Incidental Mutation 'R4799:Spag9'
ID |
369361 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Spag9
|
Ensembl Gene |
ENSMUSG00000020859 |
Gene Name |
sperm associated antigen 9 |
Synonyms |
JLP, Mapk8ip4, 3110018C07Rik, JIP4, 4733401I23Rik, syd1, 4831406C20Rik |
MMRRC Submission |
041997-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.737)
|
Stock # |
R4799 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
93886917-94016911 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 93939342 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Lysine to Asparagine
at position 90
(K90N)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000118850
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000024979]
[ENSMUST00000041956]
[ENSMUST00000075695]
[ENSMUST00000092777]
[ENSMUST00000103168]
[ENSMUST00000132079]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000024979
AA Change: K90N
PolyPhen 2
Score 0.091 (Sensitivity: 0.93; Specificity: 0.85)
|
SMART Domains |
Protein: ENSMUSP00000024979 Gene: ENSMUSG00000020859 AA Change: K90N
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
PDB:2W83|D
|
253 |
305 |
1e-25 |
PDB |
low complexity region
|
306 |
339 |
N/A |
INTRINSIC |
coiled coil region
|
572 |
606 |
N/A |
INTRINSIC |
low complexity region
|
735 |
751 |
N/A |
INTRINSIC |
SCOP:d1kb0a2
|
823 |
969 |
3e-5 |
SMART |
Blast:WD40
|
924 |
964 |
8e-18 |
BLAST |
low complexity region
|
1132 |
1150 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000041956
AA Change: K233N
PolyPhen 2
Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)
|
SMART Domains |
Protein: ENSMUSP00000042271 Gene: ENSMUSG00000020859 AA Change: K233N
Domain | Start | End | E-Value | Type |
Pfam:Jnk-SapK_ap_N
|
24 |
179 |
2e-61 |
PFAM |
Pfam:JIP_LZII
|
390 |
460 |
5.3e-32 |
PFAM |
coiled coil region
|
710 |
744 |
N/A |
INTRINSIC |
low complexity region
|
873 |
889 |
N/A |
INTRINSIC |
SCOP:d1kb0a2
|
961 |
1107 |
1e-5 |
SMART |
Blast:WD40
|
1062 |
1102 |
1e-17 |
BLAST |
low complexity region
|
1270 |
1288 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000075695
AA Change: K90N
PolyPhen 2
Score 0.147 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000075115 Gene: ENSMUSG00000020859 AA Change: K90N
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
PDB:2W83|D
|
253 |
305 |
1e-25 |
PDB |
low complexity region
|
306 |
339 |
N/A |
INTRINSIC |
coiled coil region
|
571 |
605 |
N/A |
INTRINSIC |
low complexity region
|
734 |
750 |
N/A |
INTRINSIC |
SCOP:d1kb0a2
|
822 |
968 |
3e-5 |
SMART |
Blast:WD40
|
923 |
963 |
7e-18 |
BLAST |
low complexity region
|
1131 |
1149 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000092777
AA Change: K90N
PolyPhen 2
Score 0.091 (Sensitivity: 0.93; Specificity: 0.85)
|
SMART Domains |
Protein: ENSMUSP00000090452 Gene: ENSMUSG00000020859 AA Change: K90N
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
PDB:2W83|D
|
254 |
306 |
1e-25 |
PDB |
low complexity region
|
307 |
340 |
N/A |
INTRINSIC |
coiled coil region
|
572 |
606 |
N/A |
INTRINSIC |
low complexity region
|
735 |
751 |
N/A |
INTRINSIC |
SCOP:d1kb0a2
|
823 |
969 |
3e-5 |
SMART |
Blast:WD40
|
924 |
964 |
7e-18 |
BLAST |
low complexity region
|
1132 |
1150 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000103168
AA Change: K90N
PolyPhen 2
Score 0.040 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000099457 Gene: ENSMUSG00000020859 AA Change: K90N
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
PDB:2W83|D
|
249 |
301 |
1e-25 |
PDB |
low complexity region
|
302 |
335 |
N/A |
INTRINSIC |
coiled coil region
|
567 |
601 |
N/A |
INTRINSIC |
low complexity region
|
730 |
746 |
N/A |
INTRINSIC |
SCOP:d1kb0a2
|
818 |
964 |
3e-5 |
SMART |
Blast:WD40
|
919 |
959 |
8e-18 |
BLAST |
low complexity region
|
1127 |
1145 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127066
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000132079
AA Change: K90N
PolyPhen 2
Score 0.869 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000118850 Gene: ENSMUSG00000020859 AA Change: K90N
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
coiled coil region
|
360 |
394 |
N/A |
INTRINSIC |
low complexity region
|
523 |
539 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000132605
|
Predicted Effect |
unknown
Transcript: ENSMUST00000156019
AA Change: K68N
|
SMART Domains |
Protein: ENSMUSP00000115864 Gene: ENSMUSG00000020859 AA Change: K68N
Domain | Start | End | E-Value | Type |
Pfam:JIP_LZII
|
240 |
310 |
1.1e-32 |
PFAM |
coiled coil region
|
559 |
593 |
N/A |
INTRINSIC |
low complexity region
|
723 |
739 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000132772
|
Meta Mutation Damage Score |
0.0752 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.4%
- 20x: 92.6%
|
Validation Efficiency |
97% (122/126) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the cancer testis antigen gene family. The encoded protein functions as a scaffold protein that structurally organizes mitogen-activated protein kinases and mediates c-Jun-terminal kinase signaling. This protein also binds to kinesin-1 and may be involved in microtubule-based membrane transport. This protein may play a role in tumor growth and development. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011] PHENOTYPE: Male mice homozygous for a null mutation display reduced fertility with oligoasthenozoospermia. [provided by MGI curators]
|
Allele List at MGI |
All alleles(5) : Targeted, knock-out(1) Gene trapped(4) |
Other mutations in this stock |
Total: 118 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abhd12b |
C |
G |
12: 70,215,838 (GRCm39) |
S170C |
probably damaging |
Het |
Acads |
T |
A |
5: 115,251,149 (GRCm39) |
T112S |
probably benign |
Het |
Adgrl1 |
A |
G |
8: 84,662,202 (GRCm39) |
H1021R |
probably benign |
Het |
Ago3 |
A |
T |
4: 126,241,665 (GRCm39) |
|
probably null |
Het |
Ap5m1 |
A |
G |
14: 49,318,527 (GRCm39) |
K412E |
probably benign |
Het |
Arid1b |
C |
T |
17: 5,389,496 (GRCm39) |
P1681S |
probably damaging |
Het |
Atxn10 |
T |
C |
15: 85,260,909 (GRCm39) |
|
probably null |
Het |
AU040320 |
A |
G |
4: 126,733,462 (GRCm39) |
T661A |
probably benign |
Het |
Bhmt1b |
C |
A |
18: 87,774,573 (GRCm39) |
A32E |
probably damaging |
Het |
Capn7 |
T |
C |
14: 31,082,514 (GRCm39) |
I455M |
probably benign |
Het |
Capzb |
A |
G |
4: 138,920,310 (GRCm39) |
|
probably benign |
Het |
Car10 |
G |
A |
11: 93,469,492 (GRCm39) |
V156I |
possibly damaging |
Het |
Cbs |
T |
A |
17: 31,851,826 (GRCm39) |
D59V |
probably damaging |
Het |
Ccar2 |
T |
C |
14: 70,377,003 (GRCm39) |
E819G |
probably damaging |
Het |
Cdc73 |
T |
A |
1: 143,503,613 (GRCm39) |
Q346L |
probably benign |
Het |
Cdhr4 |
T |
C |
9: 107,875,898 (GRCm39) |
|
probably benign |
Het |
Cfap251 |
C |
T |
5: 123,440,835 (GRCm39) |
H1131Y |
probably benign |
Het |
Chd2 |
A |
T |
7: 73,134,184 (GRCm39) |
M721K |
possibly damaging |
Het |
Cntnap5b |
G |
A |
1: 100,286,450 (GRCm39) |
G402R |
probably benign |
Het |
Cps1 |
T |
C |
1: 67,182,145 (GRCm39) |
Y120H |
probably damaging |
Het |
Csf2 |
T |
C |
11: 54,140,306 (GRCm39) |
D44G |
probably benign |
Het |
Cubn |
T |
A |
2: 13,291,835 (GRCm39) |
Q3330L |
possibly damaging |
Het |
Cubn |
A |
G |
2: 13,355,869 (GRCm39) |
S1788P |
probably damaging |
Het |
Cul9 |
T |
C |
17: 46,811,770 (GRCm39) |
D2486G |
possibly damaging |
Het |
Cyp2c40 |
A |
T |
19: 39,762,293 (GRCm39) |
S451R |
probably damaging |
Het |
Cyp51 |
T |
A |
5: 4,133,256 (GRCm39) |
T461S |
probably damaging |
Het |
Cyth1 |
T |
C |
11: 118,074,768 (GRCm39) |
M164V |
probably damaging |
Het |
D130043K22Rik |
T |
C |
13: 25,062,023 (GRCm39) |
I664T |
probably damaging |
Het |
Ddc |
T |
C |
11: 11,796,632 (GRCm39) |
|
probably null |
Het |
Ddx21 |
A |
T |
10: 62,423,900 (GRCm39) |
D589E |
probably damaging |
Het |
Dgkb |
C |
T |
12: 38,164,567 (GRCm39) |
R113C |
possibly damaging |
Het |
Dglucy |
A |
T |
12: 100,816,602 (GRCm39) |
M415L |
probably benign |
Het |
Efnb2 |
A |
T |
8: 8,673,104 (GRCm39) |
|
probably null |
Het |
Elp4 |
T |
A |
2: 105,639,612 (GRCm39) |
Q189L |
probably damaging |
Het |
Enpp2 |
T |
C |
15: 54,773,490 (GRCm39) |
N77S |
probably damaging |
Het |
Eps15 |
G |
A |
4: 109,223,727 (GRCm39) |
|
probably benign |
Het |
F2rl1 |
G |
A |
13: 95,650,477 (GRCm39) |
S135F |
possibly damaging |
Het |
Fam133b |
T |
C |
5: 3,607,815 (GRCm39) |
M65T |
probably damaging |
Het |
Fanca |
A |
G |
8: 124,014,941 (GRCm39) |
V689A |
probably damaging |
Het |
Fbh1 |
C |
T |
2: 11,760,558 (GRCm39) |
C79Y |
probably damaging |
Het |
Fbxw7 |
C |
T |
3: 84,811,168 (GRCm39) |
Q98* |
probably null |
Het |
Flrt3 |
T |
C |
2: 140,502,086 (GRCm39) |
N514S |
probably damaging |
Het |
Foxj3 |
A |
T |
4: 119,478,857 (GRCm39) |
S438C |
unknown |
Het |
Gcm2 |
T |
C |
13: 41,256,970 (GRCm39) |
K260E |
possibly damaging |
Het |
Gm12863 |
C |
T |
4: 118,811,685 (GRCm39) |
|
noncoding transcript |
Het |
Gpnmb |
G |
T |
6: 49,022,417 (GRCm39) |
|
probably null |
Het |
Gsap |
C |
A |
5: 21,455,941 (GRCm39) |
N379K |
probably benign |
Het |
Hsd3b1 |
T |
A |
3: 98,760,181 (GRCm39) |
Y270F |
probably benign |
Het |
Ift70a2 |
T |
A |
2: 75,807,729 (GRCm39) |
Y261F |
probably benign |
Het |
Il22 |
C |
A |
10: 118,041,058 (GRCm39) |
R55S |
probably damaging |
Het |
Kcnd3 |
C |
T |
3: 105,566,082 (GRCm39) |
A421V |
probably damaging |
Het |
Klhdc3 |
T |
C |
17: 46,988,226 (GRCm39) |
R180G |
possibly damaging |
Het |
Lmbrd1 |
G |
A |
1: 24,784,056 (GRCm39) |
|
probably null |
Het |
Lrrcc1 |
C |
T |
3: 14,601,156 (GRCm39) |
R63* |
probably null |
Het |
Lyar |
A |
G |
5: 38,382,123 (GRCm39) |
D35G |
probably damaging |
Het |
Mbd4 |
C |
T |
6: 115,822,283 (GRCm39) |
R442Q |
probably benign |
Het |
Mib2 |
G |
T |
4: 155,744,229 (GRCm39) |
S144R |
probably benign |
Het |
Mms22l |
A |
T |
4: 24,580,052 (GRCm39) |
|
probably null |
Het |
Mtmr3 |
G |
A |
11: 4,437,764 (GRCm39) |
H897Y |
probably benign |
Het |
Muc5b |
T |
A |
7: 141,401,453 (GRCm39) |
C566* |
probably null |
Het |
Nap1l4 |
A |
T |
7: 143,088,200 (GRCm39) |
|
probably null |
Het |
Ncor2 |
A |
T |
5: 125,114,124 (GRCm39) |
|
probably null |
Het |
Ndufa7 |
T |
C |
17: 34,057,187 (GRCm39) |
|
probably benign |
Het |
Ndufs1 |
C |
A |
1: 63,200,108 (GRCm39) |
G268V |
probably damaging |
Het |
Nfs1 |
A |
G |
2: 155,976,369 (GRCm39) |
V175A |
possibly damaging |
Het |
Obsl1 |
C |
A |
1: 75,466,145 (GRCm39) |
A1528S |
possibly damaging |
Het |
Or2z8 |
A |
G |
8: 72,811,938 (GRCm39) |
N138S |
probably benign |
Het |
Or4a79 |
C |
T |
2: 89,551,706 (GRCm39) |
V250I |
probably benign |
Het |
Or52z1 |
A |
T |
7: 103,436,688 (GRCm39) |
F265L |
possibly damaging |
Het |
Or7a42 |
T |
G |
10: 78,791,931 (GRCm39) |
D297E |
probably null |
Het |
Or8k39 |
C |
T |
2: 86,563,018 (GRCm39) |
|
probably null |
Het |
Pcdhb8 |
A |
G |
18: 37,488,706 (GRCm39) |
D128G |
probably damaging |
Het |
Pkp4 |
A |
T |
2: 59,172,449 (GRCm39) |
I522F |
probably damaging |
Het |
Plod3 |
G |
A |
5: 137,019,654 (GRCm39) |
A398T |
probably benign |
Het |
Pou4f3 |
A |
G |
18: 42,529,052 (GRCm39) |
M332V |
possibly damaging |
Het |
Prox1 |
A |
G |
1: 189,885,669 (GRCm39) |
F593L |
probably damaging |
Het |
Prrc2a |
G |
A |
17: 35,369,018 (GRCm39) |
P2006L |
probably damaging |
Het |
Prss50 |
A |
G |
9: 110,692,864 (GRCm39) |
D328G |
probably damaging |
Het |
Psmd6 |
C |
T |
14: 14,120,126 (GRCm38) |
S71N |
probably benign |
Het |
Ptprd |
A |
G |
4: 76,009,769 (GRCm39) |
I764T |
probably benign |
Het |
Ptprr |
C |
T |
10: 115,884,123 (GRCm39) |
A60V |
probably benign |
Het |
Raet1e |
T |
A |
10: 22,057,199 (GRCm39) |
D174E |
probably damaging |
Het |
Rbfox2 |
T |
C |
15: 76,976,018 (GRCm39) |
I308M |
probably benign |
Het |
Rnf20 |
G |
C |
4: 49,649,962 (GRCm39) |
|
probably null |
Het |
Rpap2 |
A |
T |
5: 107,768,113 (GRCm39) |
H317L |
probably benign |
Het |
Rsph6a |
T |
A |
7: 18,799,783 (GRCm39) |
Y471* |
probably null |
Het |
Sdhb |
A |
G |
4: 140,704,777 (GRCm39) |
H246R |
possibly damaging |
Het |
Sh3bp5 |
C |
A |
14: 31,099,452 (GRCm39) |
R265L |
probably benign |
Het |
Sin3b |
A |
C |
8: 73,452,271 (GRCm39) |
I126L |
probably benign |
Het |
Skint2 |
G |
A |
4: 112,509,305 (GRCm39) |
A363T |
probably benign |
Het |
Slc22a30 |
A |
G |
19: 8,321,768 (GRCm39) |
I432T |
probably benign |
Het |
Slc2a2 |
G |
A |
3: 28,771,681 (GRCm39) |
|
probably null |
Het |
Slco1a5 |
T |
C |
6: 142,194,533 (GRCm39) |
Y370C |
possibly damaging |
Het |
Sltm |
A |
G |
9: 70,496,339 (GRCm39) |
H958R |
probably damaging |
Het |
Smpdl3a |
C |
T |
10: 57,684,111 (GRCm39) |
H290Y |
probably damaging |
Het |
Snrnp40 |
A |
G |
4: 130,256,549 (GRCm39) |
I91M |
probably damaging |
Het |
Stox1 |
A |
C |
10: 62,501,516 (GRCm39) |
I348S |
probably damaging |
Het |
Sult1e1 |
A |
G |
5: 87,738,027 (GRCm39) |
V18A |
possibly damaging |
Het |
Syne2 |
A |
G |
12: 75,945,941 (GRCm39) |
M338V |
probably benign |
Het |
Tbc1d23 |
T |
A |
16: 57,012,991 (GRCm39) |
Q327L |
probably benign |
Het |
Terf2 |
G |
T |
8: 107,803,307 (GRCm39) |
H425Q |
probably benign |
Het |
Timd2 |
A |
T |
11: 46,568,094 (GRCm39) |
Y233* |
probably null |
Het |
Tmem39a |
A |
G |
16: 38,411,524 (GRCm39) |
|
probably benign |
Het |
Trappc10 |
T |
C |
10: 78,037,424 (GRCm39) |
D793G |
possibly damaging |
Het |
Ugt1a10 |
TAAAAAAAAA |
TAAAAAAA |
1: 88,143,650 (GRCm39) |
|
probably benign |
Het |
Unc93a |
T |
C |
17: 13,339,782 (GRCm39) |
|
probably null |
Het |
Utrn |
T |
C |
10: 12,625,813 (GRCm39) |
T123A |
probably damaging |
Het |
Vmn1r171 |
T |
C |
7: 23,332,369 (GRCm39) |
I198T |
probably benign |
Het |
Vmn1r213 |
T |
A |
13: 23,196,016 (GRCm39) |
S200T |
probably damaging |
Het |
Vmn2r108 |
T |
A |
17: 20,682,891 (GRCm39) |
D771V |
probably damaging |
Het |
Wls |
C |
T |
3: 159,603,082 (GRCm39) |
T165I |
probably benign |
Het |
Zc3h13 |
G |
A |
14: 75,576,863 (GRCm39) |
C1657Y |
probably damaging |
Het |
Zdhhc5 |
T |
C |
2: 84,523,775 (GRCm39) |
K224E |
probably damaging |
Het |
Zfp54 |
T |
A |
17: 21,654,402 (GRCm39) |
Y299N |
probably damaging |
Het |
Zfp820 |
A |
T |
17: 22,037,966 (GRCm39) |
L454Q |
probably benign |
Het |
Zfp960 |
T |
A |
17: 17,308,698 (GRCm39) |
F471I |
probably damaging |
Het |
Zswim5 |
A |
G |
4: 116,830,169 (GRCm39) |
I515V |
probably benign |
Het |
Zzef1 |
G |
T |
11: 72,750,449 (GRCm39) |
S919I |
probably benign |
Het |
|
Other mutations in Spag9 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00422:Spag9
|
APN |
11 |
93,988,692 (GRCm39) |
missense |
probably benign |
0.02 |
IGL01776:Spag9
|
APN |
11 |
94,007,553 (GRCm39) |
splice site |
probably benign |
|
IGL02095:Spag9
|
APN |
11 |
93,999,408 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02307:Spag9
|
APN |
11 |
93,992,986 (GRCm39) |
critical splice donor site |
probably null |
|
IGL02417:Spag9
|
APN |
11 |
94,007,567 (GRCm39) |
missense |
probably benign |
0.27 |
IGL02480:Spag9
|
APN |
11 |
93,999,413 (GRCm39) |
nonsense |
probably null |
|
IGL02864:Spag9
|
APN |
11 |
93,997,487 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02976:Spag9
|
APN |
11 |
93,974,779 (GRCm39) |
missense |
probably benign |
0.30 |
IGL02979:Spag9
|
APN |
11 |
93,988,190 (GRCm39) |
missense |
probably benign |
|
IGL03349:Spag9
|
APN |
11 |
93,984,335 (GRCm39) |
missense |
possibly damaging |
0.51 |
dazzle
|
UTSW |
11 |
93,984,450 (GRCm39) |
nonsense |
probably null |
|
R0128:Spag9
|
UTSW |
11 |
93,984,365 (GRCm39) |
missense |
probably damaging |
1.00 |
R0418:Spag9
|
UTSW |
11 |
93,982,579 (GRCm39) |
splice site |
probably benign |
|
R1463:Spag9
|
UTSW |
11 |
94,007,663 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Spag9
|
UTSW |
11 |
93,988,059 (GRCm39) |
missense |
probably damaging |
1.00 |
R1605:Spag9
|
UTSW |
11 |
93,939,365 (GRCm39) |
missense |
probably damaging |
0.99 |
R1649:Spag9
|
UTSW |
11 |
93,999,278 (GRCm39) |
splice site |
probably null |
|
R1697:Spag9
|
UTSW |
11 |
93,887,391 (GRCm39) |
missense |
probably benign |
0.00 |
R1952:Spag9
|
UTSW |
11 |
93,988,184 (GRCm39) |
missense |
possibly damaging |
0.77 |
R2011:Spag9
|
UTSW |
11 |
93,983,201 (GRCm39) |
nonsense |
probably null |
|
R2012:Spag9
|
UTSW |
11 |
93,983,201 (GRCm39) |
nonsense |
probably null |
|
R2351:Spag9
|
UTSW |
11 |
93,983,726 (GRCm39) |
missense |
probably damaging |
1.00 |
R2367:Spag9
|
UTSW |
11 |
94,007,583 (GRCm39) |
missense |
probably damaging |
1.00 |
R3027:Spag9
|
UTSW |
11 |
93,977,203 (GRCm39) |
missense |
probably null |
1.00 |
R3766:Spag9
|
UTSW |
11 |
93,951,109 (GRCm39) |
intron |
probably benign |
|
R3777:Spag9
|
UTSW |
11 |
93,989,852 (GRCm39) |
critical splice acceptor site |
probably null |
|
R3937:Spag9
|
UTSW |
11 |
93,935,305 (GRCm39) |
missense |
possibly damaging |
0.92 |
R3937:Spag9
|
UTSW |
11 |
93,935,243 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4417:Spag9
|
UTSW |
11 |
93,951,172 (GRCm39) |
intron |
probably benign |
|
R4445:Spag9
|
UTSW |
11 |
93,988,079 (GRCm39) |
missense |
possibly damaging |
0.95 |
R4711:Spag9
|
UTSW |
11 |
94,005,177 (GRCm39) |
critical splice donor site |
probably null |
|
R4799:Spag9
|
UTSW |
11 |
93,939,343 (GRCm39) |
missense |
probably damaging |
0.96 |
R4816:Spag9
|
UTSW |
11 |
93,939,425 (GRCm39) |
intron |
probably benign |
|
R4843:Spag9
|
UTSW |
11 |
93,988,644 (GRCm39) |
missense |
probably damaging |
1.00 |
R5020:Spag9
|
UTSW |
11 |
93,988,612 (GRCm39) |
missense |
probably benign |
0.08 |
R5119:Spag9
|
UTSW |
11 |
94,013,548 (GRCm39) |
missense |
probably damaging |
1.00 |
R5298:Spag9
|
UTSW |
11 |
93,990,961 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Spag9
|
UTSW |
11 |
93,959,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R5305:Spag9
|
UTSW |
11 |
93,959,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R5395:Spag9
|
UTSW |
11 |
93,982,577 (GRCm39) |
splice site |
probably null |
|
R5636:Spag9
|
UTSW |
11 |
93,959,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R5638:Spag9
|
UTSW |
11 |
93,959,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R5654:Spag9
|
UTSW |
11 |
93,981,538 (GRCm39) |
missense |
probably damaging |
1.00 |
R5779:Spag9
|
UTSW |
11 |
94,005,079 (GRCm39) |
missense |
probably benign |
0.20 |
R5814:Spag9
|
UTSW |
11 |
93,973,654 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5912:Spag9
|
UTSW |
11 |
93,935,251 (GRCm39) |
missense |
probably damaging |
0.98 |
R6038:Spag9
|
UTSW |
11 |
94,002,918 (GRCm39) |
missense |
probably damaging |
1.00 |
R6038:Spag9
|
UTSW |
11 |
94,002,918 (GRCm39) |
missense |
probably damaging |
1.00 |
R6269:Spag9
|
UTSW |
11 |
93,935,333 (GRCm39) |
missense |
probably benign |
0.05 |
R6294:Spag9
|
UTSW |
11 |
93,984,311 (GRCm39) |
critical splice acceptor site |
probably null |
|
R6389:Spag9
|
UTSW |
11 |
93,977,137 (GRCm39) |
missense |
probably damaging |
1.00 |
R6420:Spag9
|
UTSW |
11 |
93,977,128 (GRCm39) |
missense |
probably damaging |
1.00 |
R6460:Spag9
|
UTSW |
11 |
93,959,801 (GRCm39) |
missense |
probably damaging |
1.00 |
R6482:Spag9
|
UTSW |
11 |
93,984,328 (GRCm39) |
missense |
possibly damaging |
0.94 |
R6860:Spag9
|
UTSW |
11 |
93,972,196 (GRCm39) |
missense |
probably benign |
0.25 |
R7086:Spag9
|
UTSW |
11 |
93,988,690 (GRCm39) |
missense |
probably benign |
|
R7179:Spag9
|
UTSW |
11 |
93,980,258 (GRCm39) |
splice site |
probably null |
|
R7225:Spag9
|
UTSW |
11 |
93,988,184 (GRCm39) |
missense |
probably damaging |
0.98 |
R7351:Spag9
|
UTSW |
11 |
93,983,802 (GRCm39) |
missense |
probably benign |
0.00 |
R7366:Spag9
|
UTSW |
11 |
93,999,347 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7378:Spag9
|
UTSW |
11 |
94,005,177 (GRCm39) |
critical splice donor site |
probably null |
|
R7401:Spag9
|
UTSW |
11 |
93,988,515 (GRCm39) |
missense |
probably benign |
|
R7506:Spag9
|
UTSW |
11 |
93,999,290 (GRCm39) |
missense |
probably damaging |
1.00 |
R7507:Spag9
|
UTSW |
11 |
93,958,906 (GRCm39) |
missense |
probably benign |
0.00 |
R7513:Spag9
|
UTSW |
11 |
94,002,909 (GRCm39) |
missense |
probably damaging |
1.00 |
R7655:Spag9
|
UTSW |
11 |
93,887,389 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7656:Spag9
|
UTSW |
11 |
93,887,389 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7664:Spag9
|
UTSW |
11 |
93,992,986 (GRCm39) |
critical splice donor site |
probably null |
|
R7665:Spag9
|
UTSW |
11 |
93,904,480 (GRCm39) |
missense |
probably damaging |
0.98 |
R7862:Spag9
|
UTSW |
11 |
94,002,892 (GRCm39) |
missense |
possibly damaging |
0.69 |
R8074:Spag9
|
UTSW |
11 |
94,002,877 (GRCm39) |
missense |
probably damaging |
1.00 |
R8085:Spag9
|
UTSW |
11 |
93,989,870 (GRCm39) |
missense |
probably benign |
|
R8469:Spag9
|
UTSW |
11 |
93,982,627 (GRCm39) |
missense |
probably damaging |
1.00 |
R8547:Spag9
|
UTSW |
11 |
94,013,647 (GRCm39) |
missense |
possibly damaging |
0.84 |
R8709:Spag9
|
UTSW |
11 |
93,958,916 (GRCm39) |
missense |
probably benign |
0.02 |
R8732:Spag9
|
UTSW |
11 |
93,962,514 (GRCm39) |
critical splice donor site |
probably null |
|
R8899:Spag9
|
UTSW |
11 |
93,983,695 (GRCm39) |
missense |
probably damaging |
1.00 |
R8983:Spag9
|
UTSW |
11 |
93,958,815 (GRCm39) |
missense |
probably benign |
|
R9043:Spag9
|
UTSW |
11 |
93,951,085 (GRCm39) |
missense |
|
|
R9050:Spag9
|
UTSW |
11 |
93,935,294 (GRCm39) |
missense |
probably damaging |
0.97 |
R9502:Spag9
|
UTSW |
11 |
93,959,792 (GRCm39) |
missense |
probably damaging |
1.00 |
R9575:Spag9
|
UTSW |
11 |
93,962,409 (GRCm39) |
missense |
probably damaging |
0.99 |
R9667:Spag9
|
UTSW |
11 |
93,887,119 (GRCm39) |
missense |
possibly damaging |
0.83 |
R9683:Spag9
|
UTSW |
11 |
93,988,568 (GRCm39) |
missense |
probably damaging |
1.00 |
R9774:Spag9
|
UTSW |
11 |
94,005,062 (GRCm39) |
missense |
probably damaging |
0.96 |
|
Predicted Primers |
PCR Primer
(F):5'- TTTCTATCCACAGCCCAGGC -3'
(R):5'- TGTGAACTACAGTCACTGTGG -3'
Sequencing Primer
(F):5'- GCCCAGGCTTAAAATCACGAC -3'
(R):5'- CTCTTCTATCATGTAGGTCCTGAGG -3'
|
Posted On |
2016-02-04 |