Mutagenetix > Incidental Mutation

Incidental Mutation 'R4774:Fnip2'

367739

Institutional Source

Beutler Lab

Gene Symbol

Fnip2

Ensembl Gene

ENSMUSG00000061175

Gene Name

folliculin interacting protein 2

Synonyms

D630023B12Rik

MMRRC Submission

042412-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R4774 (G1)

Quality Score

175

Status

Validated

Chromosome

Chromosomal Location

79363281-79475103 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

C to A at 79373028 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Stop codon at position 1017 (E1017*)

Ref Sequence

ENSEMBL: ENSMUSP00000115275 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000076136] [ENSMUST00000133154] [ENSMUST00000164216]

AlphaFold

Q80TD3

Predicted Effect

probably null
Transcript: ENSMUST00000076136
AA Change: E987*

SMART Domains

Protein: ENSMUSP00000075497
Gene: ENSMUSG00000061175
AA Change: E987*

Domain	Start	End	E-Value	Type
Pfam:FNIP_N	42	168	4.3e-39	PFAM
low complexity region	240	261	N/A	INTRINSIC
Pfam:FNIP_M	289	528	5.9e-92	PFAM
low complexity region	557	571	N/A	INTRINSIC
low complexity region	748	755	N/A	INTRINSIC
Pfam:FNIP_C	920	1104	4.1e-73	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000133154
AA Change: E1017*

SMART Domains

Protein: ENSMUSP00000115275
Gene: ENSMUSG00000061175
AA Change: E1017*

Domain	Start	End	E-Value	Type
Pfam:FNIP_N	42	164	5.2e-34	PFAM
low complexity region	270	291	N/A	INTRINSIC
Pfam:FNIP_M	323	557	3.9e-93	PFAM
low complexity region	587	601	N/A	INTRINSIC
low complexity region	778	785	N/A	INTRINSIC
Pfam:FNIP_C	951	1134	2.3e-74	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000149475

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000154645

Predicted Effect

probably benign
Transcript: ENSMUST00000164216

SMART Domains

Protein: ENSMUSP00000130702
Gene: ENSMUSG00000091685

Domain	Start	End	E-Value	Type
Pfam:DUF4562	18	132	1.1e-59	PFAM

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.7%
20x: 93.9%

Validation Efficiency

98% (97/99)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the folliculin-interacting protein family. The encoded protein binds to the tumor suppressor folliculin and to AMP-activated protein kinase (AMPK) and be involved in regulating the O6-methylguanine-induced apoptosis signaling pathway. This protein may also play a role cellular metabolism and nutrient sensing by regulating the AMPK-mechanistic target of rapamycin signaling pathway. A homologous binding partner of this protein, folliculin-interacting protein 1, has similar binding activities and may suggest functional redundancy within this protein family. Both folliculin-interacting proteins have also been shown to bind the molecular chaperone heat shock protein-90 (Hsp90) and they may function as a co-chaperones in the stabilization of tumor suppressor folliculin which is a target of Hsp90 chaperone activity. [provided by RefSeq, Sep 2016]
PHENOTYPE: Mice homozygous for a null allele have normal lifespans. Mice with combined loss of this gene and a single null allele of Fnip1 develop kidney cancer. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 85 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc9	T	C	6: 142,585,043 (GRCm39)	I844V	probably damaging	Het
Acnat1	T	A	4: 49,450,784 (GRCm39)	Y109F	probably benign	Het
Alox12b	T	C	11: 69,054,033 (GRCm39)	V205A	probably benign	Het
Arl6ip1	G	A	7: 117,721,208 (GRCm39)	R77C	probably damaging	Het
Atp8b1	A	G	18: 64,666,730 (GRCm39)	C1156R	possibly damaging	Het
Atp8b3	A	C	10: 80,372,156 (GRCm39)	N24K	probably damaging	Het
Bdh1	T	C	16: 31,273,954 (GRCm39)	V209A	possibly damaging	Het
Blm	A	T	7: 80,113,596 (GRCm39)	C1234S	probably damaging	Het
Caml	A	G	13: 55,779,740 (GRCm39)	D271G	possibly damaging	Het
Capn11	T	C	17: 45,944,006 (GRCm39)	D545G	probably benign	Het
Catspere1	T	C	1: 177,765,304 (GRCm39)		noncoding transcript	Het
Cep128	T	C	12: 91,200,969 (GRCm39)	E347G	probably damaging	Het
Cngb3	A	G	4: 19,415,713 (GRCm39)	T408A	possibly damaging	Het
Coa8	A	G	12: 111,679,823 (GRCm39)	T33A	possibly damaging	Het
Cog1	G	A	11: 113,548,253 (GRCm39)	R18Q	possibly damaging	Het
Cps1	T	C	1: 67,259,671 (GRCm39)	F1338L	probably damaging	Het
Csmd1	T	C	8: 16,059,369 (GRCm39)	H2122R	probably benign	Het
Ctu2	T	G	8: 123,207,851 (GRCm39)	S26A	probably benign	Het
Dbf4	G	A	5: 8,453,062 (GRCm39)		probably benign	Het
Ddx23	A	T	15: 98,545,116 (GRCm39)	D663E	probably benign	Het
Dpep2	T	C	8: 106,717,388 (GRCm39)	T123A	possibly damaging	Het
Eed	A	G	7: 89,613,976 (GRCm39)	I274T	probably damaging	Het
Eif3b	A	G	5: 140,405,255 (GRCm39)	D47G	probably benign	Het
Epas1	T	C	17: 87,113,186 (GRCm39)	V124A	probably damaging	Het
Fer1l6	T	C	15: 58,449,798 (GRCm39)	L668P	probably damaging	Het
Gm43517	A	T	12: 49,436,690 (GRCm39)		probably benign	Het
Got1	A	G	19: 43,491,345 (GRCm39)		probably null	Het
H2-Eb2	T	A	17: 34,553,375 (GRCm39)	V187E	probably damaging	Het
H2-Q1	T	C	17: 35,540,242 (GRCm39)		probably benign	Het
Hpgd	T	C	8: 56,751,454 (GRCm39)	V94A	probably damaging	Het
Htra1	T	A	7: 130,586,756 (GRCm39)	N446K	probably benign	Het
Igkv3-4	T	A	6: 70,649,269 (GRCm39)	S89R	probably damaging	Het
Immt	C	T	6: 71,829,720 (GRCm39)	T142I	probably damaging	Het
Itpkb	C	A	1: 180,245,759 (GRCm39)	P759T	probably damaging	Het
Jmjd1c	G	A	10: 67,060,571 (GRCm39)	V688I	possibly damaging	Het
Kbtbd13	G	T	9: 65,298,025 (GRCm39)	R304S	probably benign	Het
Lama5	A	C	2: 179,827,734 (GRCm39)	L2176R	probably damaging	Het
Lrp1b	G	C	2: 40,551,544 (GRCm39)	L418V	probably null	Het
Lrrc4b	C	A	7: 44,111,796 (GRCm39)		probably null	Het
Lyst	A	G	13: 13,915,182 (GRCm39)	N3292S	probably damaging	Het
Mep1b	A	T	18: 21,219,241 (GRCm39)	I132F	probably benign	Het
Mettl2	A	G	11: 105,017,436 (GRCm39)		probably null	Het
Nherf2	T	C	17: 24,863,873 (GRCm39)	M1V	probably null	Het
Niban1	A	T	1: 151,591,445 (GRCm39)	D529V	probably damaging	Het
Nmd3	T	C	3: 69,652,569 (GRCm39)	L385S	probably benign	Het
Nol4	T	C	18: 23,045,683 (GRCm39)	E243G	probably damaging	Het
Odad1	T	A	7: 45,597,804 (GRCm39)	S571R	probably damaging	Het
Or4l1	T	A	14: 50,166,726 (GRCm39)	I92F	probably damaging	Het
Or51k1	A	G	7: 103,661,795 (GRCm39)	I38T	probably benign	Het
Or5j3	A	T	2: 86,129,042 (GRCm39)	N294I	possibly damaging	Het
Or8b52	A	G	9: 38,576,519 (GRCm39)	I207T	probably benign	Het
Pcnp	A	G	16: 55,837,522 (GRCm39)		probably benign	Het
Pla2g6	A	C	15: 79,171,818 (GRCm39)	C680G	probably damaging	Het
Plekha7	G	T	7: 115,744,178 (GRCm39)	D661E	probably damaging	Het
Prim1	A	T	10: 127,862,887 (GRCm39)		probably benign	Het
Psg29	T	A	7: 16,944,460 (GRCm39)	N323K	probably benign	Het
Ptrh2	G	A	11: 86,580,833 (GRCm39)	R150H	probably damaging	Het
Rasa1	A	G	13: 85,398,621 (GRCm39)		probably benign	Het
Rasa3	T	C	8: 13,627,501 (GRCm39)	D667G	probably benign	Het
Rnase2a	T	C	14: 51,493,201 (GRCm39)	N55D	probably damaging	Het
Rsf1	GCGGCGGCGGCGGCGGCGGC	GCGGCGGCGGCGGCGGCGGCGGCGGCGGC	7: 97,229,123 (GRCm39)		probably benign	Het
Sbp	T	A	17: 24,164,218 (GRCm39)	N133K	probably damaging	Het
Scml4	A	G	10: 42,833,743 (GRCm39)		probably benign	Het
Sema5b	T	A	16: 35,483,552 (GRCm39)	N1063K	probably damaging	Het
Serpind1	C	T	16: 17,154,272 (GRCm39)	T33M	probably benign	Het
Shroom3	G	T	5: 93,090,945 (GRCm39)	V1151F	probably damaging	Het
Slc15a2	A	T	16: 36,602,057 (GRCm39)	L80*	probably null	Het
Sorcs3	A	G	19: 48,782,602 (GRCm39)	D1039G	probably benign	Het
Spon1	A	G	7: 113,639,102 (GRCm39)	E776G	probably damaging	Het
Tdp1	C	T	12: 99,868,623 (GRCm39)	A259V	possibly damaging	Het
Tex46	C	A	4: 136,337,991 (GRCm39)	P61Q	probably benign	Het
Tnr	T	A	1: 159,724,636 (GRCm39)	L1109Q	probably damaging	Het
Tns2	C	T	15: 102,017,369 (GRCm39)	R281C	probably damaging	Het
Tpra1	G	A	6: 88,887,661 (GRCm39)		probably benign	Het
Trim43c	A	T	9: 88,729,705 (GRCm39)	H383L	possibly damaging	Het
Trip6	A	G	5: 137,308,433 (GRCm39)	C439R	probably damaging	Het
Tsen2	C	T	6: 115,552,894 (GRCm39)	S398L	possibly damaging	Het
Tubgcp2	T	C	7: 139,576,074 (GRCm39)	D863G	probably damaging	Het
Ube2d2a	A	G	18: 35,903,498 (GRCm39)		probably benign	Het
Umad1	T	A	6: 8,427,181 (GRCm39)	F145I	probably damaging	Het
Unc5c	A	T	3: 141,534,278 (GRCm39)	E933V	probably damaging	Het
Vmn1r208	A	G	13: 22,956,646 (GRCm39)	F284L	probably benign	Het
Vmn2r53	T	A	7: 12,334,692 (GRCm39)	R323*	probably null	Het
Zan	G	A	5: 137,387,281 (GRCm39)	T4924I	unknown	Het
Zfp597	G	T	16: 3,683,851 (GRCm39)	Q302K	probably benign	Het

Other mutations in Fnip2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00326:Fnip2	APN	3	79,388,828 (GRCm39)	missense	probably benign
IGL00339:Fnip2	APN	3	79,422,462 (GRCm39)	missense	probably benign	0.12
IGL00340:Fnip2	APN	3	79,425,368 (GRCm39)	splice site	probably benign
IGL00434:Fnip2	APN	3	79,419,796 (GRCm39)	splice site	probably benign
IGL01134:Fnip2	APN	3	79,419,810 (GRCm39)	nonsense	probably null
IGL02732:Fnip2	APN	3	79,373,004 (GRCm39)	missense	probably damaging	1.00
IGL03327:Fnip2	APN	3	79,425,388 (GRCm39)	missense	probably damaging	0.98
IGL03402:Fnip2	APN	3	79,388,583 (GRCm39)	missense	possibly damaging	0.92
R0314:Fnip2	UTSW	3	79,388,496 (GRCm39)	missense	probably damaging	1.00
R0318:Fnip2	UTSW	3	79,419,685 (GRCm39)	missense	probably damaging	1.00
R0699:Fnip2	UTSW	3	79,388,446 (GRCm39)	missense	probably benign	0.00
R1188:Fnip2	UTSW	3	79,369,469 (GRCm39)	missense	probably damaging	1.00
R1290:Fnip2	UTSW	3	79,373,000 (GRCm39)	missense	probably damaging	1.00
R1406:Fnip2	UTSW	3	79,415,398 (GRCm39)	missense	possibly damaging	0.85
R1406:Fnip2	UTSW	3	79,415,398 (GRCm39)	missense	possibly damaging	0.85
R1535:Fnip2	UTSW	3	79,389,072 (GRCm39)	missense	probably damaging	1.00
R1618:Fnip2	UTSW	3	79,415,475 (GRCm39)	missense	possibly damaging	0.70
R1661:Fnip2	UTSW	3	79,422,456 (GRCm39)	missense	probably benign
R1665:Fnip2	UTSW	3	79,422,456 (GRCm39)	missense	probably benign
R1965:Fnip2	UTSW	3	79,400,779 (GRCm39)	missense	probably benign	0.31
R1966:Fnip2	UTSW	3	79,400,779 (GRCm39)	missense	probably benign	0.31
R1976:Fnip2	UTSW	3	79,388,238 (GRCm39)	missense	probably benign	0.02
R2004:Fnip2	UTSW	3	79,419,632 (GRCm39)	splice site	probably benign
R2054:Fnip2	UTSW	3	79,479,772 (GRCm39)	unclassified	probably benign
R2145:Fnip2	UTSW	3	79,407,739 (GRCm39)	missense	probably damaging	0.99
R2400:Fnip2	UTSW	3	79,386,941 (GRCm39)	missense	probably benign	0.03
R2679:Fnip2	UTSW	3	79,388,233 (GRCm39)	missense	probably benign	0.13
R3157:Fnip2	UTSW	3	79,474,901 (GRCm39)	missense	probably damaging	1.00
R3851:Fnip2	UTSW	3	79,369,464 (GRCm39)	missense	probably damaging	1.00
R3910:Fnip2	UTSW	3	79,386,812 (GRCm39)	missense	possibly damaging	0.83
R3911:Fnip2	UTSW	3	79,386,812 (GRCm39)	missense	possibly damaging	0.83
R3912:Fnip2	UTSW	3	79,386,812 (GRCm39)	missense	possibly damaging	0.83
R4035:Fnip2	UTSW	3	79,386,808 (GRCm39)	missense	probably benign	0.00
R4166:Fnip2	UTSW	3	79,369,442 (GRCm39)	missense	probably damaging	1.00
R4537:Fnip2	UTSW	3	79,373,021 (GRCm39)	missense	probably damaging	0.98
R4732:Fnip2	UTSW	3	79,388,959 (GRCm39)	missense	probably damaging	1.00
R4733:Fnip2	UTSW	3	79,388,959 (GRCm39)	missense	probably damaging	1.00
R4923:Fnip2	UTSW	3	79,396,701 (GRCm39)	critical splice acceptor site	probably null
R5043:Fnip2	UTSW	3	79,400,174 (GRCm39)	nonsense	probably null
R5160:Fnip2	UTSW	3	79,396,298 (GRCm39)	missense	probably damaging	1.00
R5162:Fnip2	UTSW	3	79,389,084 (GRCm39)	missense	probably damaging	1.00
R5196:Fnip2	UTSW	3	79,479,845 (GRCm39)	unclassified	probably benign
R5283:Fnip2	UTSW	3	79,373,015 (GRCm39)	missense	probably damaging	1.00
R5364:Fnip2	UTSW	3	79,388,475 (GRCm39)	missense	probably benign	0.00
R5402:Fnip2	UTSW	3	79,388,250 (GRCm39)	missense	possibly damaging	0.89
R6340:Fnip2	UTSW	3	79,415,152 (GRCm39)	missense	probably damaging	1.00
R6459:Fnip2	UTSW	3	79,388,941 (GRCm39)	missense	possibly damaging	0.93
R6592:Fnip2	UTSW	3	79,389,015 (GRCm39)	missense	probably benign	0.26
R6616:Fnip2	UTSW	3	79,388,189 (GRCm39)	missense	probably benign	0.00
R6933:Fnip2	UTSW	3	79,425,418 (GRCm39)	missense	probably benign	0.28
R6962:Fnip2	UTSW	3	79,396,610 (GRCm39)	missense	probably damaging	1.00
R6971:Fnip2	UTSW	3	79,388,428 (GRCm39)	nonsense	probably null
R7050:Fnip2	UTSW	3	79,413,577 (GRCm39)	missense	probably damaging	0.99
R7097:Fnip2	UTSW	3	79,388,313 (GRCm39)	missense	probably benign
R7315:Fnip2	UTSW	3	79,413,512 (GRCm39)	critical splice donor site	probably null
R7714:Fnip2	UTSW	3	79,425,421 (GRCm39)	missense	probably damaging	1.00
R7782:Fnip2	UTSW	3	79,415,430 (GRCm39)	missense	probably benign	0.00
R8381:Fnip2	UTSW	3	79,373,000 (GRCm39)	missense	probably damaging	1.00
R8479:Fnip2	UTSW	3	79,419,862 (GRCm39)	missense	probably damaging	1.00
R8485:Fnip2	UTSW	3	79,388,844 (GRCm39)	missense	probably benign	0.35
R9344:Fnip2	UTSW	3	79,407,717 (GRCm39)	missense	possibly damaging	0.87
R9753:Fnip2	UTSW	3	79,415,411 (GRCm39)	missense	probably benign	0.27

Predicted Primers

PCR Primer
(F):5'- TGTCAAAGCTCTGCCCTGTC -3'
(R):5'- TTAAGTGCTGCCTCAGTGG -3'

Sequencing Primer
(F):5'- TGATGACAGAAGATCAGACACTTAC -3'
(R):5'- GGCACACCTTCCTGAGTAC -3'

Posted On

2015-12-29