Incidental Mutation 'R4823:Rapgef6'
ID |
371314 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Rapgef6
|
Ensembl Gene |
ENSMUSG00000037533 |
Gene Name |
Rap guanine nucleotide exchange factor (GEF) 6 |
Synonyms |
PDZ-GEF2, C030018K18Rik, Pdzgef2, RA-GEF-2 |
MMRRC Submission |
042439-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R4823 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
54413673-54590111 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 54585326 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Valine
at position 1570
(I1570V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000099804
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000101206]
[ENSMUST00000102743]
[ENSMUST00000207429]
|
AlphaFold |
Q5NCJ1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000101206
AA Change: I1578V
PolyPhen 2
Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)
|
SMART Domains |
Protein: ENSMUSP00000098766 Gene: ENSMUSG00000037533 AA Change: I1578V
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.45e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1095 |
5.35e-87 |
SMART |
low complexity region
|
1237 |
1250 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1293 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1368 |
1380 |
N/A |
INTRINSIC |
low complexity region
|
1444 |
1452 |
N/A |
INTRINSIC |
low complexity region
|
1555 |
1568 |
N/A |
INTRINSIC |
low complexity region
|
1591 |
1604 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000102743
AA Change: I1570V
PolyPhen 2
Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)
|
SMART Domains |
Protein: ENSMUSP00000099804 Gene: ENSMUSG00000037533 AA Change: I1570V
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.42e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1138 |
3.88e-84 |
SMART |
low complexity region
|
1229 |
1242 |
N/A |
INTRINSIC |
low complexity region
|
1262 |
1285 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1356 |
N/A |
INTRINSIC |
low complexity region
|
1360 |
1372 |
N/A |
INTRINSIC |
low complexity region
|
1436 |
1444 |
N/A |
INTRINSIC |
low complexity region
|
1547 |
1560 |
N/A |
INTRINSIC |
low complexity region
|
1583 |
1596 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000136494
|
SMART Domains |
Protein: ENSMUSP00000114574 Gene: ENSMUSG00000037533
Domain | Start | End | E-Value | Type |
low complexity region
|
47 |
55 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000207429
AA Change: I1575V
PolyPhen 2
Score 0.044 (Sensitivity: 0.94; Specificity: 0.83)
|
Meta Mutation Damage Score |
0.0583 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 96.8%
- 20x: 94.1%
|
Validation Efficiency |
98% (96/98) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit an inlarged spleen, increased IgE and IgG levels and altered cytokine production. [provided by MGI curators]
|
Allele List at MGI |
All alleles(16) : Targeted, knock-out(1) Targeted, other(2) Gene trapped(13) |
Other mutations in this stock |
Total: 88 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2310003L06Rik |
G |
A |
5: 88,120,457 (GRCm39) |
D405N |
probably benign |
Het |
4921517D22Rik |
T |
G |
13: 59,838,718 (GRCm39) |
E38A |
probably damaging |
Het |
4930433I11Rik |
A |
T |
7: 40,642,786 (GRCm39) |
I152F |
probably benign |
Het |
Aass |
A |
T |
6: 23,107,690 (GRCm39) |
D364E |
probably benign |
Het |
Adamts2 |
A |
G |
11: 50,628,014 (GRCm39) |
D238G |
probably benign |
Het |
Albfm1 |
T |
A |
5: 90,714,362 (GRCm39) |
L124H |
probably benign |
Het |
Aoc1l1 |
A |
G |
6: 48,952,195 (GRCm39) |
D40G |
probably damaging |
Het |
Aplf |
G |
A |
6: 87,623,237 (GRCm39) |
L302F |
probably damaging |
Het |
Apol7b |
G |
T |
15: 77,311,982 (GRCm39) |
|
probably benign |
Het |
Arhgef12 |
A |
G |
9: 42,931,992 (GRCm39) |
V165A |
probably benign |
Het |
Ascc3 |
T |
C |
10: 50,589,329 (GRCm39) |
S1017P |
probably damaging |
Het |
B230104I21Rik |
T |
A |
4: 154,434,204 (GRCm39) |
|
probably benign |
Het |
Bfsp2 |
C |
A |
9: 103,357,082 (GRCm39) |
C115F |
probably damaging |
Het |
Bhmt2 |
A |
T |
13: 93,799,798 (GRCm39) |
W213R |
probably benign |
Het |
Capn5 |
A |
T |
7: 97,775,648 (GRCm39) |
V431E |
probably damaging |
Het |
Ccdc88c |
A |
G |
12: 100,896,802 (GRCm39) |
Y1390H |
probably damaging |
Het |
Ccr3 |
A |
G |
9: 123,828,718 (GRCm39) |
T18A |
probably damaging |
Het |
Cdh5 |
T |
C |
8: 104,869,301 (GRCm39) |
S676P |
probably benign |
Het |
Ceacam5 |
A |
G |
7: 17,491,669 (GRCm39) |
T680A |
possibly damaging |
Het |
Cebpd |
G |
A |
16: 15,705,978 (GRCm39) |
G264S |
probably benign |
Het |
Cfd |
T |
C |
10: 79,726,782 (GRCm39) |
V8A |
probably benign |
Het |
Cops9 |
C |
T |
1: 92,569,588 (GRCm39) |
|
probably benign |
Het |
Cpne6 |
T |
C |
14: 55,754,467 (GRCm39) |
Y533H |
probably damaging |
Het |
Cyp2c67 |
T |
A |
19: 39,604,168 (GRCm39) |
H396L |
probably benign |
Het |
Cyp2j9 |
G |
A |
4: 96,456,972 (GRCm39) |
P500S |
possibly damaging |
Het |
Cyp4a12a |
A |
T |
4: 115,184,610 (GRCm39) |
|
probably null |
Het |
Dbt |
G |
A |
3: 116,317,036 (GRCm39) |
D71N |
probably damaging |
Het |
Ddx41 |
G |
T |
13: 55,679,868 (GRCm39) |
Q440K |
probably benign |
Het |
Elovl4 |
A |
G |
9: 83,662,738 (GRCm39) |
F174S |
probably damaging |
Het |
Emcn |
C |
G |
3: 137,129,187 (GRCm39) |
P193R |
probably damaging |
Het |
Etnk1 |
T |
C |
6: 143,113,364 (GRCm39) |
|
probably null |
Het |
Fads3 |
A |
C |
19: 10,019,252 (GRCm39) |
S53R |
probably damaging |
Het |
Fam193a |
A |
G |
5: 34,616,372 (GRCm39) |
E849G |
probably damaging |
Het |
Fat3 |
A |
G |
9: 15,907,803 (GRCm39) |
V2733A |
probably benign |
Het |
Frem3 |
T |
A |
8: 81,340,587 (GRCm39) |
M960K |
probably benign |
Het |
Frmd6 |
A |
T |
12: 70,919,349 (GRCm39) |
I62L |
probably benign |
Het |
Glmp |
T |
C |
3: 88,232,530 (GRCm39) |
|
probably benign |
Het |
Gm17421 |
T |
C |
12: 113,333,161 (GRCm39) |
|
noncoding transcript |
Het |
Gm27013 |
T |
A |
6: 130,499,186 (GRCm39) |
|
noncoding transcript |
Het |
Gtf2ird1 |
A |
G |
5: 134,424,576 (GRCm39) |
V390A |
probably damaging |
Het |
Hps3 |
A |
G |
3: 20,066,890 (GRCm39) |
Y559H |
probably benign |
Het |
Hsh2d |
G |
A |
8: 72,954,304 (GRCm39) |
D229N |
probably benign |
Het |
Itpr3 |
A |
G |
17: 27,304,121 (GRCm39) |
D114G |
probably benign |
Het |
Jmjd4 |
G |
A |
11: 59,346,406 (GRCm39) |
A408T |
probably benign |
Het |
Kcnh4 |
G |
T |
11: 100,646,000 (GRCm39) |
A316D |
probably damaging |
Het |
Klrg1 |
T |
A |
6: 122,250,492 (GRCm39) |
|
probably null |
Het |
Lancl2 |
T |
A |
6: 57,709,262 (GRCm39) |
Y355N |
probably damaging |
Het |
Ltb |
T |
C |
17: 35,414,206 (GRCm39) |
S115P |
probably benign |
Het |
Mccc2 |
T |
G |
13: 100,136,762 (GRCm39) |
R64S |
probably benign |
Het |
Mgam2-ps |
T |
A |
6: 40,809,596 (GRCm39) |
|
noncoding transcript |
Het |
Mrrf |
T |
G |
2: 36,038,042 (GRCm39) |
N104K |
possibly damaging |
Het |
Nipa1 |
C |
A |
7: 55,629,436 (GRCm39) |
V226L |
possibly damaging |
Het |
Numa1 |
T |
A |
7: 101,645,244 (GRCm39) |
L290Q |
probably damaging |
Het |
Ofcc1 |
T |
A |
13: 40,433,949 (GRCm39) |
H52L |
probably damaging |
Het |
Ogfod3 |
G |
A |
11: 121,086,027 (GRCm39) |
A189V |
probably benign |
Het |
Or14c39 |
T |
A |
7: 86,343,796 (GRCm39) |
I44N |
probably damaging |
Het |
Or5b21 |
A |
T |
19: 12,839,180 (GRCm39) |
I14F |
probably benign |
Het |
Or5d46 |
A |
G |
2: 88,170,179 (GRCm39) |
D90G |
probably damaging |
Het |
Or9i1b |
G |
A |
19: 13,897,022 (GRCm39) |
V213I |
probably benign |
Het |
P2ry12 |
G |
A |
3: 59,125,318 (GRCm39) |
S119L |
probably benign |
Het |
Pde7b |
T |
A |
10: 20,314,531 (GRCm39) |
N192Y |
probably damaging |
Het |
Pfkl |
T |
C |
10: 77,833,428 (GRCm39) |
N258S |
probably damaging |
Het |
Phykpl |
G |
A |
11: 51,477,420 (GRCm39) |
A71T |
probably damaging |
Het |
Ppp1r16a |
T |
C |
15: 76,577,393 (GRCm39) |
|
probably benign |
Het |
Pramel15 |
T |
C |
4: 144,099,781 (GRCm39) |
N328S |
possibly damaging |
Het |
Pramel32 |
T |
C |
4: 88,547,452 (GRCm39) |
K160R |
probably damaging |
Het |
Prune2 |
C |
T |
19: 17,097,868 (GRCm39) |
T1124M |
probably damaging |
Het |
Rbm34 |
T |
C |
8: 127,697,655 (GRCm39) |
S19G |
probably benign |
Het |
Rnf10 |
T |
C |
5: 115,393,501 (GRCm39) |
|
probably null |
Het |
Rnf34 |
A |
G |
5: 122,988,365 (GRCm39) |
|
probably null |
Het |
Setd4 |
A |
G |
16: 93,386,838 (GRCm39) |
S287P |
probably benign |
Het |
Shc3 |
C |
T |
13: 51,605,606 (GRCm39) |
V225I |
probably benign |
Het |
Sipa1l3 |
C |
T |
7: 29,070,427 (GRCm39) |
V1030I |
probably damaging |
Het |
Siva1 |
G |
T |
12: 112,611,498 (GRCm39) |
R33L |
probably damaging |
Het |
Slc4a5 |
C |
T |
6: 83,249,115 (GRCm39) |
T573I |
probably damaging |
Het |
Sorcs1 |
C |
T |
19: 50,666,578 (GRCm39) |
R110Q |
possibly damaging |
Het |
Sorcs1 |
T |
C |
19: 50,218,740 (GRCm39) |
I581V |
possibly damaging |
Het |
Sorl1 |
T |
C |
9: 41,903,617 (GRCm39) |
D1545G |
probably damaging |
Het |
Tas2r124 |
T |
G |
6: 132,732,509 (GRCm39) |
S273A |
probably damaging |
Het |
Tcf15 |
T |
C |
2: 151,985,813 (GRCm39) |
F90L |
probably damaging |
Het |
Trim59 |
G |
A |
3: 68,944,453 (GRCm39) |
R296C |
probably benign |
Het |
Tulp1 |
A |
T |
17: 28,572,546 (GRCm39) |
D229E |
probably benign |
Het |
Ush1c |
T |
A |
7: 45,845,157 (GRCm39) |
N886I |
probably benign |
Het |
Usp9y |
A |
T |
Y: 1,444,559 (GRCm39) |
S127T |
probably damaging |
Het |
Vmn1r19 |
T |
A |
6: 57,382,219 (GRCm39) |
Y257* |
probably null |
Het |
Vmn2r109 |
A |
T |
17: 20,774,153 (GRCm39) |
Y401N |
probably damaging |
Het |
Vmn2r69 |
A |
C |
7: 85,060,508 (GRCm39) |
S359A |
probably benign |
Het |
Zfp37 |
A |
T |
4: 62,109,740 (GRCm39) |
N479K |
probably benign |
Het |
|
Other mutations in Rapgef6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00436:Rapgef6
|
APN |
11 |
54,570,091 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00507:Rapgef6
|
APN |
11 |
54,554,935 (GRCm39) |
nonsense |
probably null |
|
IGL00809:Rapgef6
|
APN |
11 |
54,540,126 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00843:Rapgef6
|
APN |
11 |
54,582,099 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00899:Rapgef6
|
APN |
11 |
54,510,844 (GRCm39) |
nonsense |
probably null |
|
IGL01372:Rapgef6
|
APN |
11 |
54,559,437 (GRCm39) |
splice site |
probably benign |
|
IGL01604:Rapgef6
|
APN |
11 |
54,585,389 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01935:Rapgef6
|
APN |
11 |
54,501,668 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL01991:Rapgef6
|
APN |
11 |
54,443,695 (GRCm39) |
missense |
probably benign |
0.37 |
IGL02243:Rapgef6
|
APN |
11 |
54,567,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02407:Rapgef6
|
APN |
11 |
54,567,181 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02676:Rapgef6
|
APN |
11 |
54,540,172 (GRCm39) |
unclassified |
probably benign |
|
IGL02934:Rapgef6
|
APN |
11 |
54,516,690 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03076:Rapgef6
|
APN |
11 |
54,516,793 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03110:Rapgef6
|
APN |
11 |
54,586,915 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03256:Rapgef6
|
APN |
11 |
54,548,255 (GRCm39) |
missense |
probably damaging |
1.00 |
shocker
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
D4216:Rapgef6
|
UTSW |
11 |
54,559,572 (GRCm39) |
splice site |
probably benign |
|
PIT4305001:Rapgef6
|
UTSW |
11 |
54,570,203 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4366001:Rapgef6
|
UTSW |
11 |
54,582,446 (GRCm39) |
missense |
probably damaging |
0.98 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0125:Rapgef6
|
UTSW |
11 |
54,516,701 (GRCm39) |
nonsense |
probably null |
|
R0189:Rapgef6
|
UTSW |
11 |
54,582,075 (GRCm39) |
missense |
probably benign |
|
R0201:Rapgef6
|
UTSW |
11 |
54,510,767 (GRCm39) |
missense |
probably damaging |
1.00 |
R0505:Rapgef6
|
UTSW |
11 |
54,516,789 (GRCm39) |
missense |
probably benign |
0.00 |
R0524:Rapgef6
|
UTSW |
11 |
54,581,110 (GRCm39) |
missense |
probably benign |
0.32 |
R0853:Rapgef6
|
UTSW |
11 |
54,559,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R1203:Rapgef6
|
UTSW |
11 |
54,582,525 (GRCm39) |
missense |
probably benign |
0.09 |
R1440:Rapgef6
|
UTSW |
11 |
54,517,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R1453:Rapgef6
|
UTSW |
11 |
54,530,553 (GRCm39) |
splice site |
probably null |
|
R1530:Rapgef6
|
UTSW |
11 |
54,552,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1620:Rapgef6
|
UTSW |
11 |
54,517,420 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1628:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1629:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1630:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1634:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1640:Rapgef6
|
UTSW |
11 |
54,548,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1686:Rapgef6
|
UTSW |
11 |
54,582,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1722:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1743:Rapgef6
|
UTSW |
11 |
54,567,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R1816:Rapgef6
|
UTSW |
11 |
54,585,314 (GRCm39) |
missense |
probably benign |
|
R1851:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1852:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1868:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1942:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1943:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2031:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.30 |
R2087:Rapgef6
|
UTSW |
11 |
54,522,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R2106:Rapgef6
|
UTSW |
11 |
54,559,512 (GRCm39) |
missense |
probably benign |
0.17 |
R2362:Rapgef6
|
UTSW |
11 |
54,585,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R2484:Rapgef6
|
UTSW |
11 |
54,533,582 (GRCm39) |
missense |
possibly damaging |
0.48 |
R2566:Rapgef6
|
UTSW |
11 |
54,578,537 (GRCm39) |
missense |
possibly damaging |
0.66 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R3744:Rapgef6
|
UTSW |
11 |
54,516,760 (GRCm39) |
missense |
probably benign |
0.40 |
R3848:Rapgef6
|
UTSW |
11 |
54,582,134 (GRCm39) |
missense |
probably damaging |
0.97 |
R4859:Rapgef6
|
UTSW |
11 |
54,526,989 (GRCm39) |
missense |
probably benign |
|
R4906:Rapgef6
|
UTSW |
11 |
54,443,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4911:Rapgef6
|
UTSW |
11 |
54,513,143 (GRCm39) |
missense |
probably damaging |
0.97 |
R4937:Rapgef6
|
UTSW |
11 |
54,548,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R5033:Rapgef6
|
UTSW |
11 |
54,582,207 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5249:Rapgef6
|
UTSW |
11 |
54,413,943 (GRCm39) |
missense |
probably benign |
0.19 |
R5304:Rapgef6
|
UTSW |
11 |
54,548,200 (GRCm39) |
missense |
probably benign |
0.01 |
R5656:Rapgef6
|
UTSW |
11 |
54,526,962 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5701:Rapgef6
|
UTSW |
11 |
54,567,220 (GRCm39) |
missense |
possibly damaging |
0.76 |
R5758:Rapgef6
|
UTSW |
11 |
54,559,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Rapgef6
|
UTSW |
11 |
54,530,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R6177:Rapgef6
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Rapgef6
|
UTSW |
11 |
54,540,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R6287:Rapgef6
|
UTSW |
11 |
54,517,164 (GRCm39) |
splice site |
probably null |
|
R6293:Rapgef6
|
UTSW |
11 |
54,525,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Rapgef6
|
UTSW |
11 |
54,582,563 (GRCm39) |
missense |
probably damaging |
0.99 |
R6863:Rapgef6
|
UTSW |
11 |
54,437,206 (GRCm39) |
missense |
probably benign |
0.00 |
R6950:Rapgef6
|
UTSW |
11 |
54,567,206 (GRCm39) |
missense |
probably benign |
0.09 |
R7144:Rapgef6
|
UTSW |
11 |
54,548,191 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7171:Rapgef6
|
UTSW |
11 |
54,567,189 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7199:Rapgef6
|
UTSW |
11 |
54,437,252 (GRCm39) |
missense |
probably benign |
0.00 |
R7291:Rapgef6
|
UTSW |
11 |
54,582,065 (GRCm39) |
missense |
probably benign |
0.05 |
R7436:Rapgef6
|
UTSW |
11 |
54,501,747 (GRCm39) |
critical splice donor site |
probably null |
|
R7498:Rapgef6
|
UTSW |
11 |
54,510,830 (GRCm39) |
missense |
probably damaging |
1.00 |
R7506:Rapgef6
|
UTSW |
11 |
54,526,997 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Rapgef6
|
UTSW |
11 |
54,525,787 (GRCm39) |
missense |
unknown |
|
R7646:Rapgef6
|
UTSW |
11 |
54,516,780 (GRCm39) |
missense |
probably benign |
0.00 |
R7655:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7656:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7687:Rapgef6
|
UTSW |
11 |
54,551,901 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7768:Rapgef6
|
UTSW |
11 |
54,517,414 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Rapgef6
|
UTSW |
11 |
54,585,225 (GRCm39) |
missense |
probably damaging |
1.00 |
R7890:Rapgef6
|
UTSW |
11 |
54,517,549 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Rapgef6
|
UTSW |
11 |
54,516,784 (GRCm39) |
missense |
probably benign |
0.03 |
R8337:Rapgef6
|
UTSW |
11 |
54,522,127 (GRCm39) |
nonsense |
probably null |
|
R8393:Rapgef6
|
UTSW |
11 |
54,578,487 (GRCm39) |
missense |
probably benign |
|
R8465:Rapgef6
|
UTSW |
11 |
54,582,308 (GRCm39) |
missense |
probably benign |
0.00 |
R8492:Rapgef6
|
UTSW |
11 |
54,581,063 (GRCm39) |
missense |
probably damaging |
0.99 |
R8791:Rapgef6
|
UTSW |
11 |
54,459,295 (GRCm39) |
missense |
probably benign |
0.15 |
R8866:Rapgef6
|
UTSW |
11 |
54,443,700 (GRCm39) |
critical splice donor site |
probably null |
|
R8917:Rapgef6
|
UTSW |
11 |
54,582,392 (GRCm39) |
nonsense |
probably null |
|
R8921:Rapgef6
|
UTSW |
11 |
54,570,065 (GRCm39) |
missense |
probably benign |
0.09 |
R9031:Rapgef6
|
UTSW |
11 |
54,578,667 (GRCm39) |
missense |
probably benign |
0.00 |
R9093:Rapgef6
|
UTSW |
11 |
54,487,912 (GRCm39) |
nonsense |
probably null |
|
R9354:Rapgef6
|
UTSW |
11 |
54,510,749 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9514:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.14 |
R9516:Rapgef6
|
UTSW |
11 |
54,582,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R9739:Rapgef6
|
UTSW |
11 |
54,513,189 (GRCm39) |
missense |
probably benign |
0.03 |
R9789:Rapgef6
|
UTSW |
11 |
54,540,097 (GRCm39) |
missense |
probably benign |
0.03 |
|
Predicted Primers |
PCR Primer
(F):5'- GTGATAGGTATAGGGAGCCACC -3'
(R):5'- AACGTAGGCTGCCAGGTTTG -3'
Sequencing Primer
(F):5'- GCCCACTCCTCCAGGATATCTG -3'
(R):5'- CTTAGTAGTGCTGGAGACTGACCC -3'
|
Posted On |
2016-03-01 |