Incidental Mutation 'IGL02820:Vmn2r80'
ID 360960
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r80
Ensembl Gene ENSMUSG00000091888
Gene Name vomeronasal 2, receptor 80
Synonyms EG624765
Accession Numbers
Essential gene? Probably non essential (E-score: 0.062) question?
Stock # IGL02820
Quality Score
Status
Chromosome 10
Chromosomal Location 78984650-79030767 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 79007439 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 472 (T472A)
Ref Sequence ENSEMBL: ENSMUSP00000132299 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000165834]
AlphaFold E9Q1L0
Predicted Effect probably benign
Transcript: ENSMUST00000165834
AA Change: T472A

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000132299
Gene: ENSMUSG00000091888
AA Change: T472A

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
Pfam:ANF_receptor 79 474 1.5e-36 PFAM
Pfam:NCD3G 517 570 7.9e-22 PFAM
Pfam:7tm_3 603 838 6.2e-49 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9030624G23Rik T C 12: 24,124,417 (GRCm39) Y86C probably benign Het
Adgra2 G A 8: 27,607,535 (GRCm39) V47M probably damaging Het
Anks1b T C 10: 89,912,921 (GRCm39) C349R possibly damaging Het
Anks4b A T 7: 119,781,914 (GRCm39) probably benign Het
Apobec2 A G 17: 48,730,295 (GRCm39) S124P probably damaging Het
Brd8 G A 18: 34,740,354 (GRCm39) S493L probably benign Het
Cbln3 A G 14: 56,120,944 (GRCm39) Y126H probably damaging Het
Ccdc138 T C 10: 58,364,721 (GRCm39) probably benign Het
Cckbr C T 7: 105,083,238 (GRCm39) A147V probably damaging Het
Ceacam2 T A 7: 25,219,411 (GRCm39) H283L probably damaging Het
Cfap251 A G 5: 123,392,699 (GRCm39) probably benign Het
Clasp1 A G 1: 118,478,834 (GRCm39) D718G possibly damaging Het
Clmn A T 12: 104,739,493 (GRCm39) Y979N probably damaging Het
Ddias T C 7: 92,508,551 (GRCm39) T455A probably benign Het
Dennd5b T C 6: 148,920,840 (GRCm39) R851G probably null Het
Dock1 T C 7: 134,768,944 (GRCm39) V1771A probably benign Het
Dysf T A 6: 84,077,187 (GRCm39) L694Q probably damaging Het
Faim2 T C 15: 99,419,138 (GRCm39) Y77C probably benign Het
Fbxw22 A T 9: 109,215,732 (GRCm39) I172N probably damaging Het
Fhad1 C T 4: 141,646,069 (GRCm39) D298N probably benign Het
Fyb1 T G 15: 6,688,040 (GRCm39) V800G possibly damaging Het
Gcm1 T C 9: 77,971,844 (GRCm39) F262L probably benign Het
Gm21983 T C 7: 26,879,605 (GRCm39) M121V probably benign Het
Gm9996 A T 10: 29,019,657 (GRCm39) probably benign Het
Gstm3 A T 3: 107,876,074 (GRCm39) probably benign Het
Gsto2 G T 19: 47,863,398 (GRCm39) E91D probably damaging Het
Hs6st3 G T 14: 119,376,492 (GRCm39) M222I possibly damaging Het
Ighv3-6 T C 12: 114,251,850 (GRCm39) D90G probably damaging Het
Itgb1bp1 C T 12: 21,326,854 (GRCm39) A40T possibly damaging Het
Kcns3 C T 12: 11,141,872 (GRCm39) E276K probably benign Het
Lamc3 C T 2: 31,813,034 (GRCm39) R1007C probably damaging Het
Lnx2 A T 5: 146,978,877 (GRCm39) M125K probably damaging Het
Lyst T A 13: 13,812,643 (GRCm39) N1018K probably benign Het
Mctp2 T A 7: 71,895,290 (GRCm39) S186C probably damaging Het
Or1j20 A T 2: 36,759,871 (GRCm39) T98S probably benign Het
Polg T C 7: 79,109,519 (GRCm39) T433A possibly damaging Het
Rdh13 C T 7: 4,438,059 (GRCm39) V127M probably damaging Het
Rdh16 A G 10: 127,649,470 (GRCm39) T309A probably benign Het
Reep5 A T 18: 34,506,312 (GRCm39) D21E probably benign Het
Rptn A T 3: 93,304,227 (GRCm39) N520I probably benign Het
Rttn T C 18: 89,047,122 (GRCm39) L928P probably damaging Het
Slc44a2 A G 9: 21,254,273 (GRCm39) I212V probably benign Het
Snupn A G 9: 56,870,332 (GRCm39) T71A probably benign Het
Ssu2 T C 6: 112,359,353 (GRCm39) N89S probably benign Het
Thsd7a A G 6: 12,321,071 (GRCm39) S1535P probably damaging Het
Tmt1a C A 15: 100,202,933 (GRCm39) S51* probably null Het
Uba7 A T 9: 107,858,715 (GRCm39) S849C probably benign Het
Wdr6 A G 9: 108,455,743 (GRCm39) I17T probably benign Het
Xkr9 G A 1: 13,771,173 (GRCm39) V230I probably benign Het
Other mutations in Vmn2r80
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01084:Vmn2r80 APN 10 79,030,433 (GRCm39) missense probably damaging 1.00
IGL01325:Vmn2r80 APN 10 79,030,081 (GRCm39) missense possibly damaging 0.62
IGL01611:Vmn2r80 APN 10 79,007,488 (GRCm39) missense probably damaging 1.00
IGL01799:Vmn2r80 APN 10 79,007,385 (GRCm39) missense possibly damaging 0.95
IGL01877:Vmn2r80 APN 10 79,007,334 (GRCm39) splice site probably null
IGL02673:Vmn2r80 APN 10 79,005,318 (GRCm39) missense probably benign 0.02
IGL02756:Vmn2r80 APN 10 79,030,145 (GRCm39) missense probably damaging 1.00
IGL03382:Vmn2r80 APN 10 79,005,362 (GRCm39) missense probably damaging 1.00
R0071:Vmn2r80 UTSW 10 79,007,566 (GRCm39) missense possibly damaging 0.83
R0071:Vmn2r80 UTSW 10 79,007,566 (GRCm39) missense possibly damaging 0.83
R0129:Vmn2r80 UTSW 10 79,005,330 (GRCm39) missense probably damaging 1.00
R0325:Vmn2r80 UTSW 10 78,984,773 (GRCm39) missense possibly damaging 0.89
R0567:Vmn2r80 UTSW 10 79,030,665 (GRCm39) missense possibly damaging 0.89
R1510:Vmn2r80 UTSW 10 79,005,553 (GRCm39) missense possibly damaging 0.69
R1519:Vmn2r80 UTSW 10 79,030,053 (GRCm39) missense probably damaging 1.00
R1520:Vmn2r80 UTSW 10 79,030,594 (GRCm39) missense probably damaging 1.00
R1627:Vmn2r80 UTSW 10 79,030,249 (GRCm39) missense probably damaging 1.00
R1709:Vmn2r80 UTSW 10 79,030,223 (GRCm39) missense probably benign 0.04
R2116:Vmn2r80 UTSW 10 79,030,558 (GRCm39) missense probably benign 0.09
R2237:Vmn2r80 UTSW 10 79,004,104 (GRCm39) missense probably damaging 1.00
R2308:Vmn2r80 UTSW 10 79,007,455 (GRCm39) missense probably damaging 1.00
R2893:Vmn2r80 UTSW 10 78,984,699 (GRCm39) missense possibly damaging 0.63
R3408:Vmn2r80 UTSW 10 79,004,227 (GRCm39) missense possibly damaging 0.95
R4502:Vmn2r80 UTSW 10 78,984,764 (GRCm39) missense probably benign 0.00
R4685:Vmn2r80 UTSW 10 79,030,162 (GRCm39) missense possibly damaging 0.95
R4851:Vmn2r80 UTSW 10 79,030,156 (GRCm39) missense possibly damaging 0.68
R4947:Vmn2r80 UTSW 10 79,030,532 (GRCm39) missense probably damaging 1.00
R5112:Vmn2r80 UTSW 10 79,030,292 (GRCm39) missense possibly damaging 0.61
R5217:Vmn2r80 UTSW 10 79,004,980 (GRCm39) missense possibly damaging 0.62
R5226:Vmn2r80 UTSW 10 79,029,874 (GRCm39) missense probably benign 0.36
R5512:Vmn2r80 UTSW 10 79,004,066 (GRCm39) missense probably benign 0.00
R5618:Vmn2r80 UTSW 10 78,984,755 (GRCm39) missense probably benign
R5959:Vmn2r80 UTSW 10 79,005,313 (GRCm39) missense probably benign 0.00
R6104:Vmn2r80 UTSW 10 78,984,854 (GRCm39) missense probably benign 0.00
R6110:Vmn2r80 UTSW 10 79,017,837 (GRCm39) missense probably damaging 1.00
R6270:Vmn2r80 UTSW 10 79,030,159 (GRCm39) missense probably benign 0.00
R6508:Vmn2r80 UTSW 10 79,030,290 (GRCm39) missense probably benign 0.03
R6843:Vmn2r80 UTSW 10 79,005,502 (GRCm39) missense probably benign 0.08
R6894:Vmn2r80 UTSW 10 79,005,438 (GRCm39) missense probably benign 0.06
R7048:Vmn2r80 UTSW 10 79,030,153 (GRCm39) missense probably damaging 1.00
R7149:Vmn2r80 UTSW 10 79,030,654 (GRCm39) missense probably benign 0.00
R7262:Vmn2r80 UTSW 10 79,005,579 (GRCm39) missense probably damaging 0.98
R7559:Vmn2r80 UTSW 10 79,030,459 (GRCm39) missense probably benign 0.00
R7622:Vmn2r80 UTSW 10 79,030,097 (GRCm39) missense probably damaging 1.00
R8003:Vmn2r80 UTSW 10 78,984,711 (GRCm39) missense probably benign 0.16
R8207:Vmn2r80 UTSW 10 79,030,150 (GRCm39) nonsense probably null
R8330:Vmn2r80 UTSW 10 79,007,550 (GRCm39) missense probably damaging 1.00
R8337:Vmn2r80 UTSW 10 78,984,707 (GRCm39) missense probably benign 0.00
R8354:Vmn2r80 UTSW 10 78,984,710 (GRCm39) missense probably benign
R8688:Vmn2r80 UTSW 10 79,004,069 (GRCm39) missense probably damaging 1.00
R8903:Vmn2r80 UTSW 10 79,017,928 (GRCm39) missense probably damaging 1.00
R9088:Vmn2r80 UTSW 10 79,005,378 (GRCm39) missense probably benign 0.05
R9125:Vmn2r80 UTSW 10 78,984,760 (GRCm39) missense probably benign 0.12
R9147:Vmn2r80 UTSW 10 79,030,687 (GRCm39) missense probably damaging 0.98
R9148:Vmn2r80 UTSW 10 79,030,687 (GRCm39) missense probably damaging 0.98
R9187:Vmn2r80 UTSW 10 79,030,438 (GRCm39) missense probably benign 0.20
R9218:Vmn2r80 UTSW 10 79,030,270 (GRCm39) missense possibly damaging 0.61
R9553:Vmn2r80 UTSW 10 78,984,743 (GRCm39) missense probably benign
R9612:Vmn2r80 UTSW 10 79,030,712 (GRCm39) missense probably damaging 1.00
R9677:Vmn2r80 UTSW 10 78,984,672 (GRCm39) missense probably benign 0.15
R9769:Vmn2r80 UTSW 10 79,005,443 (GRCm39) missense probably damaging 1.00
Z1176:Vmn2r80 UTSW 10 79,030,441 (GRCm39) missense probably damaging 1.00
Z1176:Vmn2r80 UTSW 10 79,030,232 (GRCm39) missense possibly damaging 0.65
Z1176:Vmn2r80 UTSW 10 79,005,311 (GRCm39) missense not run
Z1176:Vmn2r80 UTSW 10 79,030,605 (GRCm39) missense probably damaging 1.00
Z1177:Vmn2r80 UTSW 10 79,005,311 (GRCm39) missense not run
Posted On 2015-12-18