Incidental Mutation 'IGL02895:Odam'
ID |
363373 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Odam
|
Ensembl Gene |
ENSMUSG00000009580 |
Gene Name |
odontogenic, ameloblast asssociated |
Synonyms |
2310011G06Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.108)
|
Stock # |
IGL02895
|
Quality Score |
|
Status
|
|
Chromosome |
5 |
Chromosomal Location |
88032888-88042033 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 88033723 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Arginine
at position 21
(Q21R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000117898
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000113274]
[ENSMUST00000129757]
|
AlphaFold |
A1E960 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000113274
AA Change: Q21R
PolyPhen 2
Score 0.317 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000108899 Gene: ENSMUSG00000009580 AA Change: Q21R
Domain | Start | End | E-Value | Type |
Pfam:ODAM
|
16 |
273 |
1.4e-128 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000129757
AA Change: Q21R
PolyPhen 2
Score 0.317 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000117898 Gene: ENSMUSG00000009580 AA Change: Q21R
Domain | Start | End | E-Value | Type |
Pfam:ODAM
|
16 |
273 |
5.1e-132 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 19 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Ahctf1 |
C |
T |
1: 179,621,376 (GRCm39) |
E130K |
probably damaging |
Het |
Atf7ip |
C |
A |
6: 136,537,686 (GRCm39) |
S306R |
probably damaging |
Het |
Cpd |
A |
G |
11: 76,676,029 (GRCm39) |
V1208A |
probably benign |
Het |
Cplane1 |
A |
G |
15: 8,261,591 (GRCm39) |
|
probably benign |
Het |
Ctsl |
C |
T |
13: 64,514,326 (GRCm39) |
A195T |
probably damaging |
Het |
Dennd2c |
T |
C |
3: 103,044,519 (GRCm39) |
Y367H |
possibly damaging |
Het |
Endod1 |
T |
A |
9: 14,268,166 (GRCm39) |
T440S |
probably benign |
Het |
Gm12695 |
T |
C |
4: 96,612,186 (GRCm39) |
R526G |
probably damaging |
Het |
Ighv1-39 |
T |
C |
12: 114,878,302 (GRCm39) |
T90A |
probably damaging |
Het |
Kdm2a |
G |
A |
19: 4,412,930 (GRCm39) |
R19C |
probably damaging |
Het |
Klra1 |
C |
T |
6: 130,352,203 (GRCm39) |
E180K |
possibly damaging |
Het |
Or4c11c |
A |
G |
2: 88,661,986 (GRCm39) |
Y175C |
probably damaging |
Het |
Or8b8 |
G |
A |
9: 37,809,278 (GRCm39) |
V193I |
probably benign |
Het |
Plk1 |
A |
G |
7: 121,768,389 (GRCm39) |
E504G |
possibly damaging |
Het |
Rtl3 |
T |
C |
X: 105,883,150 (GRCm39) |
I37M |
possibly damaging |
Het |
Srebf2 |
A |
G |
15: 82,031,668 (GRCm39) |
E22G |
possibly damaging |
Het |
Tmem74b |
A |
G |
2: 151,548,311 (GRCm39) |
S13G |
probably benign |
Het |
Utp14b |
T |
C |
1: 78,642,324 (GRCm39) |
V74A |
possibly damaging |
Het |
Znrf3 |
T |
C |
11: 5,239,085 (GRCm39) |
M93V |
probably damaging |
Het |
|
Other mutations in Odam |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00970:Odam
|
APN |
5 |
88,034,467 (GRCm39) |
splice site |
probably benign |
|
IGL01339:Odam
|
APN |
5 |
88,033,755 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01940:Odam
|
APN |
5 |
88,035,192 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL03051:Odam
|
APN |
5 |
88,040,335 (GRCm39) |
splice site |
probably benign |
|
IGL03118:Odam
|
APN |
5 |
88,033,613 (GRCm39) |
missense |
unknown |
|
BB005:Odam
|
UTSW |
5 |
88,035,269 (GRCm39) |
missense |
possibly damaging |
0.95 |
BB015:Odam
|
UTSW |
5 |
88,035,269 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1816:Odam
|
UTSW |
5 |
88,037,329 (GRCm39) |
splice site |
probably null |
|
R2033:Odam
|
UTSW |
5 |
88,040,278 (GRCm39) |
missense |
probably benign |
|
R4965:Odam
|
UTSW |
5 |
88,037,967 (GRCm39) |
nonsense |
probably null |
|
R7257:Odam
|
UTSW |
5 |
88,035,404 (GRCm39) |
missense |
probably benign |
0.14 |
R7682:Odam
|
UTSW |
5 |
88,040,287 (GRCm39) |
missense |
possibly damaging |
0.71 |
R7928:Odam
|
UTSW |
5 |
88,035,269 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8099:Odam
|
UTSW |
5 |
88,040,299 (GRCm39) |
missense |
possibly damaging |
0.52 |
R8844:Odam
|
UTSW |
5 |
88,037,322 (GRCm39) |
missense |
probably damaging |
0.98 |
R8872:Odam
|
UTSW |
5 |
88,035,797 (GRCm39) |
critical splice acceptor site |
probably null |
|
R9006:Odam
|
UTSW |
5 |
88,040,298 (GRCm39) |
missense |
probably benign |
0.16 |
R9227:Odam
|
UTSW |
5 |
88,034,457 (GRCm39) |
missense |
probably benign |
0.32 |
R9230:Odam
|
UTSW |
5 |
88,034,457 (GRCm39) |
missense |
probably benign |
0.32 |
R9705:Odam
|
UTSW |
5 |
88,037,228 (GRCm39) |
missense |
probably benign |
0.06 |
R9779:Odam
|
UTSW |
5 |
88,037,327 (GRCm39) |
critical splice donor site |
probably null |
|
|
Posted On |
2015-12-18 |