Incidental Mutation 'R4741:Vmn1r17'
ID358073
Institutional Source Beutler Lab
Gene Symbol Vmn1r17
Ensembl Gene ENSMUSG00000115644
Gene Namevomeronasal 1 receptor 17
SynonymsV1rc16
MMRRC Submission 042026-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.219) question?
Stock #R4741 (G1)
Quality Score225
Status Not validated
Chromosome6
Chromosomal Location57359239-57363727 bp(-) (GRCm38)
Type of Mutationnonsense
DNA Base Change (assembly) A to T at 57361352 bp
ZygosityHeterozygous
Amino Acid Change Tyrosine to Stop codon at position 9 (Y9*)
Ref Sequence ENSEMBL: ENSMUSP00000154129 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000176395] [ENSMUST00000227186] [ENSMUST00000227966] [ENSMUST00000228156] [ENSMUST00000228294] [ENSMUST00000228342]
Predicted Effect probably null
Transcript: ENSMUST00000176395
AA Change: Y9*
SMART Domains Protein: ENSMUSP00000135746
Gene: ENSMUSG00000093411
AA Change: Y9*

DomainStartEndE-ValueType
Pfam:V1R 28 293 1.4e-53 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000227186
AA Change: Y9*
Predicted Effect probably null
Transcript: ENSMUST00000227966
AA Change: Y9*
Predicted Effect probably benign
Transcript: ENSMUST00000228156
Predicted Effect probably benign
Transcript: ENSMUST00000228294
Predicted Effect probably null
Transcript: ENSMUST00000228342
AA Change: Y9*
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.8%
  • 20x: 94.1%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4932438A13Rik A G 3: 36,942,375 T1079A probably damaging Het
Angptl2 T C 2: 33,246,188 Y462H probably benign Het
Arhgef12 A G 9: 42,972,153 I1360T possibly damaging Het
Armc10 T G 5: 21,651,836 L111R probably damaging Het
Atm T C 9: 53,453,607 K2628E probably benign Het
Best3 A T 10: 117,023,996 N387I probably benign Het
Brpf3 T C 17: 28,817,784 F721S possibly damaging Het
Cacna1c A G 6: 118,613,310 S1411P probably damaging Het
Cldn8 G A 16: 88,562,408 H210Y probably benign Het
Clip2 T A 5: 134,516,269 T344S probably benign Het
Csmd1 A C 8: 15,910,447 W3323G probably damaging Het
Doc2a A T 7: 126,851,445 T298S possibly damaging Het
Dpp9 T C 17: 56,205,286 N234S probably benign Het
Dtx2 C T 5: 136,026,517 R353C probably benign Het
Epm2aip1 A G 9: 111,272,613 H218R probably benign Het
F2rl1 G A 13: 95,514,143 T77M probably damaging Het
Fsd2 A G 7: 81,551,895 probably null Het
Grin2a T C 16: 9,663,512 Y475C probably damaging Het
H2-Ob T A 17: 34,242,571 S95T possibly damaging Het
Hddc3 A G 7: 80,345,716 T160A probably benign Het
Hp A T 8: 109,575,472 C281* probably null Het
Ighg1 T C 12: 113,326,558 probably benign Het
Ints7 A G 1: 191,619,635 I819V probably benign Het
Jam2 G A 16: 84,812,952 V151M probably damaging Het
Jmjd1c A G 10: 67,224,939 I737V possibly damaging Het
Krt74 C T 15: 101,761,441 noncoding transcript Het
Lnpep T C 17: 17,571,658 Y407C probably damaging Het
Lrp4 T G 2: 91,511,567 C1842G probably damaging Het
Mug2 T A 6: 122,079,613 N1172K probably benign Het
Npy6r A T 18: 44,275,724 T71S probably damaging Het
Nsd3 A T 8: 25,673,366 I591F probably damaging Het
Oog2 A C 4: 144,195,145 E208D possibly damaging Het
Otogl A G 10: 107,779,260 I1928T probably benign Het
Papss1 T C 3: 131,619,099 L418P probably damaging Het
Pcdhb13 T A 18: 37,443,518 D316E probably benign Het
Pcdhgb2 T A 18: 37,691,684 probably null Het
Ptcd3 T A 6: 71,902,949 L108F probably damaging Het
Ralgps1 T C 2: 33,336,587 S31G probably benign Het
Rnf225 A T 7: 12,927,930 H12L probably benign Het
Ryr3 T A 2: 112,803,268 M2047L probably damaging Het
Secisbp2l C T 2: 125,740,737 G933D possibly damaging Het
Serpinb3b G T 1: 107,154,470 Q355K probably benign Het
Slc8a2 T A 7: 16,134,308 F155Y probably damaging Het
Taf1c A G 8: 119,603,395 probably benign Het
Tln2 A G 9: 67,386,555 probably null Het
Tmpo A G 10: 91,162,644 V427A probably benign Het
Vmn2r63 C T 7: 42,928,120 M331I probably benign Het
Zdhhc1 CGGGGG CGGGGGG 8: 105,483,744 probably null Het
Zfand5 C T 19: 21,276,481 T16I probably damaging Het
Zfp352 A T 4: 90,224,940 K439M possibly damaging Het
Zfp786 G A 6: 47,820,691 H438Y probably damaging Het
Zfp808 T A 13: 62,171,949 C331S probably damaging Het
Other mutations in Vmn1r17
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00943:Vmn1r17 APN 6 57361200 missense possibly damaging 0.48
IGL02073:Vmn1r17 APN 6 57360802 missense probably benign 0.00
IGL03117:Vmn1r17 APN 6 57360516 missense probably benign 0.08
IGL03168:Vmn1r17 APN 6 57360598 missense probably benign 0.01
R0472:Vmn1r17 UTSW 6 57361319 missense probably benign
R0590:Vmn1r17 UTSW 6 57361014 missense probably benign 0.01
R0648:Vmn1r17 UTSW 6 57360475 missense probably damaging 0.98
R1025:Vmn1r17 UTSW 6 57361255 missense probably benign 0.05
R1545:Vmn1r17 UTSW 6 57361332 missense probably benign 0.01
R2035:Vmn1r17 UTSW 6 57360588 missense probably benign 0.13
R2507:Vmn1r17 UTSW 6 57361259 missense probably damaging 0.99
R2508:Vmn1r17 UTSW 6 57360870 missense possibly damaging 0.76
R3084:Vmn1r17 UTSW 6 57360783 missense probably damaging 0.99
R3688:Vmn1r17 UTSW 6 57360559 missense probably damaging 0.99
R3696:Vmn1r17 UTSW 6 57360538 missense possibly damaging 0.74
R4436:Vmn1r17 UTSW 6 57360734 missense possibly damaging 0.91
R4989:Vmn1r17 UTSW 6 57360475 missense possibly damaging 0.47
R5013:Vmn1r17 UTSW 6 57360843 missense probably benign 0.05
R5133:Vmn1r17 UTSW 6 57360843 missense probably benign 0.05
R5134:Vmn1r17 UTSW 6 57360843 missense probably benign 0.05
R5162:Vmn1r17 UTSW 6 57360843 missense probably benign 0.05
R5184:Vmn1r17 UTSW 6 57360843 missense probably benign 0.05
R5185:Vmn1r17 UTSW 6 57360843 missense probably benign 0.05
R5831:Vmn1r17 UTSW 6 57361014 missense probably benign 0.01
R6487:Vmn1r17 UTSW 6 57361224 missense possibly damaging 0.94
Predicted Primers PCR Primer
(F):5'- CACACTCAGGAGGCAAGTAGTAC -3'
(R):5'- AGAGACAAGGCAATCTTCAACTAG -3'

Sequencing Primer
(F):5'- AGAGGCCTCTTGTCACCCTG -3'
(R):5'- CAAGGCAATCTTCAACTAGTAAGG -3'
Posted On2015-11-11