Incidental Mutation 'IGL02959:Tbca'
ID 365247
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tbca
Ensembl Gene ENSMUSG00000042043
Gene Name tubulin cofactor A
Synonyms co-chaperonin associated with a- & b-tubulin, cofactor A, Tbca13
Accession Numbers
Essential gene? Probably essential (E-score: 0.960) question?
Stock # IGL02959
Quality Score
Status
Chromosome 13
Chromosomal Location 94925428-94979431 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 94979203 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Cysteine at position 74 (R74C)
Ref Sequence ENSEMBL: ENSMUSP00000152268 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000046644] [ENSMUST00000220819] [ENSMUST00000220825]
AlphaFold P48428
Predicted Effect probably benign
Transcript: ENSMUST00000046644
AA Change: R98C

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
SMART Domains Protein: ENSMUSP00000038781
Gene: ENSMUSG00000042043
AA Change: R98C

DomainStartEndE-ValueType
Pfam:TBCA 9 95 8.4e-35 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000220561
Predicted Effect probably benign
Transcript: ENSMUST00000220819
Predicted Effect probably benign
Transcript: ENSMUST00000220825
AA Change: R74C

PolyPhen 2 Score 0.021 (Sensitivity: 0.95; Specificity: 0.80)
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The product of this gene is one of four proteins (cofactors A, D, E, and C) involved in the pathway leading to correctly folded beta-tubulin from folding intermediates. Cofactors A and D are believed to play a role in capturing and stabilizing beta-tubulin intermediates in a quasi-native confirmation. Cofactor E binds to the cofactor D/beta-tubulin complex; interaction with cofactor C then causes the release of beta-tubulin polypeptides that are committed to the native state. This gene encodes chaperonin cofactor A. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2014]
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2ml1 G T 6: 128,544,023 (GRCm39) A506D probably benign Het
Agap1 G T 1: 89,770,913 (GRCm39) V635L possibly damaging Het
Akr1c12 T C 13: 4,329,331 (GRCm39) K9E probably benign Het
Alms1 T A 6: 85,606,034 (GRCm39) Y2561* probably null Het
Atm T C 9: 53,382,718 (GRCm39) H1957R probably damaging Het
Bcr T C 10: 74,996,222 (GRCm39) F922S probably benign Het
Cfap44 T A 16: 44,291,230 (GRCm39) probably benign Het
Chil5 A G 3: 105,926,906 (GRCm39) V243A probably damaging Het
Csmd1 A G 8: 15,960,465 (GRCm39) C3317R probably damaging Het
Dsc1 T C 18: 20,241,942 (GRCm39) K133R probably damaging Het
Ecm1 T A 3: 95,644,989 (GRCm39) Q136L probably damaging Het
Fscn3 C A 6: 28,435,997 (GRCm39) A431E possibly damaging Het
Gas7 C T 11: 67,565,061 (GRCm39) probably benign Het
Gbx2 A G 1: 89,856,517 (GRCm39) V291A probably damaging Het
Hipk3 G A 2: 104,301,604 (GRCm39) T196M probably damaging Het
Il20ra T A 10: 19,634,789 (GRCm39) N343K probably benign Het
Il24 C T 1: 130,813,470 (GRCm39) W42* probably null Het
Kif13b A T 14: 65,005,166 (GRCm39) I1153F probably damaging Het
Krt1c A T 15: 101,719,763 (GRCm39) S636T unknown Het
Or11g24 A T 14: 50,662,389 (GRCm39) M138L possibly damaging Het
Or13a25 C T 7: 140,247,463 (GRCm39) P81S probably damaging Het
Or14c40 T C 7: 86,313,737 (GRCm39) F289S probably damaging Het
Or4k52 T A 2: 111,610,955 (GRCm39) C97S probably damaging Het
Or6d15 A T 6: 116,559,505 (GRCm39) M134K probably damaging Het
Osmr T C 15: 6,845,378 (GRCm39) D796G possibly damaging Het
Peli2 A T 14: 48,477,754 (GRCm39) T99S probably benign Het
Pi4k2a A T 19: 42,101,510 (GRCm39) K317N probably benign Het
Pik3r1 T G 13: 101,894,037 (GRCm39) D44A probably benign Het
Pkhd1 G T 1: 20,678,640 (GRCm39) S96* probably null Het
Plekha5 A G 6: 140,489,904 (GRCm39) E9G probably damaging Het
Plekha8 T C 6: 54,592,254 (GRCm39) F71S probably damaging Het
Polq G T 16: 36,906,928 (GRCm39) L2296F probably damaging Het
Rbm5 G A 9: 107,631,384 (GRCm39) probably benign Het
Rc3h2 T C 2: 37,295,366 (GRCm39) K217E probably damaging Het
Scrib A G 15: 75,937,056 (GRCm39) L350P probably damaging Het
Slc4a10 T A 2: 62,098,487 (GRCm39) S540R probably damaging Het
Smc3 G T 19: 53,611,988 (GRCm39) V354L probably benign Het
Smurf1 T A 5: 144,836,199 (GRCm39) I105F probably damaging Het
Stx7 G T 10: 24,031,247 (GRCm39) R17L probably benign Het
Tmem92 T C 11: 94,669,504 (GRCm39) Q153R possibly damaging Het
Trim41 C A 11: 48,698,307 (GRCm39) G553V probably damaging Het
Trim75 A T 8: 65,435,417 (GRCm39) N344K possibly damaging Het
Tsr1 A G 11: 74,791,075 (GRCm39) D218G probably benign Het
Ubr2 A C 17: 47,286,877 (GRCm39) V474G probably damaging Het
Unc45a T G 7: 79,982,721 (GRCm39) probably benign Het
Zfp609 C T 9: 65,610,675 (GRCm39) A763T probably benign Het
Other mutations in Tbca
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4833:Tbca UTSW 13 94,968,918 (GRCm39) missense probably benign 0.09
R7471:Tbca UTSW 13 94,968,923 (GRCm39) missense probably damaging 1.00
Posted On 2015-12-18