possibly damaging |
Het |
| Galnt6 |
A |
T |
15: 100,597,105 (GRCm39) |
F354I |
probably damaging |
Het |
| Gm1123 |
C |
A |
9: 98,905,293 (GRCm39) |
|
probably null |
Het |
| Gm1123 |
A |
T |
9: 98,905,294 (GRCm39) |
|
probably null |
Het |
| Gm15130 |
T |
C |
2: 110,973,207 (GRCm39) |
N115S |
unknown |
Het |
| Gm7104 |
A |
G |
12: 88,252,765 (GRCm39) |
|
noncoding transcript |
Het |
| Gm9762 |
A |
T |
3: 78,873,728 (GRCm39) |
|
noncoding transcript |
Het |
| Grip2 |
T |
C |
6: 91,756,173 (GRCm39) |
T505A |
probably damaging |
Het |
| Grip2 |
A |
G |
6: 91,756,163 (GRCm39) |
V508A |
probably damaging |
Het |
| Haus4 |
A |
G |
14: 54,787,349 (GRCm39) |
|
probably null |
Het |
| Herc1 |
T |
A |
9: 66,408,488 (GRCm39) |
D4571E |
probably benign |
Het |
| Hnrnpk |
T |
A |
13: 58,546,950 (GRCm39) |
|
probably benign |
Het |
| Ica1l |
T |
C |
1: 60,067,321 (GRCm39) |
Y23C |
probably damaging |
Het |
| Kansl2-ps |
A |
G |
7: 72,322,881 (GRCm39) |
|
noncoding transcript |
Het |
| Kcnma1 |
T |
C |
14: 23,413,904 (GRCm39) |
D833G |
probably damaging |
Het |
| Kmt2e |
A |
T |
5: 23,687,439 (GRCm39) |
I430F |
possibly damaging |
Het |
| Lama2 |
C |
A |
10: 26,994,527 (GRCm39) |
R1794L |
possibly damaging |
Het |
| Mcpt1 |
T |
A |
14: 56,256,137 (GRCm39) |
F59I |
probably damaging |
Het |
| Mib2 |
G |
T |
4: 155,739,822 (GRCm39) |
T783K |
possibly damaging |
Het |
| Nlrp4g |
T |
C |
9: 124,349,788 (GRCm38) |
|
noncoding transcript |
Het |
| Nudt16l2 |
A |
T |
9: 105,021,592 (GRCm39) |
F151L |
probably benign |
Het |
| Obscn |
T |
C |
11: 58,926,869 (GRCm39) |
I6352V |
possibly damaging |
Het |
| Or2j6 |
C |
T |
7: 139,980,072 (GRCm39) |
A296T |
probably damaging |
Het |
| Or4a72 |
A |
T |
2: 89,405,391 (GRCm39) |
H226Q |
probably benign |
Het |
| Or4k1 |
T |
A |
14: 50,377,490 (GRCm39) |
N202I |
possibly damaging |
Het |
| Or4k1 |
T |
G |
14: 50,377,491 (GRCm39) |
N202H |
probably benign |
Het |
| Or52a5 |
T |
C |
7: 103,426,875 (GRCm39) |
I226V |
probably benign |
Het |
| Or5b125-ps1 |
T |
A |
19: 13,056,225 (GRCm39) |
|
noncoding transcript |
Het |
| Pcdh10 |
G |
A |
3: 45,335,072 (GRCm39) |
R462H |
probably damaging |
Het |
| Pcdhga12 |
C |
A |
18: 37,899,604 (GRCm39) |
N145K |
probably damaging |
Het |
| Pik3r6 |
T |
A |
11: 68,435,601 (GRCm39) |
L613Q |
probably damaging |
Het |
| Pknox2 |
T |
C |
9: 36,821,016 (GRCm39) |
D282G |
probably damaging |
Het |
| Plod2 |
T |
G |
9: 92,488,584 (GRCm39) |
Y624* |
probably null |
Het |
| Prkd3 |
C |
A |
17: 79,264,043 (GRCm39) |
V684F |
probably damaging |
Het |
| Ptpn1 |
T |
A |
2: 167,816,080 (GRCm39) |
V198D |
probably damaging |
Het |
| Ptpn12 |
G |
T |
5: 21,203,587 (GRCm39) |
P397Q |
probably benign |
Het |
| Rad1 |
C |
A |
15: 10,493,212 (GRCm39) |
|
probably benign |
Het |
| Rasl11a |
A |
G |
5: 146,783,825 (GRCm39) |
D90G |
probably benign |
Het |
| Rnf181 |
A |
G |
6: 72,337,543 (GRCm39) |
|
probably benign |
Het |
| Ryr3 |
T |
C |
2: 112,587,984 (GRCm39) |
I2652M |
possibly damaging |
Het |
| Siglecg |
C |
T |
7: 43,061,295 (GRCm39) |
|
probably benign |
Het |
| Slc22a3 |
T |
C |
17: 12,726,082 (GRCm39) |
S44G |
probably benign |
Het |
| Slc38a1 |
A |
T |
15: 96,474,663 (GRCm39) |
F463I |
probably damaging |
Het |
| Smg1 |
A |
T |
7: 117,755,954 (GRCm39) |
|
probably benign |
Het |
| Syk |
T |
C |
13: 52,766,295 (GRCm39) |
|
probably benign |
Het |
| Tasor |
A |
T |
14: 27,183,052 (GRCm39) |
I504L |
probably benign |
Het |
| Tbc1d5 |
T |
C |
17: 51,107,193 (GRCm39) |
I454M |
probably benign |
Het |
| Tmed6 |
C |
A |
8: 107,790,362 (GRCm39) |
D146Y |
probably damaging |
Het |
| Tmem132e |
A |
T |
11: 82,335,677 (GRCm39) |
K828* |
probably null |
Het |
| Tmprss15 |
A |
T |
16: 78,851,012 (GRCm39) |
S294T |
probably damaging |
Het |
| Trp53bp1 |
A |
G |
2: 121,038,360 (GRCm39) |
S1493P |
probably damaging |
Het |
| Tshb |
A |
T |
3: 102,685,491 (GRCm39) |
I46N |
probably damaging |
Het |
| Tspan11 |
T |
C |
6: 127,915,183 (GRCm39) |
V99A |
probably benign |
Het |
| Ttn |
T |
C |
2: 76,545,905 (GRCm39) |
T24176A |
probably benign |
Het |
| Vmn1r8 |
T |
C |
6: 57,012,952 (GRCm39) |
M1T |
probably null |
Het |
| Vmn2r104 |
A |
T |
17: 20,261,030 (GRCm39) |
Y464* |
probably null |
Het |
| Vmn2r110 |
T |
C |
17: 20,816,458 (GRCm39) |
T22A |
probably benign |
Het |
| Vmn2r17 |
T |
A |
5: 109,600,715 (GRCm39) |
I671K |
probably damaging |
Het |
| Zbtb21 |
T |
C |
16: 97,752,466 (GRCm39) |
N606D |
probably damaging |
Het |
| Zfy2 |
A |
T |
Y: 2,121,477 (GRCm39) |
S139T |
probably benign |
Het |
| Zkscan17 |
G |
A |
11: 59,393,851 (GRCm39) |
R156* |
probably null |
Het |
| Zp2 |
A |
G |
7: 119,737,541 (GRCm39) |
V248A |
probably benign |
Het |
|
| Other mutations in Chd5 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00537:Chd5
|
APN |
4 |
152,445,059 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00886:Chd5
|
APN |
4 |
152,444,156 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL00963:Chd5
|
APN |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01399:Chd5
|
APN |
4 |
152,441,144 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01571:Chd5
|
APN |
4 |
152,468,572 (GRCm39) |
splice site |
probably benign |
|
|
IGL01606:Chd5
|
APN |
4 |
152,445,432 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01636:Chd5
|
APN |
4 |
152,469,110 (GRCm39) |
nonsense |
probably null |
|
|
IGL02009:Chd5
|
APN |
4 |
152,450,670 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02417:Chd5
|
APN |
4 |
152,451,751 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL02504:Chd5
|
APN |
4 |
152,447,779 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02508:Chd5
|
APN |
4 |
152,447,481 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02597:Chd5
|
APN |
4 |
152,456,169 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02608:Chd5
|
APN |
4 |
152,440,564 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL02612:Chd5
|
APN |
4 |
152,445,033 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02658:Chd5
|
APN |
4 |
152,445,050 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02662:Chd5
|
APN |
4 |
152,456,588 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02676:Chd5
|
APN |
4 |
152,440,530 (GRCm39) |
splice site |
probably benign |
|
|
IGL02871:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02942:Chd5
|
APN |
4 |
152,470,182 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL02956:Chd5
|
APN |
4 |
152,464,413 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03286:Chd5
|
APN |
4 |
152,469,952 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03348:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03398:Chd5
|
APN |
4 |
152,461,539 (GRCm39) |
missense |
probably damaging |
0.97 |
|
PIT1430001:Chd5
|
UTSW |
4 |
152,455,094 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT4151001:Chd5
|
UTSW |
4 |
152,462,986 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0079:Chd5
|
UTSW |
4 |
152,470,206 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0379:Chd5
|
UTSW |
4 |
152,467,778 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0388:Chd5
|
UTSW |
4 |
152,456,101 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0675:Chd5
|
UTSW |
4 |
152,470,407 (GRCm39) |
missense |
probably benign |
0.06 |
|
R0730:Chd5
|
UTSW |
4 |
152,432,441 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R0799:Chd5
|
UTSW |
4 |
152,468,616 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0800:Chd5
|
UTSW |
4 |
152,440,614 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1276:Chd5
|
UTSW |
4 |
152,463,191 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1752:Chd5
|
UTSW |
4 |
152,459,590 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1753:Chd5
|
UTSW |
4 |
152,463,272 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1843:Chd5
|
UTSW |
4 |
152,470,263 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1850:Chd5
|
UTSW |
4 |
152,454,990 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1851:Chd5
|
UTSW |
4 |
152,462,727 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1859:Chd5
|
UTSW |
4 |
152,464,980 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1983:Chd5
|
UTSW |
4 |
152,469,123 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R2404:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2897:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2898:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3893:Chd5
|
UTSW |
4 |
152,445,113 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3938:Chd5
|
UTSW |
4 |
152,461,512 (GRCm39) |
missense |
probably benign |
0.05 |
|
R4707:Chd5
|
UTSW |
4 |
152,445,039 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4911:Chd5
|
UTSW |
4 |
152,445,129 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4924:Chd5
|
UTSW |
4 |
152,450,886 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
R4926:Chd5
|
UTSW |
4 |
152,467,768 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5256:Chd5
|
UTSW |
4 |
152,456,554 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5524:Chd5
|
UTSW |
4 |
152,461,087 (GRCm39) |
missense |
probably benign |
|
|
R5552:Chd5
|
UTSW |
4 |
152,470,272 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R5895:Chd5
|
UTSW |
4 |
152,464,389 (GRCm39) |
missense |
probably benign |
0.13 |
|
R5945:Chd5
|
UTSW |
4 |
152,464,408 (GRCm39) |
missense |
probably benign |
|
|
R6007:Chd5
|
UTSW |
4 |
152,463,878 (GRCm39) |
missense |
probably null |
1.00 |
|
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
|
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
|
R6172:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6173:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6323:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6331:Chd5
|
UTSW |
4 |
152,466,865 (GRCm39) |
missense |
probably benign |
0.02 |
|
R6495:Chd5
|
UTSW |
4 |
152,451,829 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6528:Chd5
|
UTSW |
4 |
152,441,133 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6849:Chd5
|
UTSW |
4 |
152,462,995 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6854:Chd5
|
UTSW |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6859:Chd5
|
UTSW |
4 |
152,462,664 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6999:Chd5
|
UTSW |
4 |
152,458,891 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7034:Chd5
|
UTSW |
4 |
152,445,398 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R7110:Chd5
|
UTSW |
4 |
152,469,896 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7361:Chd5
|
UTSW |
4 |
152,447,745 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7397:Chd5
|
UTSW |
4 |
152,452,469 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R7440:Chd5
|
UTSW |
4 |
152,469,108 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7489:Chd5
|
UTSW |
4 |
152,457,925 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7810:Chd5
|
UTSW |
4 |
152,443,032 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8057:Chd5
|
UTSW |
4 |
152,450,829 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8078:Chd5
|
UTSW |
4 |
152,445,448 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R8092:Chd5
|
UTSW |
4 |
152,463,261 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8170:Chd5
|
UTSW |
4 |
152,461,040 (GRCm39) |
missense |
probably benign |
0.26 |
|
R8255:Chd5
|
UTSW |
4 |
152,463,880 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8348:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8448:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8478:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
|
R8482:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
|
R8670:Chd5
|
UTSW |
4 |
152,469,953 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R8733:Chd5
|
UTSW |
4 |
152,463,923 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8743:Chd5
|
UTSW |
4 |
152,450,862 (GRCm39) |
missense |
probably benign |
0.03 |
|
R8941:Chd5
|
UTSW |
4 |
152,463,305 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R8961:Chd5
|
UTSW |
4 |
152,467,489 (GRCm39) |
splice site |
probably benign |
|
|
R9103:Chd5
|
UTSW |
4 |
152,461,444 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R9160:Chd5
|
UTSW |
4 |
152,469,916 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9221:Chd5
|
UTSW |
4 |
152,456,122 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R9399:Chd5
|
UTSW |
4 |
152,468,592 (GRCm39) |
missense |
probably benign |
0.06 |
|
R9429:Chd5
|
UTSW |
4 |
152,447,364 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9635:Chd5
|
UTSW |
4 |
152,461,079 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R9783:Chd5
|
UTSW |
4 |
152,458,865 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Chd5
|
UTSW |
4 |
152,462,936 (GRCm39) |
missense |
probably damaging |
0.98 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGGCAGAACAACTGGGTGTG -3'
(R):5'- TCATCCACTCCACGGTCAAG -3'
Sequencing Primer
(F):5'- GTGTGCCCGGCTATCTC -3'
(R):5'- ACTCCACGGTCAAGGTGTG -3'
|
| Posted On |
2015-11-11 |
Incidental Mutation