Incidental Mutation 'R4791:Kdm5b'
ID |
368532 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Kdm5b
|
Ensembl Gene |
ENSMUSG00000042207 |
Gene Name |
lysine demethylase 5B |
Synonyms |
2010009J12Rik, PLU-1, Rb-Bp2, Jarid1b, D1Ertd202e, Plu1, 2210016I17Rik |
MMRRC Submission |
041976-MU
|
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.451)
|
Stock # |
R4791 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
1 |
Chromosomal Location |
134487916-134560621 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 134558538 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Glycine
at position 1515
(E1515G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000107817
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000047714]
[ENSMUST00000112198]
|
AlphaFold |
Q80Y84 |
PDB Structure |
Solution structure of the ARID domain of Jarid1b protein [SOLUTION NMR]
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000047714
|
SMART Domains |
Protein: ENSMUSP00000038138 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
744 |
2.2e-17 |
PFAM |
Pfam:PLU-1
|
757 |
1088 |
5.6e-92 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
PHD
|
1486 |
1536 |
1.18e-6 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000112198
AA Change: E1515G
PolyPhen 2
Score 0.816 (Sensitivity: 0.84; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000107817 Gene: ENSMUSG00000042207 AA Change: E1515G
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
745 |
6.7e-21 |
PFAM |
Pfam:PLU-1
|
756 |
1088 |
6e-94 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000191572
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 94.3%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: This gene encodes a lysine-specific histone demethylase that belongs to the jumonji/ARID domain-containing family of histone demethylases. The encoded protein is capable of demethylating tri-, di- and monomethylated lysine 4 of histone H3. This protein plays a role in the transcriptional repression or certain tumor suppressor genes and is upregulated in certain cancer cells. This protein may also play a role in genome stability and DNA repair. Homozygous mutant mice display decreased body weight, decreased female fertility, lower uterine weight, and a delay in mammary development. Knockout of this gene has also been associated with embryonic lethality. [provided by RefSeq, Dec 2016] PHENOTYPE: Mice homozygous for a gene trapped allele exhibit decreased body weight, background-sensitive premature mortality, decreased female fertility, delayed mammary gland development, decreased serum estradiol levels, and reduced mammary epithelial cell proliferation in early puberty. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 97 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc6 |
C |
T |
7: 45,631,584 (GRCm39) |
V1231M |
probably benign |
Het |
Agl |
A |
G |
3: 116,580,177 (GRCm39) |
|
probably null |
Het |
Ak7 |
T |
C |
12: 105,676,404 (GRCm39) |
F35L |
probably benign |
Het |
Aldh1a1 |
A |
G |
19: 20,597,349 (GRCm39) |
N110S |
probably damaging |
Het |
Arhgef5 |
C |
T |
6: 43,260,117 (GRCm39) |
L1368F |
probably damaging |
Het |
Atp5mf |
T |
C |
5: 145,121,365 (GRCm39) |
Y72C |
possibly damaging |
Het |
Atp6v0a2 |
T |
G |
5: 124,784,667 (GRCm39) |
F317V |
probably benign |
Het |
Bank1 |
A |
T |
3: 135,960,690 (GRCm39) |
S56T |
probably benign |
Het |
Cachd1 |
T |
A |
4: 100,775,282 (GRCm39) |
C166S |
probably damaging |
Het |
Cand1 |
A |
G |
10: 119,046,607 (GRCm39) |
I961T |
probably benign |
Het |
Ccdc73 |
G |
A |
2: 104,811,450 (GRCm39) |
|
probably null |
Het |
Cct6b |
A |
T |
11: 82,632,830 (GRCm39) |
|
probably null |
Het |
Chd2 |
A |
C |
7: 73,118,325 (GRCm39) |
S1098A |
probably benign |
Het |
Col6a4 |
A |
T |
9: 105,957,401 (GRCm39) |
V141E |
possibly damaging |
Het |
Col6a5 |
T |
C |
9: 105,807,983 (GRCm39) |
T1022A |
unknown |
Het |
Cr2 |
A |
T |
1: 194,838,243 (GRCm39) |
C698S |
probably damaging |
Het |
Dnaaf5 |
C |
A |
5: 139,170,405 (GRCm39) |
Q786K |
possibly damaging |
Het |
Dnah6 |
T |
C |
6: 73,072,057 (GRCm39) |
D2423G |
probably benign |
Het |
Dnhd1 |
T |
C |
7: 105,370,324 (GRCm39) |
F4583S |
probably damaging |
Het |
Duoxa2 |
A |
T |
2: 122,131,679 (GRCm39) |
T123S |
probably damaging |
Het |
Edem1 |
T |
G |
6: 108,818,595 (GRCm39) |
V201G |
probably damaging |
Het |
Eef1d |
C |
T |
15: 75,775,531 (GRCm39) |
A43T |
possibly damaging |
Het |
Elavl3 |
T |
C |
9: 21,935,974 (GRCm39) |
K249E |
probably damaging |
Het |
Epg5 |
G |
T |
18: 77,992,211 (GRCm39) |
E303* |
probably null |
Het |
Fam83h |
T |
C |
15: 75,874,217 (GRCm39) |
D1040G |
probably damaging |
Het |
Fndc7 |
A |
T |
3: 108,783,975 (GRCm39) |
F211L |
probably benign |
Het |
Fsip2 |
A |
G |
2: 82,812,452 (GRCm39) |
T2924A |
possibly damaging |
Het |
Gm5616 |
T |
C |
9: 48,361,983 (GRCm39) |
|
noncoding transcript |
Het |
Gpr135 |
T |
A |
12: 72,116,642 (GRCm39) |
D375V |
probably benign |
Het |
Hgd |
A |
G |
16: 37,452,187 (GRCm39) |
*446W |
probably null |
Het |
Hivep2 |
C |
A |
10: 14,004,713 (GRCm39) |
T437K |
probably benign |
Het |
Htra2 |
A |
G |
6: 83,028,798 (GRCm39) |
L379P |
probably damaging |
Het |
Hypk |
G |
T |
2: 121,288,136 (GRCm39) |
|
probably null |
Het |
Ica1l |
A |
G |
1: 60,049,360 (GRCm39) |
F198L |
probably damaging |
Het |
Igsf11 |
G |
A |
16: 38,845,226 (GRCm39) |
S319N |
probably damaging |
Het |
Il12rb1 |
T |
C |
8: 71,266,012 (GRCm39) |
S213P |
possibly damaging |
Het |
Katnal1 |
C |
T |
5: 148,841,460 (GRCm39) |
V135M |
probably damaging |
Het |
Kcnc4 |
G |
A |
3: 107,354,859 (GRCm39) |
P530S |
probably benign |
Het |
Kcnu1 |
T |
C |
8: 26,403,780 (GRCm39) |
Y24H |
probably damaging |
Het |
Kif18a |
A |
T |
2: 109,118,220 (GRCm39) |
M12L |
probably benign |
Het |
Klre1 |
T |
C |
6: 129,561,118 (GRCm39) |
S160P |
probably damaging |
Het |
Lama2 |
A |
T |
10: 27,343,267 (GRCm39) |
H68Q |
probably damaging |
Het |
Lgals8 |
T |
C |
13: 12,468,203 (GRCm39) |
K49R |
possibly damaging |
Het |
Lmf1 |
G |
A |
17: 25,873,445 (GRCm39) |
V317M |
probably damaging |
Het |
Lsr |
T |
C |
7: 30,657,977 (GRCm39) |
T328A |
probably damaging |
Het |
Mark4 |
C |
T |
7: 19,185,582 (GRCm39) |
E51K |
probably benign |
Het |
Mindy2 |
T |
C |
9: 70,541,283 (GRCm39) |
|
probably null |
Het |
Mkks |
G |
A |
2: 136,718,082 (GRCm39) |
T400I |
probably benign |
Het |
Mon2 |
T |
A |
10: 122,841,962 (GRCm39) |
M1544L |
probably benign |
Het |
Mrc2 |
G |
A |
11: 105,239,257 (GRCm39) |
|
probably null |
Het |
Myo5c |
T |
G |
9: 75,198,198 (GRCm39) |
L1341R |
probably damaging |
Het |
Nin |
T |
C |
12: 70,090,581 (GRCm39) |
R945G |
possibly damaging |
Het |
Nox4 |
T |
C |
7: 86,954,055 (GRCm39) |
V120A |
probably benign |
Het |
Or1s2 |
T |
A |
19: 13,758,706 (GRCm39) |
C243* |
probably null |
Het |
Or2aj4 |
G |
T |
16: 19,385,413 (GRCm39) |
H73Q |
possibly damaging |
Het |
Or2z2 |
A |
T |
11: 58,346,370 (GRCm39) |
V135E |
possibly damaging |
Het |
Or4a66 |
C |
T |
2: 88,531,242 (GRCm39) |
V144I |
probably benign |
Het |
Or7g29 |
T |
C |
9: 19,287,105 (GRCm39) |
E24G |
probably benign |
Het |
Plekha2 |
T |
A |
8: 25,532,778 (GRCm39) |
R398W |
probably damaging |
Het |
Pradc1 |
A |
G |
6: 85,424,173 (GRCm39) |
W58R |
probably damaging |
Het |
Pramel20 |
A |
G |
4: 143,297,559 (GRCm39) |
|
probably benign |
Het |
Prrc2b |
A |
G |
2: 32,107,351 (GRCm39) |
|
probably null |
Het |
Psg19 |
T |
A |
7: 18,528,071 (GRCm39) |
N224I |
probably damaging |
Het |
Ranbp17 |
A |
C |
11: 33,437,746 (GRCm39) |
V164G |
probably benign |
Het |
Rasgrp3 |
A |
G |
17: 75,807,168 (GRCm39) |
S211G |
probably benign |
Het |
Rcc1l |
G |
A |
5: 134,192,615 (GRCm39) |
P270S |
possibly damaging |
Het |
Rfx6 |
T |
A |
10: 51,596,040 (GRCm39) |
|
probably null |
Het |
Rnf222 |
A |
T |
11: 68,783,845 (GRCm39) |
E137D |
probably damaging |
Het |
Selenof |
T |
G |
3: 144,302,584 (GRCm39) |
Y120D |
probably damaging |
Het |
Sema3b |
G |
T |
9: 107,481,012 (GRCm39) |
D108E |
probably damaging |
Het |
Shank3 |
T |
A |
15: 89,384,557 (GRCm39) |
L143Q |
probably damaging |
Het |
Shtn1 |
G |
C |
19: 59,039,305 (GRCm39) |
R45G |
probably damaging |
Het |
Sirt4 |
T |
C |
5: 115,618,373 (GRCm39) |
T234A |
possibly damaging |
Het |
Slc25a30 |
C |
A |
14: 76,000,806 (GRCm39) |
W266L |
probably benign |
Het |
Spata20 |
A |
T |
11: 94,375,412 (GRCm39) |
N127K |
probably damaging |
Het |
Spmip4 |
G |
T |
6: 50,572,817 (GRCm39) |
P32Q |
probably damaging |
Het |
St14 |
C |
T |
9: 31,006,918 (GRCm39) |
G636D |
probably benign |
Het |
Stat5a |
G |
A |
11: 100,756,289 (GRCm39) |
E170K |
probably damaging |
Het |
Sugp2 |
C |
T |
8: 70,695,440 (GRCm39) |
R138C |
probably damaging |
Het |
Sult1e1 |
C |
A |
5: 87,734,589 (GRCm39) |
W119L |
possibly damaging |
Het |
Sv2a |
T |
C |
3: 96,099,874 (GRCm39) |
V608A |
possibly damaging |
Het |
Syne2 |
T |
C |
12: 75,956,018 (GRCm39) |
Y575H |
possibly damaging |
Het |
Taok2 |
G |
A |
7: 126,467,304 (GRCm39) |
S167L |
possibly damaging |
Het |
Thoc6 |
T |
C |
17: 23,889,041 (GRCm39) |
H151R |
possibly damaging |
Het |
Tm9sf2 |
T |
C |
14: 122,377,062 (GRCm39) |
S197P |
probably benign |
Het |
Tmem260 |
CAGGGACCGGCATAG |
CAG |
14: 48,749,451 (GRCm39) |
|
probably benign |
Het |
Tmx2 |
G |
A |
2: 84,508,340 (GRCm39) |
P15L |
probably damaging |
Het |
Top1mt |
C |
T |
15: 75,540,474 (GRCm39) |
|
probably null |
Het |
Trpm6 |
T |
A |
19: 18,845,345 (GRCm39) |
S1682T |
probably benign |
Het |
Trrap |
C |
T |
5: 144,740,087 (GRCm39) |
R1171W |
probably damaging |
Het |
Ugt3a1 |
A |
G |
15: 9,361,665 (GRCm39) |
D147G |
probably damaging |
Het |
Utp25 |
G |
A |
1: 192,810,575 (GRCm39) |
H143Y |
probably benign |
Het |
Vnn3 |
A |
G |
10: 23,740,519 (GRCm39) |
H274R |
probably benign |
Het |
Vwf |
C |
A |
6: 125,620,326 (GRCm39) |
T1668K |
|
Het |
Zfp568 |
T |
C |
7: 29,714,608 (GRCm39) |
S162P |
probably damaging |
Het |
Zfp658 |
T |
A |
7: 43,223,890 (GRCm39) |
C722S |
possibly damaging |
Het |
Zfp808 |
T |
A |
13: 62,319,045 (GRCm39) |
H91Q |
probably damaging |
Het |
|
Other mutations in Kdm5b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00230:Kdm5b
|
APN |
1 |
134,548,693 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01458:Kdm5b
|
APN |
1 |
134,549,724 (GRCm39) |
missense |
possibly damaging |
0.53 |
IGL01567:Kdm5b
|
APN |
1 |
134,530,278 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01625:Kdm5b
|
APN |
1 |
134,545,706 (GRCm39) |
missense |
possibly damaging |
0.74 |
IGL01970:Kdm5b
|
APN |
1 |
134,528,465 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02183:Kdm5b
|
APN |
1 |
134,552,669 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02592:Kdm5b
|
APN |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02695:Kdm5b
|
APN |
1 |
134,532,223 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02697:Kdm5b
|
APN |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
IGL03036:Kdm5b
|
APN |
1 |
134,536,675 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03056:Kdm5b
|
APN |
1 |
134,515,717 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03206:Kdm5b
|
APN |
1 |
134,555,055 (GRCm39) |
missense |
probably benign |
|
IGL03342:Kdm5b
|
APN |
1 |
134,530,314 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03388:Kdm5b
|
APN |
1 |
134,555,060 (GRCm39) |
missense |
probably benign |
|
amaryllis
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
PIT4486001:Kdm5b
|
UTSW |
1 |
134,556,423 (GRCm39) |
missense |
probably damaging |
1.00 |
R0233:Kdm5b
|
UTSW |
1 |
134,532,372 (GRCm39) |
splice site |
probably benign |
|
R0334:Kdm5b
|
UTSW |
1 |
134,532,260 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Kdm5b
|
UTSW |
1 |
134,548,761 (GRCm39) |
critical splice donor site |
probably null |
|
R0505:Kdm5b
|
UTSW |
1 |
134,530,309 (GRCm39) |
missense |
probably damaging |
0.96 |
R0521:Kdm5b
|
UTSW |
1 |
134,545,771 (GRCm39) |
missense |
possibly damaging |
0.65 |
R1004:Kdm5b
|
UTSW |
1 |
134,516,642 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1087:Kdm5b
|
UTSW |
1 |
134,528,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R1126:Kdm5b
|
UTSW |
1 |
134,541,729 (GRCm39) |
missense |
possibly damaging |
0.90 |
R1221:Kdm5b
|
UTSW |
1 |
134,526,829 (GRCm39) |
missense |
probably damaging |
0.98 |
R1230:Kdm5b
|
UTSW |
1 |
134,540,992 (GRCm39) |
missense |
probably damaging |
1.00 |
R1345:Kdm5b
|
UTSW |
1 |
134,558,288 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1482:Kdm5b
|
UTSW |
1 |
134,552,635 (GRCm39) |
missense |
probably damaging |
1.00 |
R1582:Kdm5b
|
UTSW |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
R1653:Kdm5b
|
UTSW |
1 |
134,530,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R1693:Kdm5b
|
UTSW |
1 |
134,525,314 (GRCm39) |
splice site |
probably benign |
|
R1721:Kdm5b
|
UTSW |
1 |
134,540,919 (GRCm39) |
splice site |
probably benign |
|
R1741:Kdm5b
|
UTSW |
1 |
134,545,755 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1762:Kdm5b
|
UTSW |
1 |
134,532,205 (GRCm39) |
nonsense |
probably null |
|
R1820:Kdm5b
|
UTSW |
1 |
134,525,408 (GRCm39) |
missense |
possibly damaging |
0.87 |
R1872:Kdm5b
|
UTSW |
1 |
134,552,732 (GRCm39) |
missense |
probably damaging |
1.00 |
R1966:Kdm5b
|
UTSW |
1 |
134,541,611 (GRCm39) |
splice site |
probably null |
|
R2056:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2059:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2405:Kdm5b
|
UTSW |
1 |
134,536,754 (GRCm39) |
missense |
probably damaging |
0.97 |
R3417:Kdm5b
|
UTSW |
1 |
134,515,715 (GRCm39) |
missense |
probably damaging |
1.00 |
R3771:Kdm5b
|
UTSW |
1 |
134,541,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R3783:Kdm5b
|
UTSW |
1 |
134,558,280 (GRCm39) |
missense |
probably benign |
|
R3803:Kdm5b
|
UTSW |
1 |
134,543,679 (GRCm39) |
missense |
probably benign |
0.07 |
R3980:Kdm5b
|
UTSW |
1 |
134,547,408 (GRCm39) |
missense |
probably benign |
0.11 |
R3983:Kdm5b
|
UTSW |
1 |
134,559,042 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4013:Kdm5b
|
UTSW |
1 |
134,555,067 (GRCm39) |
missense |
possibly damaging |
0.86 |
R4162:Kdm5b
|
UTSW |
1 |
134,552,899 (GRCm39) |
missense |
probably benign |
0.01 |
R4701:Kdm5b
|
UTSW |
1 |
134,533,750 (GRCm39) |
intron |
probably benign |
|
R4836:Kdm5b
|
UTSW |
1 |
134,521,053 (GRCm39) |
splice site |
probably null |
|
R4924:Kdm5b
|
UTSW |
1 |
134,559,089 (GRCm39) |
missense |
probably benign |
0.00 |
R5135:Kdm5b
|
UTSW |
1 |
134,516,484 (GRCm39) |
intron |
probably benign |
|
R5248:Kdm5b
|
UTSW |
1 |
134,548,735 (GRCm39) |
missense |
probably benign |
0.11 |
R5290:Kdm5b
|
UTSW |
1 |
134,549,837 (GRCm39) |
splice site |
probably null |
|
R5358:Kdm5b
|
UTSW |
1 |
134,535,432 (GRCm39) |
nonsense |
probably null |
|
R5388:Kdm5b
|
UTSW |
1 |
134,536,635 (GRCm39) |
nonsense |
probably null |
|
R5396:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5397:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5398:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5399:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5529:Kdm5b
|
UTSW |
1 |
134,515,741 (GRCm39) |
missense |
probably damaging |
1.00 |
R5540:Kdm5b
|
UTSW |
1 |
134,558,979 (GRCm39) |
missense |
probably damaging |
0.98 |
R5661:Kdm5b
|
UTSW |
1 |
134,526,811 (GRCm39) |
missense |
probably benign |
0.01 |
R5663:Kdm5b
|
UTSW |
1 |
134,558,373 (GRCm39) |
missense |
probably benign |
|
R5822:Kdm5b
|
UTSW |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
R6226:Kdm5b
|
UTSW |
1 |
134,536,616 (GRCm39) |
missense |
probably damaging |
0.99 |
R6368:Kdm5b
|
UTSW |
1 |
134,526,945 (GRCm39) |
missense |
probably damaging |
1.00 |
R6681:Kdm5b
|
UTSW |
1 |
134,541,007 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6715:Kdm5b
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
R7132:Kdm5b
|
UTSW |
1 |
134,526,844 (GRCm39) |
missense |
probably damaging |
1.00 |
R7202:Kdm5b
|
UTSW |
1 |
134,552,497 (GRCm39) |
missense |
probably benign |
|
R7258:Kdm5b
|
UTSW |
1 |
134,548,759 (GRCm39) |
missense |
probably damaging |
1.00 |
R7335:Kdm5b
|
UTSW |
1 |
134,488,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R7420:Kdm5b
|
UTSW |
1 |
134,532,235 (GRCm39) |
missense |
probably benign |
0.14 |
R7426:Kdm5b
|
UTSW |
1 |
134,523,571 (GRCm39) |
missense |
probably benign |
0.02 |
R7452:Kdm5b
|
UTSW |
1 |
134,552,686 (GRCm39) |
missense |
probably damaging |
1.00 |
R7595:Kdm5b
|
UTSW |
1 |
134,536,704 (GRCm39) |
missense |
probably benign |
0.00 |
R7612:Kdm5b
|
UTSW |
1 |
134,552,656 (GRCm39) |
nonsense |
probably null |
|
R7704:Kdm5b
|
UTSW |
1 |
134,515,669 (GRCm39) |
missense |
probably damaging |
1.00 |
R7846:Kdm5b
|
UTSW |
1 |
134,545,578 (GRCm39) |
missense |
probably damaging |
1.00 |
R8115:Kdm5b
|
UTSW |
1 |
134,547,411 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8146:Kdm5b
|
UTSW |
1 |
134,552,864 (GRCm39) |
missense |
probably benign |
0.05 |
R8160:Kdm5b
|
UTSW |
1 |
134,541,657 (GRCm39) |
missense |
probably damaging |
1.00 |
R8527:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8542:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8930:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8932:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8950:Kdm5b
|
UTSW |
1 |
134,541,664 (GRCm39) |
missense |
possibly damaging |
0.84 |
R9089:Kdm5b
|
UTSW |
1 |
134,535,506 (GRCm39) |
missense |
probably damaging |
0.98 |
R9109:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9133:Kdm5b
|
UTSW |
1 |
134,530,323 (GRCm39) |
missense |
probably benign |
|
R9298:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9423:Kdm5b
|
UTSW |
1 |
134,515,705 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9630:Kdm5b
|
UTSW |
1 |
134,512,971 (GRCm39) |
critical splice donor site |
probably null |
|
R9670:Kdm5b
|
UTSW |
1 |
134,558,240 (GRCm39) |
nonsense |
probably null |
|
X0063:Kdm5b
|
UTSW |
1 |
134,516,614 (GRCm39) |
missense |
probably benign |
0.07 |
Z1176:Kdm5b
|
UTSW |
1 |
134,552,773 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Kdm5b
|
UTSW |
1 |
134,523,536 (GRCm39) |
frame shift |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- CTATGACTTAGTGCGTAATGCTG -3'
(R):5'- AAGGGCACTCACTCCATCAG -3'
Sequencing Primer
(F):5'- GTGCGTAATGCTGAAACTCATTCC -3'
(R):5'- CCACCTTCTGAGCGCCG -3'
|
Posted On |
2016-02-04 |