Incidental Mutation 'IGL02861:Cdc27'
ID362179
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Cdc27
Ensembl Gene ENSMUSG00000020687
Gene Namecell division cycle 27
SynonymsAPC3
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.969) question?
Stock #IGL02861
Quality Score
Status
Chromosome11
Chromosomal Location104502745-104550620 bp(-) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) A to T at 104522831 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000102575 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000093923] [ENSMUST00000106961] [ENSMUST00000106962]
Predicted Effect probably benign
Transcript: ENSMUST00000093923
SMART Domains Protein: ENSMUSP00000091452
Gene: ENSMUSG00000020687

DomainStartEndE-ValueType
Pfam:Apc3 17 95 2.2e-23 PFAM
TPR 115 148 4.45e-2 SMART
low complexity region 349 362 N/A INTRINSIC
TPR 500 533 1.33e1 SMART
TPR 568 601 2.91e-6 SMART
TPR 602 635 7.06e-5 SMART
TPR 636 669 3.96e-8 SMART
TPR 670 703 7.45e-4 SMART
TPR 704 737 6.92e1 SMART
TPR 738 771 1.17e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000106961
SMART Domains Protein: ENSMUSP00000102574
Gene: ENSMUSG00000020687

DomainStartEndE-ValueType
Pfam:Apc3 17 95 1.9e-23 PFAM
Pfam:TPR_2 115 148 9.2e-5 PFAM
Pfam:TPR_1 116 148 9.1e-5 PFAM
low complexity region 355 368 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000106962
SMART Domains Protein: ENSMUSP00000102575
Gene: ENSMUSG00000020687

DomainStartEndE-ValueType
Pfam:ANAPC3 17 94 7.7e-25 PFAM
TPR 115 148 4.45e-2 SMART
low complexity region 355 368 N/A INTRINSIC
TPR 506 539 1.33e1 SMART
TPR 574 607 2.91e-6 SMART
TPR 608 641 7.06e-5 SMART
TPR 642 675 3.96e-8 SMART
TPR 676 709 7.45e-4 SMART
TPR 710 743 6.92e1 SMART
TPR 744 777 1.17e-1 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene shares strong similarity with Saccharomyces cerevisiae protein Cdc27, and the gene product of Schizosaccharomyces pombe nuc 2. This protein is a component of the anaphase-promoting complex (APC), which is composed of eight protein subunits and is highly conserved in eukaryotic cells. This complex catalyzes the formation of cyclin B-ubiquitin conjugate, which is responsible for the ubiquitin-mediated proteolysis of B-type cyclins. The protein encoded by this gene and three other members of the APC complex contain tetratricopeptide (TPR) repeats, which are important for protein-protein interactions. This protein was shown to interact with mitotic checkpoint proteins including Mad2, p55CDC and BUBR1, and it may thus be involved in controlling the timing of mitosis. Alternative splicing of this gene results in multiple transcript variants. Related pseudogenes have been identified on chromosomes 2, 22 and Y. [provided by RefSeq, May 2014]
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930486L24Rik A T 13: 60,853,332 probably benign Het
6430548M08Rik G A 8: 120,150,124 R157H probably damaging Het
Amer3 A G 1: 34,588,125 K482E probably damaging Het
Ankrd11 A T 8: 122,895,827 S429T probably damaging Het
Ano3 T A 2: 110,738,812 N125I probably damaging Het
BC106179 T A 16: 23,223,996 probably benign Het
Bclaf3 T C X: 159,555,528 I457T possibly damaging Het
Cbr3 T G 16: 93,685,119 V121G probably damaging Het
Cd44 A G 2: 102,832,481 probably null Het
Cd72 G A 4: 43,448,332 A316V probably benign Het
Cdon A T 9: 35,486,957 Q990L probably damaging Het
Clk2 T C 3: 89,173,399 W231R probably damaging Het
Cpsf2 G A 12: 101,999,566 V597I probably benign Het
D630003M21Rik A G 2: 158,200,998 V874A probably benign Het
Daam2 A G 17: 49,469,427 F811L probably damaging Het
Ddx54 T C 5: 120,618,130 probably benign Het
Dysf T A 6: 84,039,537 L59Q probably damaging Het
Eps8 A G 6: 137,499,599 Y601H probably damaging Het
Faf2 T C 13: 54,648,422 Y131H probably damaging Het
Hectd4 T A 5: 121,307,004 D101E possibly damaging Het
Hk2 T C 6: 82,760,158 T30A possibly damaging Het
Il27 A T 7: 126,592,649 L77Q probably damaging Het
Klhdc1 T A 12: 69,251,451 V83D possibly damaging Het
Manba T G 3: 135,570,263 S822A probably benign Het
Mterf2 A C 10: 85,120,331 V143G probably damaging Het
Ncapd3 A G 9: 27,069,899 D895G probably benign Het
Olfr1220 T A 2: 89,097,457 I157L probably benign Het
Olfr429 T A 1: 174,089,036 probably benign Het
Panx1 T C 9: 15,007,805 K253E probably benign Het
Phc1 T A 6: 122,323,789 probably benign Het
Pkd1l2 G A 8: 117,065,745 T436I probably benign Het
Ptchd4 A G 17: 42,377,317 E250G probably damaging Het
Rp1 G T 1: 4,346,152 S1579* probably null Het
Rrp1 A G 10: 78,409,222 probably benign Het
Ryr3 A G 2: 112,652,841 L4187P possibly damaging Het
Serpinc1 A T 1: 160,999,991 I387F probably damaging Het
Slc2a7 G A 4: 150,168,379 C492Y probably benign Het
Slf1 A G 13: 77,126,359 probably benign Het
Spta1 T A 1: 174,211,598 L1169Q probably damaging Het
Stap1 T A 5: 86,071,965 probably benign Het
Taf6 A G 5: 138,183,885 L66P probably damaging Het
Ttn T C 2: 76,802,497 E14071G probably damaging Het
Unk A G 11: 116,056,299 H586R possibly damaging Het
Zfpm2 A C 15: 41,103,266 K917T probably damaging Het
Other mutations in Cdc27
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00505:Cdc27 APN 11 104521432 missense probably benign 0.01
IGL00673:Cdc27 APN 11 104528435 missense probably damaging 1.00
IGL00949:Cdc27 APN 11 104529403 missense probably damaging 1.00
IGL01529:Cdc27 APN 11 104507216 missense probably damaging 1.00
IGL01894:Cdc27 APN 11 104526921 missense probably benign 0.00
IGL02096:Cdc27 APN 11 104528568 splice site probably benign
IGL02124:Cdc27 APN 11 104522731 missense probably damaging 0.99
IGL02444:Cdc27 APN 11 104522716 splice site probably benign
IGL02589:Cdc27 APN 11 104505644 missense probably benign 0.04
IGL02851:Cdc27 APN 11 104526981 splice site probably benign
IGL02952:Cdc27 APN 11 104517464 missense probably damaging 1.00
IGL03103:Cdc27 APN 11 104512980 missense probably benign 0.21
R0344:Cdc27 UTSW 11 104526991 splice site probably benign
R0365:Cdc27 UTSW 11 104528424 missense possibly damaging 0.68
R0366:Cdc27 UTSW 11 104505648 missense probably damaging 0.99
R0426:Cdc27 UTSW 11 104513027 splice site probably null
R0505:Cdc27 UTSW 11 104528288 missense probably benign
R0639:Cdc27 UTSW 11 104531734 missense probably damaging 1.00
R0925:Cdc27 UTSW 11 104526049 critical splice donor site probably null
R0927:Cdc27 UTSW 11 104505641 missense possibly damaging 0.88
R1414:Cdc27 UTSW 11 104521425 missense probably benign 0.26
R1765:Cdc27 UTSW 11 104534781 missense probably damaging 1.00
R1822:Cdc27 UTSW 11 104522822 missense probably benign 0.16
R2449:Cdc27 UTSW 11 104505638 missense probably benign 0.03
R3404:Cdc27 UTSW 11 104507200 missense probably damaging 1.00
R3405:Cdc27 UTSW 11 104507200 missense probably damaging 1.00
R3406:Cdc27 UTSW 11 104507200 missense probably damaging 1.00
R3776:Cdc27 UTSW 11 104515437 missense probably damaging 1.00
R4037:Cdc27 UTSW 11 104507207 missense probably damaging 1.00
R4385:Cdc27 UTSW 11 104534814 missense probably benign 0.10
R4451:Cdc27 UTSW 11 104517395 missense probably benign 0.05
R4452:Cdc27 UTSW 11 104517395 missense probably benign 0.05
R4530:Cdc27 UTSW 11 104528426 missense possibly damaging 0.68
R4956:Cdc27 UTSW 11 104529395 missense probably damaging 0.99
R4988:Cdc27 UTSW 11 104526124 missense possibly damaging 0.95
R5098:Cdc27 UTSW 11 104507287 missense probably damaging 1.00
R5130:Cdc27 UTSW 11 104534774 missense probably benign 0.07
R5384:Cdc27 UTSW 11 104507140 missense probably benign 0.02
R5876:Cdc27 UTSW 11 104515418 missense probably benign 0.30
R6238:Cdc27 UTSW 11 104528444 missense probably damaging 1.00
R6318:Cdc27 UTSW 11 104528694 missense probably damaging 1.00
R6354:Cdc27 UTSW 11 104534748 missense probably damaging 1.00
R6467:Cdc27 UTSW 11 104522776 missense probably damaging 1.00
R6485:Cdc27 UTSW 11 104505648 missense probably benign 0.15
Posted On2015-12-18